| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782785
Identifier: 91782785
GI number: 91782785
Start: 1548988
End: 1549551
Strand: Direct
Name: 91782785
Synonym: Bxe_A3040
Alternate gene names: NA
Gene position: 1548988-1549551 (Clockwise)
Preceding gene: 91782784
Following gene: 91782786
Centisome position: 31.64
GC content: 62.41
Gene sequence:
>564_bases ATGTCACCCGAAACGCTCGCCCAAGCGCTGCAGATTCCGCTCGCCCGTGCTTCCCTGTGGGCCGATCCACTATCGGCCGC GATGGCGCTGTATGAGATCGACACGCCGGCTCGCGAGGCGGCCTTTCTCGCGCAGTGCGGCCATGAATGTGGCCGCTTTC AGTGGCTCCGCGAGCTGTGGGGCCCGACACCGGAACAGAAGCTTTATGAGCCGTTCACGCCGAAGTCTCGCGCATTGGGA AATACGACCGCCGGCGACGGTTTTCGCTATCGCGGTGGCGGCCTGCTCGGCATCACCGGTCGTTACAACTTCCGGGTGAT GGGCCAGAAGATCGGCTTCGATCTCGAGGCCAACCCCGATCTCATTGTGCGTCCTGACGTCGCGTCGCTCGCATCAGCGC AATTCTGGGCCGATAGAAACTTCAACGCATATGCCGATGCAGGCGAGTTTCTGACGCTGAGCCGGGCTATCAATCTCGGC AATCCGAACAGCACGGCGACACCGAATGGCATCGACGATCGCGAGCAGCTCTGGACGAGCTGCAAGGCTGCGCTCGGTGC GTGA
Upstream 100 bases:
>100_bases GGGCGAGCGCGATCTTCAAGCTGATGGGCTAGCGACGCACGCCGTCCGTGCAATTTCCTTTCTTTTAATCCGCGCACAGA CCGTCGCGCTGGAGATCCCC
Downstream 100 bases:
>100_bases CATAAACAGCGAGTTTGCGATTTTTCGCAATTTCGCAATCTGCCGCCTCGAGCGGCGTTTTTTCATTCTGGAGCTTTCGA TGAACTCTGCAACCTGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Pyocin R2_PP Lytic; Chitinase; Lysozyme; Prophage; Chitinase-Like Protein; Endolysin; Family; Phage Lysozyme; Chitinase Class I Family Protein; Glycoside Hydrolase Phage Related Protein; Phage Lytic; Chitinase Domain-Containing Protein; Lysozyme Phage-Related; Glycohydrolase; Peptidase; Phage-Related Lytic; Class I Chitinase; Glycoside Hydrolase; Phage Encoded Lysozyme
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSPETLAQALQIPLARASLWADPLSAAMALYEIDTPAREAAFLAQCGHECGRFQWLRELWGPTPEQKLYEPFTPKSRALG NTTAGDGFRYRGGGLLGITGRYNFRVMGQKIGFDLEANPDLIVRPDVASLASAQFWADRNFNAYADAGEFLTLSRAINLG NPNSTATPNGIDDREQLWTSCKAALGA
Sequences:
>Translated_187_residues MSPETLAQALQIPLARASLWADPLSAAMALYEIDTPAREAAFLAQCGHECGRFQWLRELWGPTPEQKLYEPFTPKSRALG NTTAGDGFRYRGGGLLGITGRYNFRVMGQKIGFDLEANPDLIVRPDVASLASAQFWADRNFNAYADAGEFLTLSRAINLG NPNSTATPNGIDDREQLWTSCKAALGA >Mature_186_residues SPETLAQALQIPLARASLWADPLSAAMALYEIDTPAREAAFLAQCGHECGRFQWLRELWGPTPEQKLYEPFTPKSRALGN TTAGDGFRYRGGGLLGITGRYNFRVMGQKIGFDLEANPDLIVRPDVASLASAQFWADRNFNAYADAGEFLTLSRAINLGN PNSTATPNGIDDREQLWTSCKAALGA
Specific function: Unknown
COG id: COG3179
COG function: function code R; Predicted chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20383; Mature: 20252
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPETLAQALQIPLARASLWADPLSAAMALYEIDTPAREAAFLAQCGHECGRFQWLRELW CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GPTPEQKLYEPFTPKSRALGNTTAGDGFRYRGGGLLGITGRYNFRVMGQKIGFDLEANPD CCCCHHHHCCCCCCCHHCCCCCCCCCCEEECCCCEEEECCCCEEEEECHHHCCCCCCCCC LIVRPDVASLASAQFWADRNFNAYADAGEFLTLSRAINLGNPNSTATPNGIDDREQLWTS EEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHEEECCCCCCCCCCCCCCHHHHHHHH CKAALGA HHHHHCC >Mature Secondary Structure SPETLAQALQIPLARASLWADPLSAAMALYEIDTPAREAAFLAQCGHECGRFQWLRELW CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GPTPEQKLYEPFTPKSRALGNTTAGDGFRYRGGGLLGITGRYNFRVMGQKIGFDLEANPD CCCCHHHHCCCCCCCHHCCCCCCCCCCEEECCCCEEEECCCCEEEEECHHHCCCCCCCCC LIVRPDVASLASAQFWADRNFNAYADAGEFLTLSRAINLGNPNSTATPNGIDDREQLWTS EEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHEEECCCCCCCCCCCCCCHHHHHHHH CKAALGA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA