| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782853
Identifier: 91782853
GI number: 91782853
Start: 1636236
End: 1637654
Strand: Direct
Name: 91782853
Synonym: Bxe_A2972
Alternate gene names: NA
Gene position: 1636236-1637654 (Clockwise)
Preceding gene: 91782852
Following gene: 91782854
Centisome position: 33.42
GC content: 64.9
Gene sequence:
>1419_bases ATGGCCGTGAATACCGCAGCCGTGGAAAACAATCCGGGCGCATCGAAACCGCGCCACGCGCATCCGTTCGGCAATCTCGG ACGTGTGCGCCGCTTTCTGGCGCCCGCGGTGGCGCGGCCGTTTGCGATCGTGGAGACCGTCGTGCTCGTGCTGGTCGTGC TGGCCGTGGCCCGCTGGCTTCATCCGGAAGACCCGTTGCTGTTGCGCGCCGGTTTTCCGTGGCTGTGGCTGGTGTCGTTG CTGGTGGCCTTGCGGTACGGCAGCCTGCTCGGTCTGCTGAGCGGGGCTTTCATACTCGGCGCATGGGCGCTGTTCTATCC GCATGGCGGCCCGTTCCCCACGCTGTATTTCGCGGGCGGCCTGATCCAGACGATTCTCGCCGGACATTTCGGCGACACGT GGGGCAGCCGCGCGCAACGCGCGTCCTCGCTGAACGATTATCTGAACGACCGTCTCGTCGCTTTGACCAACAGTCACTAC CTGATGCGCCTGTCGCACGAGCGGCTCGAAAAGGATCTGCTTTCGCGGCCCACCACGCTGCGCGATTCGATTACCGAATT GCGCCGGCTATCGGTCTCCAGCGAGACGGCGCTCGCCGTGCCGGCGGTTGCCAGAGAGGGGCACCCGCTGGGCGGCGCGA GCGGTTTGCTCGAATTCGTCGCGCAGGCCTGCCAGATCGAAGTCGCCGCGCTGTACCCGGTGCGTGACAACAAGCTCGAC AGCGAGGCGATCGGCCGGATCGGCGATCCGTTCGAACTCGAAGTACACGACGAACTGGTGATGCATGCGCTCAACACGCT GAGCGTCGCGCATCTGAAGAACGAAGACACGGTCGTGCCGGTCAGCCAGTACCTGGTCTGCGCGCCGCTGGTGTCGGCGG ACGGTGAACTGCGCGCGCTGCTCGTCGTCAAGCGCATGCCGTTCCTGTCGCTCAACTTCGACAACCTGCAATTGCTGCTG GTGTTGCTCGGTTATTACGCCGACGGCGTCGAGCATTCCGCCTTCGTGCAGCGCATTCTCGACAGCGTGCCGAATTGCCC GTACGAATTCGCGCTCGATCTGAGCCGCCTCGCGCGTCTTCAGCAGAAGGCGGGGGTAGCGTCGTCACTCGTCGCGCTGG CGTTTCCGCGCGACGAAGAGGGCGACTCGCTGTTCGAGCATGTGATGCGCCGCCGCCGTTCGCTCGACGTGATGTGGCCG GTGCAGACGGCGAAGCAGTCGGTACTGGTGAATCTGATGCCCGCCACCGACACGACCGGTATCGACGGCTATCTGGCCCG GATCGAAGCCAGCCTGACGGCGCAGTTCAACACCGACCTGGAGCGTGCGCGCGTAGGTGTTCATACGCTCCACCTGGAGG GCGACGAGCCCGGCGCGGCGCTGATGCGCCTTCTCAAACGAAGCGGCCTCGATGTCTAA
Upstream 100 bases:
>100_bases CCTGTCGCCGTTGCAAGCGCGTCAGTAAGCTTATCCCCAAGGTTGCCGGCCGGCGCCCGAAACACGGGCCGCGAACCGGC ACCCGACATGTGAAAAGGAA
Downstream 100 bases:
>100_bases GACCCTTTCTTTCATCGTCGGCGCGCTGGCGGCCGTGGTGGCCGTGATCGTGCAATACCTGGCGATCGCGAGCCTGCTGC AACCGGCCGGCGCGATCGAC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Polysaccharide Transporter Component Transmembrane Protein
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MAVNTAAVENNPGASKPRHAHPFGNLGRVRRFLAPAVARPFAIVETVVLVLVVLAVARWLHPEDPLLLRAGFPWLWLVSL LVALRYGSLLGLLSGAFILGAWALFYPHGGPFPTLYFAGGLIQTILAGHFGDTWGSRAQRASSLNDYLNDRLVALTNSHY LMRLSHERLEKDLLSRPTTLRDSITELRRLSVSSETALAVPAVAREGHPLGGASGLLEFVAQACQIEVAALYPVRDNKLD SEAIGRIGDPFELEVHDELVMHALNTLSVAHLKNEDTVVPVSQYLVCAPLVSADGELRALLVVKRMPFLSLNFDNLQLLL VLLGYYADGVEHSAFVQRILDSVPNCPYEFALDLSRLARLQQKAGVASSLVALAFPRDEEGDSLFEHVMRRRRSLDVMWP VQTAKQSVLVNLMPATDTTGIDGYLARIEASLTAQFNTDLERARVGVHTLHLEGDEPGAALMRLLKRSGLDV
Sequences:
>Translated_472_residues MAVNTAAVENNPGASKPRHAHPFGNLGRVRRFLAPAVARPFAIVETVVLVLVVLAVARWLHPEDPLLLRAGFPWLWLVSL LVALRYGSLLGLLSGAFILGAWALFYPHGGPFPTLYFAGGLIQTILAGHFGDTWGSRAQRASSLNDYLNDRLVALTNSHY LMRLSHERLEKDLLSRPTTLRDSITELRRLSVSSETALAVPAVAREGHPLGGASGLLEFVAQACQIEVAALYPVRDNKLD SEAIGRIGDPFELEVHDELVMHALNTLSVAHLKNEDTVVPVSQYLVCAPLVSADGELRALLVVKRMPFLSLNFDNLQLLL VLLGYYADGVEHSAFVQRILDSVPNCPYEFALDLSRLARLQQKAGVASSLVALAFPRDEEGDSLFEHVMRRRRSLDVMWP VQTAKQSVLVNLMPATDTTGIDGYLARIEASLTAQFNTDLERARVGVHTLHLEGDEPGAALMRLLKRSGLDV >Mature_471_residues AVNTAAVENNPGASKPRHAHPFGNLGRVRRFLAPAVARPFAIVETVVLVLVVLAVARWLHPEDPLLLRAGFPWLWLVSLL VALRYGSLLGLLSGAFILGAWALFYPHGGPFPTLYFAGGLIQTILAGHFGDTWGSRAQRASSLNDYLNDRLVALTNSHYL MRLSHERLEKDLLSRPTTLRDSITELRRLSVSSETALAVPAVAREGHPLGGASGLLEFVAQACQIEVAALYPVRDNKLDS EAIGRIGDPFELEVHDELVMHALNTLSVAHLKNEDTVVPVSQYLVCAPLVSADGELRALLVVKRMPFLSLNFDNLQLLLV LLGYYADGVEHSAFVQRILDSVPNCPYEFALDLSRLARLQQKAGVASSLVALAFPRDEEGDSLFEHVMRRRRSLDVMWPV QTAKQSVLVNLMPATDTTGIDGYLARIEASLTAQFNTDLERARVGVHTLHLEGDEPGAALMRLLKRSGLDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51756; Mature: 51625
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNTAAVENNPGASKPRHAHPFGNLGRVRRFLAPAVARPFAIVETVVLVLVVLAVARWL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPEDPLLLRAGFPWLWLVSLLVALRYGSLLGLLSGAFILGAWALFYPHGGPFPTLYFAGG CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LIQTILAGHFGDTWGSRAQRASSLNDYLNDRLVALTNSHYLMRLSHERLEKDLLSRPTTL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHCCCCHH RDSITELRRLSVSSETALAVPAVAREGHPLGGASGLLEFVAQACQIEVAALYPVRDNKLD HHHHHHHHHHCCCCCCCEECHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEEEECCCCCCC SEAIGRIGDPFELEVHDELVMHALNTLSVAHLKNEDTVVPVSQYLVCAPLVSADGELRAL HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCHHHH LVVKRMPFLSLNFDNLQLLLVLLGYYADGVEHSAFVQRILDSVPNCPYEFALDLSRLARL HHHHHCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QQKAGVASSLVALAFPRDEEGDSLFEHVMRRRRSLDVMWPVQTAKQSVLVNLMPATDTTG HHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHEEEEEECCCCCCC IDGYLARIEASLTAQFNTDLERARVGVHTLHLEGDEPGAALMRLLKRSGLDV CCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure AVNTAAVENNPGASKPRHAHPFGNLGRVRRFLAPAVARPFAIVETVVLVLVVLAVARWL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPEDPLLLRAGFPWLWLVSLLVALRYGSLLGLLSGAFILGAWALFYPHGGPFPTLYFAGG CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LIQTILAGHFGDTWGSRAQRASSLNDYLNDRLVALTNSHYLMRLSHERLEKDLLSRPTTL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHCCCCHH RDSITELRRLSVSSETALAVPAVAREGHPLGGASGLLEFVAQACQIEVAALYPVRDNKLD HHHHHHHHHHCCCCCCCEECHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEEEECCCCCCC SEAIGRIGDPFELEVHDELVMHALNTLSVAHLKNEDTVVPVSQYLVCAPLVSADGELRAL HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCHHHH LVVKRMPFLSLNFDNLQLLLVLLGYYADGVEHSAFVQRILDSVPNCPYEFALDLSRLARL HHHHHCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QQKAGVASSLVALAFPRDEEGDSLFEHVMRRRRSLDVMWPVQTAKQSVLVNLMPATDTTG HHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHEEEEEECCCCCCC IDGYLARIEASLTAQFNTDLERARVGVHTLHLEGDEPGAALMRLLKRSGLDV CCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA