| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782801
Identifier: 91782801
GI number: 91782801
Start: 1567349
End: 1569526
Strand: Direct
Name: 91782801
Synonym: Bxe_A3024
Alternate gene names: NA
Gene position: 1567349-1569526 (Clockwise)
Preceding gene: 91782800
Following gene: 91782802
Centisome position: 32.01
GC content: 62.08
Gene sequence:
>2178_bases ATGCTGAACTTCGTAACGCGACGCACCCTGACGGTCAGCGGCGCGACGCTGCCGACCTTGCCCGACGGCGAGCCGGCATT GCAGCTACGCACCATCGCAGGGGAGGAAACCCTGTCGACGATCTACGAATACGAGTTGAGCCTCGTCACACCCGTCGATC CGCTGCTGCCGGACAGCACGGCCGCCAACTTCGACCTGAAGGAGATGATCGGCGGGGAACTGACGGTCACCATCCAGCTC GACGGCATGGGGACGTTCGTGCCGGGTATGGCCGGCGCCAGTGGCGCGGCGAATTTCGGCGCCGGCATGCGTGAGATCAG CGGCATTGTGACCGCGGCGAGTCTGGTGAGCCAGTTGAACCGCCAGTATCTCTACCGGTTGAAGATGCAGCCGTGGATCG TGCTTGCCGAGCGGCGCACCGACTACCGGATCTTCCAGAACAAAACAGTCGTCGAGATCATCGACGAGGTGCTCAAGAGC AATTATCTCTACTCCTACGTCAAGCGTCTGGGCGGCAGGTATTCGAACCTGGTCTATCAGGTTCAGTACGGCGAGTCGGA CTTCGCTTTCATCCAGCGCCTGATGGCCGAACACGGCATCTACTGGTTCTTTGAGCACAGCAGGAGTTTTCACCGCATGG TGCTGGTCGACAATCTCGGTGCGCACAAACCCGTGGAGAGTCTCGCGTACCAGACGCTGTGGTACTACCCGCCGGGACAC AAGATCGACCGCGAGTACATCGAGGAATTCCAGACGACCGATTGCATCCAGTCGGGCGTCTGGACGACCGACGACTTCGA CTTCACGCAACCGGGCGCGGATCTGGCGGTAAAGAACGCGCTGCCGCAGAAGACAGCGCATAACCGGCTGAGCGTCTACG AATGGCCGGGCGACTATACGGATGCGAAAGACGGCGCGCAGTTCGCGCGCGTGCGCATGGAGGAAATCCGCGCGCTGGGT GAGCGTGCCACGGGCAGGGGGCATCTGCGCAACGTGGTGTGCGGCACGACCTTTACGCTCGCGGGCTACCCGCAGGAGGC GGCAAACCGGGAGTACCTCGTAATCGGCGCGAAGCTGCTGGCGGAAGAAACCGGCGAGCAAACGGGCGCGGGTCAATACC GCATCGACACGACGTTCGAGGTGCAGCCGGCCACCACGATGTTCCGCGCACCCCGCACGGTGGCGAAGCCGCGCACCACC GGACCGCAAACCGCGATCGTGACGGGGCCGCCCGGCCAGGAAATCTGGACCGACAGATACGGCAGGGTGAAGCTGAAGTT TCACTGGGACCATTCACCCGTGAACGACCAGAACTCATCGTGCTGGGTGCGGGTGTCGTATCCGTGGGCGGGCAGCAACT TCGGCGGCGTGAACATACCGCGCGTGGGTCAGGAGGTGATCGTCGATTTCGAGAATGGCGATCCCGACCGGCCCATCGTG ACGGGGCGCGTGTTCAATGCCGCCTCCATGCCGCCGTGGGAGTTGCCGGGCAACGCGACGCAAAGCGGCATGCTCTCGCG CTCGATGAAAGGCCACTATGGCACAGCCAACGCGATCCGCTTTGAAGATAAGGAAGGCGCGGAGGAACTATGGCTGCAGG CCGAGCGCGACATGCGTACCGAGGTCGAGCACGATGAGTCGCATACCGTACGACACGACCGCACGAGAACGGTCGGACAT GACGAATCCACCACGATTGACCACGACCGCACTGAAAAGGTGGGGCGCGGTGAGCAGGTTGATATCGGTGAGGACCGCCG CCACAGCATAGGCAACGATGCGCATCTCTCTGTCGGGCGCGATCACAAACTGCGCATAGGCAAGGATCGTATTGAGGATA TCGGCAACAACCGCAAGGACACAATCGGGGCCGACTTCCGGATCAACACGGGTGGTCACGTCGCGCATACGGTGAAGGGA CATCACCAGATCGAGGCGGGACAGGCCATTAAACGCCACACCCCCATCTATCAGCTACAGGCCGGCGAAGCTGCTGAAAT CATCGGCCCGGCCGGAAAGATCACGCTCGACAGTCATGGCATCACGCTGGAAGCGGTCAGGATTCTGCTGAAGGGACCGG TTCACGCCAGCACGGGCTGGGTCGAGAACTCGCTGGACATGCGCTCAGAGGTCCGGCAATGCACGTTCACACCCGACTTT TTCCCGTTTTCCGGCTAG
Upstream 100 bases:
>100_bases GAATGAGAGGGTTGAAGATAATGCATTTGGTGATACGCGGTAAGCGCGACGCGTCCAGCGACACCTGCGGAGAGCCGGTT GCACGGCATGGGTACGGCAT
Downstream 100 bases:
>100_bases CCGGTGCCCGCGTAGCACGGCCTGACTATCTTCCTCAAGGAATTCCGCTTCATGATTGTGACTTTCCCGCTCGAAGACGA TCCGTATTACAGCGCTCCCC
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Rhs Element Vgr Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MLNFVTRRTLTVSGATLPTLPDGEPALQLRTIAGEETLSTIYEYELSLVTPVDPLLPDSTAANFDLKEMIGGELTVTIQL DGMGTFVPGMAGASGAANFGAGMREISGIVTAASLVSQLNRQYLYRLKMQPWIVLAERRTDYRIFQNKTVVEIIDEVLKS NYLYSYVKRLGGRYSNLVYQVQYGESDFAFIQRLMAEHGIYWFFEHSRSFHRMVLVDNLGAHKPVESLAYQTLWYYPPGH KIDREYIEEFQTTDCIQSGVWTTDDFDFTQPGADLAVKNALPQKTAHNRLSVYEWPGDYTDAKDGAQFARVRMEEIRALG ERATGRGHLRNVVCGTTFTLAGYPQEAANREYLVIGAKLLAEETGEQTGAGQYRIDTTFEVQPATTMFRAPRTVAKPRTT GPQTAIVTGPPGQEIWTDRYGRVKLKFHWDHSPVNDQNSSCWVRVSYPWAGSNFGGVNIPRVGQEVIVDFENGDPDRPIV TGRVFNAASMPPWELPGNATQSGMLSRSMKGHYGTANAIRFEDKEGAEELWLQAERDMRTEVEHDESHTVRHDRTRTVGH DESTTIDHDRTEKVGRGEQVDIGEDRRHSIGNDAHLSVGRDHKLRIGKDRIEDIGNNRKDTIGADFRINTGGHVAHTVKG HHQIEAGQAIKRHTPIYQLQAGEAAEIIGPAGKITLDSHGITLEAVRILLKGPVHASTGWVENSLDMRSEVRQCTFTPDF FPFSG
Sequences:
>Translated_725_residues MLNFVTRRTLTVSGATLPTLPDGEPALQLRTIAGEETLSTIYEYELSLVTPVDPLLPDSTAANFDLKEMIGGELTVTIQL DGMGTFVPGMAGASGAANFGAGMREISGIVTAASLVSQLNRQYLYRLKMQPWIVLAERRTDYRIFQNKTVVEIIDEVLKS NYLYSYVKRLGGRYSNLVYQVQYGESDFAFIQRLMAEHGIYWFFEHSRSFHRMVLVDNLGAHKPVESLAYQTLWYYPPGH KIDREYIEEFQTTDCIQSGVWTTDDFDFTQPGADLAVKNALPQKTAHNRLSVYEWPGDYTDAKDGAQFARVRMEEIRALG ERATGRGHLRNVVCGTTFTLAGYPQEAANREYLVIGAKLLAEETGEQTGAGQYRIDTTFEVQPATTMFRAPRTVAKPRTT GPQTAIVTGPPGQEIWTDRYGRVKLKFHWDHSPVNDQNSSCWVRVSYPWAGSNFGGVNIPRVGQEVIVDFENGDPDRPIV TGRVFNAASMPPWELPGNATQSGMLSRSMKGHYGTANAIRFEDKEGAEELWLQAERDMRTEVEHDESHTVRHDRTRTVGH DESTTIDHDRTEKVGRGEQVDIGEDRRHSIGNDAHLSVGRDHKLRIGKDRIEDIGNNRKDTIGADFRINTGGHVAHTVKG HHQIEAGQAIKRHTPIYQLQAGEAAEIIGPAGKITLDSHGITLEAVRILLKGPVHASTGWVENSLDMRSEVRQCTFTPDF FPFSG >Mature_725_residues MLNFVTRRTLTVSGATLPTLPDGEPALQLRTIAGEETLSTIYEYELSLVTPVDPLLPDSTAANFDLKEMIGGELTVTIQL DGMGTFVPGMAGASGAANFGAGMREISGIVTAASLVSQLNRQYLYRLKMQPWIVLAERRTDYRIFQNKTVVEIIDEVLKS NYLYSYVKRLGGRYSNLVYQVQYGESDFAFIQRLMAEHGIYWFFEHSRSFHRMVLVDNLGAHKPVESLAYQTLWYYPPGH KIDREYIEEFQTTDCIQSGVWTTDDFDFTQPGADLAVKNALPQKTAHNRLSVYEWPGDYTDAKDGAQFARVRMEEIRALG ERATGRGHLRNVVCGTTFTLAGYPQEAANREYLVIGAKLLAEETGEQTGAGQYRIDTTFEVQPATTMFRAPRTVAKPRTT GPQTAIVTGPPGQEIWTDRYGRVKLKFHWDHSPVNDQNSSCWVRVSYPWAGSNFGGVNIPRVGQEVIVDFENGDPDRPIV TGRVFNAASMPPWELPGNATQSGMLSRSMKGHYGTANAIRFEDKEGAEELWLQAERDMRTEVEHDESHTVRHDRTRTVGH DESTTIDHDRTEKVGRGEQVDIGEDRRHSIGNDAHLSVGRDHKLRIGKDRIEDIGNNRKDTIGADFRINTGGHVAHTVKG HHQIEAGQAIKRHTPIYQLQAGEAAEIIGPAGKITLDSHGITLEAVRILLKGPVHASTGWVENSLDMRSEVRQCTFTPDF FPFSG
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81016; Mature: 81016
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFVTRRTLTVSGATLPTLPDGEPALQLRTIAGEETLSTIYEYELSLVTPVDPLLPDST CCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHEEEEECCCCCCCCCCC AANFDLKEMIGGELTVTIQLDGMGTFVPGMAGASGAANFGAGMREISGIVTAASLVSQLN CCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHH RQYLYRLKMQPWIVLAERRTDYRIFQNKTVVEIIDEVLKSNYLYSYVKRLGGRYSNLVYQ HHHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEE VQYGESDFAFIQRLMAEHGIYWFFEHSRSFHRMVLVDNLGAHKPVESLAYQTLWYYPPGH EEECCCHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHEEEEECCCCC KIDREYIEEFQTTDCIQSGVWTTDDFDFTQPGADLAVKNALPQKTAHNRLSVYEWPGDYT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCC DAKDGAQFARVRMEEIRALGERATGRGHLRNVVCGTTFTLAGYPQEAANREYLVIGAKLL CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCEEEECCCCHHHCCCCEEEEEHHHH AEETGEQTGAGQYRIDTTFEVQPATTMFRAPRTVAKPRTTGPQTAIVTGPPGQEIWTDRY HHHCCCCCCCCCEEECEEEEECCCHHHHHCCCHHCCCCCCCCCEEEEECCCCCHHHCCCC GRVKLKFHWDHSPVNDQNSSCWVRVSYPWAGSNFGGVNIPRVGQEVIVDFENGDPDRPIV CEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEE TGRVFNAASMPPWELPGNATQSGMLSRSMKGHYGTANAIRFEDKEGAEELWLQAERDMRT EEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH EVEHDESHTVRHDRTRTVGHDESTTIDHDRTEKVGRGEQVDIGEDRRHSIGNDAHLSVGR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCHHHCCCCCCEEECCC DHKLRIGKDRIEDIGNNRKDTIGADFRINTGGHVAHTVKGHHQIEAGQAIKRHTPIYQLQ CCCEEECHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCEECCCCHHHHCCCEEEEC AGEAAEIIGPAGKITLDSHGITLEAVRILLKGPVHASTGWVENSLDMRSEVRQCTFTPDF CCCCHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEECCCCC FPFSG CCCCC >Mature Secondary Structure MLNFVTRRTLTVSGATLPTLPDGEPALQLRTIAGEETLSTIYEYELSLVTPVDPLLPDST CCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHEEEEECCCCCCCCCCC AANFDLKEMIGGELTVTIQLDGMGTFVPGMAGASGAANFGAGMREISGIVTAASLVSQLN CCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHH RQYLYRLKMQPWIVLAERRTDYRIFQNKTVVEIIDEVLKSNYLYSYVKRLGGRYSNLVYQ HHHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEE VQYGESDFAFIQRLMAEHGIYWFFEHSRSFHRMVLVDNLGAHKPVESLAYQTLWYYPPGH EEECCCHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHEEEEECCCCC KIDREYIEEFQTTDCIQSGVWTTDDFDFTQPGADLAVKNALPQKTAHNRLSVYEWPGDYT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCC DAKDGAQFARVRMEEIRALGERATGRGHLRNVVCGTTFTLAGYPQEAANREYLVIGAKLL CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCEEEECCCCHHHCCCCEEEEEHHHH AEETGEQTGAGQYRIDTTFEVQPATTMFRAPRTVAKPRTTGPQTAIVTGPPGQEIWTDRY HHHCCCCCCCCCEEECEEEEECCCHHHHHCCCHHCCCCCCCCCEEEEECCCCCHHHCCCC GRVKLKFHWDHSPVNDQNSSCWVRVSYPWAGSNFGGVNIPRVGQEVIVDFENGDPDRPIV CEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEE TGRVFNAASMPPWELPGNATQSGMLSRSMKGHYGTANAIRFEDKEGAEELWLQAERDMRT EEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH EVEHDESHTVRHDRTRTVGHDESTTIDHDRTEKVGRGEQVDIGEDRRHSIGNDAHLSVGR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCHHHCCCCCCEEECCC DHKLRIGKDRIEDIGNNRKDTIGADFRINTGGHVAHTVKGHHQIEAGQAIKRHTPIYQLQ CCCEEECHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCEECCCCHHHHCCCEEEEC AGEAAEIIGPAGKITLDSHGITLEAVRILLKGPVHASTGWVENSLDMRSEVRQCTFTPDF CCCCHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEECCCCC FPFSG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA