Click here to switch to the map view.

The map label for this gene is ydjR [C]

Identifier: 91782879

GI number: 91782879

Start: 1668924

End: 1669562

Strand: Direct

Name: ydjR [C]

Synonym: Bxe_A2944

Alternate gene names: 91782879

Gene position: 1668924-1669562 (Clockwise)

Preceding gene: 91782878

Following gene: 91782880

Centisome position: 34.09

GC content: 69.8

Gene sequence:

>639_bases
GTGGCGCTTCACGGCACGCTCGTGGTCAGCGGGGCAACCGTCACGCTGATTCGCGGCGCCGAACTCGTGGCGGCGCCCTG
GAAGAACGGCGGCGGCGTCACGCGCGAGGTGGCGGCGTTCCCCGAAGGCGCGGGGCTCGATGCTTTCGTGTGGCGGGTGA
GCGTGGCCGATGTCGCGCAAGCCGGGCCGTTCTCGCGCTTTGCCGGCATTGATCGCACGCTCGTGTTGTTGTCCGGCGCG
GGCATGTTGCTCGACGAAGCCGGCGACGGGCGCGGTGCGCACGGCGTGAAGACATACGCGTTGACGCAAGCGCTCGACAT
GGCGCATTTCACCGGCGAGGCGCGCATCGACGCGCGCCTCGTCGATGGCGCCACGCGCGACTTCAACCTGATGGTGCGTC
GCGACGCGGCGCAGGGCGAAGTGGAAGTGTGGCGGGGCGCCACGCAGCGCACGCTGTCCACGGACGCGGTGCTCCTGTAC
TGCGCGCAGGGCTTGGTGTCGGTCACGCCCGGCGACGCGCAGCCGCTGCCGCTCGAAACCGGCGACACGCTGCGCATCGA
TACGCCGCACGCGCTGTCATGCGCGGTGAAAGGCGAGGGCGCCTTGCTCGCGATCAACATCCGCTACGCAAAAAGATGA

Upstream 100 bases:

>100_bases
CGGCTACCGGCGTGATGCGTCACGCGGATGCGGGCTATGAACTCGCGCAGCAAACCGCGCGCGAGGCTGGTCTCAATCTG
CCGATGCTGGGCCGCTGATC

Downstream 100 bases:

>100_bases
CGACGAGTCGCGTGCACGCTCGCCAATGTCAGGGAGCGCGCACGCGAACCACCACGGACACGCAACAAGCTGCAAAGAGC
ACGCGATGAAGCAAACCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MALHGTLVVSGATVTLIRGAELVAAPWKNGGGVTREVAAFPEGAGLDAFVWRVSVADVAQAGPFSRFAGIDRTLVLLSGA
GMLLDEAGDGRGAHGVKTYALTQALDMAHFTGEARIDARLVDGATRDFNLMVRRDAAQGEVEVWRGATQRTLSTDAVLLY
CAQGLVSVTPGDAQPLPLETGDTLRIDTPHALSCAVKGEGALLAINIRYAKR

Sequences:

>Translated_212_residues
MALHGTLVVSGATVTLIRGAELVAAPWKNGGGVTREVAAFPEGAGLDAFVWRVSVADVAQAGPFSRFAGIDRTLVLLSGA
GMLLDEAGDGRGAHGVKTYALTQALDMAHFTGEARIDARLVDGATRDFNLMVRRDAAQGEVEVWRGATQRTLSTDAVLLY
CAQGLVSVTPGDAQPLPLETGDTLRIDTPHALSCAVKGEGALLAINIRYAKR
>Mature_211_residues
ALHGTLVVSGATVTLIRGAELVAAPWKNGGGVTREVAAFPEGAGLDAFVWRVSVADVAQAGPFSRFAGIDRTLVLLSGAG
MLLDEAGDGRGAHGVKTYALTQALDMAHFTGEARIDARLVDGATRDFNLMVRRDAAQGEVEVWRGATQRTLSTDAVLLYC
AQGLVSVTPGDAQPLPLETGDTLRIDTPHALSCAVKGEGALLAINIRYAKR

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=129, Percent_Identity=34.1085271317829, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 22182; Mature: 22050

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALHGTLVVSGATVTLIRGAELVAAPWKNGGGVTREVAAFPEGAGLDAFVWRVSVADVAQ
CCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEHHHHHC
AGPFSRFAGIDRTLVLLSGAGMLLDEAGDGRGAHGVKTYALTQALDMAHFTGEARIDARL
CCCCHHHHCCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
VDGATRDFNLMVRRDAAQGEVEVWRGATQRTLSTDAVLLYCAQGLVSVTPGDAQPLPLET
ECCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCHHEEEECCCCEEECCCCCCCCCCCC
GDTLRIDTPHALSCAVKGEGALLAINIRYAKR
CCEEEEECCCEEEEEEECCCEEEEEEEEEECC
>Mature Secondary Structure 
ALHGTLVVSGATVTLIRGAELVAAPWKNGGGVTREVAAFPEGAGLDAFVWRVSVADVAQ
CEEEEEEECCCEEEEEECCEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEHHHHHC
AGPFSRFAGIDRTLVLLSGAGMLLDEAGDGRGAHGVKTYALTQALDMAHFTGEARIDARL
CCCCHHHHCCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
VDGATRDFNLMVRRDAAQGEVEVWRGATQRTLSTDAVLLYCAQGLVSVTPGDAQPLPLET
ECCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCHHEEEECCCCEEECCCCCCCCCCCC
GDTLRIDTPHALSCAVKGEGALLAINIRYAKR
CCEEEEECCCEEEEEEECCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]