| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782837
Identifier: 91782837
GI number: 91782837
Start: 1616522
End: 1617883
Strand: Direct
Name: 91782837
Synonym: Bxe_A2988
Alternate gene names: NA
Gene position: 1616522-1617883 (Clockwise)
Preceding gene: 91782836
Following gene: 91782838
Centisome position: 33.02
GC content: 63.51
Gene sequence:
>1362_bases ATGAGCCAGTTCATCTCTTCGCGCACCGCCACGTCGGTGGATTGGCAGCGGCATTTCACGGCGCTCGCCGACGCAATCGG GCGCCTGCAACAAGGTGGTGAAACCACGCTCAGTTCGTTCGCCGGCGAGCAGTCCGATTTCATTCGTTTCAATTCGGGCA AGGTGCGGCAGACCGGCAGCGTGTCGCAAGGCAAGCTGACCTTGCGTCTGATCGACGGCGCACGCCAGGCGTATTCCACG CTGACCGTGTGCGGCGATCTGCAACAGGATCTCGATGAAGTGAGCGCCGCGCTCGTCACCTTGCGGGAGGGGCTGCGCGA CGCGGCGGACGATCCGCATCTGCTGTTCGACACGTCGAAATGGGAGCGAACCACGCAGCGTTCAGGCAAGCTGCCGGACC CTGACGGCTTGGCGAGTGTCGTCGCGCAATGTGCGCAAGGGCTGGATTTCGTGGGGTTTTACGCGGGCGGCACGATCGTG CGCGGTTTCGCGTCCACGAGCGGCAGCCGTGGCTGGTATGAAGTGGACAACTTCAATTTCAGCTGGTCGCTGTACGACCC GAGCGGCCGCGCGATCAAAACGACCTACGCCGGCGACGACTGGAGCGACGCCGTGTTTGCGCGCAAAGTCGAACAGGCCG CGAACCGGCTTGCCGTGCTCGCGCGCGCGCCGCGCACGTTGGCGCCGGGACGCTACCGTTCCTATCTGGCACCCGCGGCG TTGTCCGAACTGCTCGGCGTCACCGCGTGGAACGGTTTTTCCGCTCGCGCGCAGGCGAGTTCACGCAGCGAGTTGTACAA GCTGCATGTGGGAGAAGTCGTAGTCGACCCGCGCGTGACGATCAGCGAAGATCTGAGTCTCGGCATCACGCCAGGCTTCA ACGACGACGGCTATCTGCGCGACAGCGTCCCGTTGATCCAGGCTGGCCGCAGTGCGGAACGGCTGACCAACGCACGCAGT GCACGCGAATACGGCTTGACGCCCAATGGTGCGCTCACCGGCGAGTCACCGGCCGCGCTTTCCATGCAGGCGGGCGATCT GCCGGAAGAAGACGTGCTGGCGAAACTCGGCACCGGGCTCTACATCGGCAATCTCTGGTACGTGAACTTCTCGGACCGCA TGAATTGCCGCCTCACCGGCATGACGCGCTTCGCGACTTTCTGGGTCGAGAACGGAGAAATCGTCGCCCCGCTCGAGGCC ATGCGTTTCGACGACAGCCTGTACCGTTTGCTCGGCAGTGAACTCGAACAACTCGGCGCACAGGCCGAACTGCTTTTGAG CGACTCGACGTGGGGCGAGCGTGCCACGGGCGGCATGCAATTGCCCGGCATTCTGGTGAGGTCATTCGAATTGACGTTAT GA
Upstream 100 bases:
>100_bases CGTCCATGTGCGGCAAGGGTGAACCGGCGCAGATCATTCGCGTGGGCCATGCGTCGCCGGCCTGCGTATTCAGCAATATC GATGTATTCGGAGGCGCATG
Downstream 100 bases:
>100_bases GTTGCCTATGGATCGACAGGAAAAAACAGAATCAAAACCCGGCGGCTTGCCCGAGGGACTGACGCTGCGCGCATTGCGCG TGGCGGACACGGAACAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Zn-Dependent Protease; TldD/PmbA Family Protein; TldD Protein; Zinc-Dependent Protease; Zinc-Dependent Protease TldD/PmbA Family; TldE-Like Protein; DNA Gyrase Modulator Family Protein; Modulator Of DNA Gyrase; TldD/PmbA Family; Microcin-Processing Peptidase PmbA; Zn-Dependent Protease-Like Protein
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSQFISSRTATSVDWQRHFTALADAIGRLQQGGETTLSSFAGEQSDFIRFNSGKVRQTGSVSQGKLTLRLIDGARQAYST LTVCGDLQQDLDEVSAALVTLREGLRDAADDPHLLFDTSKWERTTQRSGKLPDPDGLASVVAQCAQGLDFVGFYAGGTIV RGFASTSGSRGWYEVDNFNFSWSLYDPSGRAIKTTYAGDDWSDAVFARKVEQAANRLAVLARAPRTLAPGRYRSYLAPAA LSELLGVTAWNGFSARAQASSRSELYKLHVGEVVVDPRVTISEDLSLGITPGFNDDGYLRDSVPLIQAGRSAERLTNARS AREYGLTPNGALTGESPAALSMQAGDLPEEDVLAKLGTGLYIGNLWYVNFSDRMNCRLTGMTRFATFWVENGEIVAPLEA MRFDDSLYRLLGSELEQLGAQAELLLSDSTWGERATGGMQLPGILVRSFELTL
Sequences:
>Translated_453_residues MSQFISSRTATSVDWQRHFTALADAIGRLQQGGETTLSSFAGEQSDFIRFNSGKVRQTGSVSQGKLTLRLIDGARQAYST LTVCGDLQQDLDEVSAALVTLREGLRDAADDPHLLFDTSKWERTTQRSGKLPDPDGLASVVAQCAQGLDFVGFYAGGTIV RGFASTSGSRGWYEVDNFNFSWSLYDPSGRAIKTTYAGDDWSDAVFARKVEQAANRLAVLARAPRTLAPGRYRSYLAPAA LSELLGVTAWNGFSARAQASSRSELYKLHVGEVVVDPRVTISEDLSLGITPGFNDDGYLRDSVPLIQAGRSAERLTNARS AREYGLTPNGALTGESPAALSMQAGDLPEEDVLAKLGTGLYIGNLWYVNFSDRMNCRLTGMTRFATFWVENGEIVAPLEA MRFDDSLYRLLGSELEQLGAQAELLLSDSTWGERATGGMQLPGILVRSFELTL >Mature_452_residues SQFISSRTATSVDWQRHFTALADAIGRLQQGGETTLSSFAGEQSDFIRFNSGKVRQTGSVSQGKLTLRLIDGARQAYSTL TVCGDLQQDLDEVSAALVTLREGLRDAADDPHLLFDTSKWERTTQRSGKLPDPDGLASVVAQCAQGLDFVGFYAGGTIVR GFASTSGSRGWYEVDNFNFSWSLYDPSGRAIKTTYAGDDWSDAVFARKVEQAANRLAVLARAPRTLAPGRYRSYLAPAAL SELLGVTAWNGFSARAQASSRSELYKLHVGEVVVDPRVTISEDLSLGITPGFNDDGYLRDSVPLIQAGRSAERLTNARSA REYGLTPNGALTGESPAALSMQAGDLPEEDVLAKLGTGLYIGNLWYVNFSDRMNCRLTGMTRFATFWVENGEIVAPLEAM RFDDSLYRLLGSELEQLGAQAELLLSDSTWGERATGGMQLPGILVRSFELTL
Specific function: Unknown
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49225; Mature: 49093
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFISSRTATSVDWQRHFTALADAIGRLQQGGETTLSSFAGEQSDFIRFNSGKVRQTGS CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCEEECCC VSQGKLTLRLIDGARQAYSTLTVCGDLQQDLDEVSAALVTLREGLRDAADDPHLLFDTSK CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCH WERTTQRSGKLPDPDGLASVVAQCAQGLDFVGFYAGGTIVRGFASTSGSRGWYEVDNFNF HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEHHCCCCCCCCEEECCCEE SWSLYDPSGRAIKTTYAGDDWSDAVFARKVEQAANRLAVLARAPRTLAPGRYRSYLAPAA EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LSELLGVTAWNGFSARAQASSRSELYKLHVGEVVVDPRVTISEDLSLGITPGFNDDGYLR HHHHHHHCCCCCCCCHHCCCCHHHEEEEEECCEEECCCCEECCCCEECCCCCCCCCCCCC DSVPLIQAGRSAERLTNARSAREYGLTPNGALTGESPAALSMQAGDLPEEDVLAKLGTGL CCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCE YIGNLWYVNFSDRMNCRLTGMTRFATFWVENGEIVAPLEAMRFDDSLYRLLGSELEQLGA EEEEEEEEEECCCCEEEEECCEEEEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHCCC QAELLLSDSTWGERATGGMQLPGILVRSFELTL CEEEEEECCCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure SQFISSRTATSVDWQRHFTALADAIGRLQQGGETTLSSFAGEQSDFIRFNSGKVRQTGS CCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCEEECCC VSQGKLTLRLIDGARQAYSTLTVCGDLQQDLDEVSAALVTLREGLRDAADDPHLLFDTSK CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCH WERTTQRSGKLPDPDGLASVVAQCAQGLDFVGFYAGGTIVRGFASTSGSRGWYEVDNFNF HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEHHCCCCCCCCEEECCCEE SWSLYDPSGRAIKTTYAGDDWSDAVFARKVEQAANRLAVLARAPRTLAPGRYRSYLAPAA EEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LSELLGVTAWNGFSARAQASSRSELYKLHVGEVVVDPRVTISEDLSLGITPGFNDDGYLR HHHHHHHCCCCCCCCHHCCCCHHHEEEEEECCEEECCCCEECCCCEECCCCCCCCCCCCC DSVPLIQAGRSAERLTNARSAREYGLTPNGALTGESPAALSMQAGDLPEEDVLAKLGTGL CCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCE YIGNLWYVNFSDRMNCRLTGMTRFATFWVENGEIVAPLEAMRFDDSLYRLLGSELEQLGA EEEEEEEEEECCCCEEEEECCEEEEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHCCC QAELLLSDSTWGERATGGMQLPGILVRSFELTL CEEEEEECCCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA