| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ycfK [C]
Identifier: 91782781
GI number: 91782781
Start: 1545240
End: 1546202
Strand: Direct
Name: ycfK [C]
Synonym: Bxe_A3044
Alternate gene names: 91782781
Gene position: 1545240-1546202 (Clockwise)
Preceding gene: 91782780
Following gene: 91782784
Centisome position: 31.56
GC content: 58.36
Gene sequence:
>963_bases ATGTTTCGAATCGACGATGCAACCGCCGCCAGTTCACTACCCGTACCGGAAGCTCCTGGCCCCGAAGGCTACTTCACCGA AGGCAATCCAGCTGGCGGGACACCTGCGACGAACGTGCGCGGGTCATGGCTAAACATGATTCAGGAAGAGCTATGCGCGA TCCTTGCAGCGGCCGGCATTGCTCGCTCAAAGACGAGCTACAACCAGGTCAATACCGCTCTGCAGAAAATGTATAGTCCC GTTGTAGGTAGCTCGCGCAATCTGGCAATGAGCGTGGCAGCCGCATCGGCTACGGCTACTCTCACTGCAGATGAGATTGT TGTGGGCACCGAGCTGGGTGGCCAGAAGTACGTCCTGCCGAGCTTCAACAAGACCATCAACCTCGCGACGACCGGCGCGG GCGGCATGGACACAGGCACGGCACCCATCTCGGGCTTCGTTGCGCTATACGCGATCTACAACCCGACGACTCAGACGTCC GCACTACTGGCGACGAATGCGACAAGCGCAGTCCAGCCTAACGTGTATGGCGGTGGGAATATGCCGAGCGGCTACACGGC GAGCGCGCTTCTTTCGGTTTGGGCGACAAACGCCAGTTCGCAGTTTATTGTTGGTGGCTTGCACGACCGCTATCATTTTT TTGCGCCGCGCCAGTTCCTCAATACCAGCACGGTCAATGGCTCGTTGACATCCACGCCATGCACGGTCATCCCAAAGAAC GCGGTTCGGACGACCATCGCCGCGCAGACTGCGTCGAGCGTTACGACGGGCATGAACCTGATCATTGCAGCTGATGCAAG CGGAACTGGTCAGAAAGTGACCGGCGGATATTCACAGCCCGGTACTGGCATCCCCGGCAACTTTGATCTAGACGTGCTTA CGCCCCAGACTGTGTTCACGCAGATGGCCATCGCATCTGGCACTCTCACTTCGACGGCCAGCGCGGTCGGATACTGGATT TAA
Upstream 100 bases:
>100_bases CTGTCGGAGACCACGGTAATTCCTTCCTTATATTTTAGAGGCCCGCTTGATGCGGGCTCATTGCATTTGACAGCGTCGTT GTCGACGCATAAGAGGCCAC
Downstream 100 bases:
>100_bases ATCATGACGACTATCAACGTTCAATTCGCAGACAGCACACAAACGGCGATCGTGTCATTTTTTTCGGGGGCGCCCGATCC AGAATTCTGGTCTAACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MFRIDDATAASSLPVPEAPGPEGYFTEGNPAGGTPATNVRGSWLNMIQEELCAILAAAGIARSKTSYNQVNTALQKMYSP VVGSSRNLAMSVAAASATATLTADEIVVGTELGGQKYVLPSFNKTINLATTGAGGMDTGTAPISGFVALYAIYNPTTQTS ALLATNATSAVQPNVYGGGNMPSGYTASALLSVWATNASSQFIVGGLHDRYHFFAPRQFLNTSTVNGSLTSTPCTVIPKN AVRTTIAAQTASSVTTGMNLIIAADASGTGQKVTGGYSQPGTGIPGNFDLDVLTPQTVFTQMAIASGTLTSTASAVGYWI
Sequences:
>Translated_320_residues MFRIDDATAASSLPVPEAPGPEGYFTEGNPAGGTPATNVRGSWLNMIQEELCAILAAAGIARSKTSYNQVNTALQKMYSP VVGSSRNLAMSVAAASATATLTADEIVVGTELGGQKYVLPSFNKTINLATTGAGGMDTGTAPISGFVALYAIYNPTTQTS ALLATNATSAVQPNVYGGGNMPSGYTASALLSVWATNASSQFIVGGLHDRYHFFAPRQFLNTSTVNGSLTSTPCTVIPKN AVRTTIAAQTASSVTTGMNLIIAADASGTGQKVTGGYSQPGTGIPGNFDLDVLTPQTVFTQMAIASGTLTSTASAVGYWI >Mature_320_residues MFRIDDATAASSLPVPEAPGPEGYFTEGNPAGGTPATNVRGSWLNMIQEELCAILAAAGIARSKTSYNQVNTALQKMYSP VVGSSRNLAMSVAAASATATLTADEIVVGTELGGQKYVLPSFNKTINLATTGAGGMDTGTAPISGFVALYAIYNPTTQTS ALLATNATSAVQPNVYGGGNMPSGYTASALLSVWATNASSQFIVGGLHDRYHFFAPRQFLNTSTVNGSLTSTPCTVIPKN AVRTTIAAQTASSVTTGMNLIIAADASGTGQKVTGGYSQPGTGIPGNFDLDVLTPQTVFTQMAIASGTLTSTASAVGYWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32690; Mature: 32690
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRIDDATAASSLPVPEAPGPEGYFTEGNPAGGTPATNVRGSWLNMIQEELCAILAAAGI CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ARSKTSYNQVNTALQKMYSPVVGSSRNLAMSVAAASATATLTADEIVVGTELGGQKYVLP HHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECEEEEEECCCCCEEECC SFNKTINLATTGAGGMDTGTAPISGFVALYAIYNPTTQTSALLATNATSAVQPNVYGGGN CCCCEEEEEECCCCCCCCCCCHHHHEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC MPSGYTASALLSVWATNASSQFIVGGLHDRYHFFAPRQFLNTSTVNGSLTSTPCTVIPKN CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCHHHHCCCCCCCCCCCCCCEEECCH AVRTTIAAQTASSVTTGMNLIIAADASGTGQKVTGGYSQPGTGIPGNFDLDVLTPQTVFT HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCEEEECHHHHHH QMAIASGTLTSTASAVGYWI HHHHHCCCHHHHHHHHEECC >Mature Secondary Structure MFRIDDATAASSLPVPEAPGPEGYFTEGNPAGGTPATNVRGSWLNMIQEELCAILAAAGI CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ARSKTSYNQVNTALQKMYSPVVGSSRNLAMSVAAASATATLTADEIVVGTELGGQKYVLP HHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECEEEEEECCCCCEEECC SFNKTINLATTGAGGMDTGTAPISGFVALYAIYNPTTQTSALLATNATSAVQPNVYGGGN CCCCEEEEEECCCCCCCCCCCHHHHEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC MPSGYTASALLSVWATNASSQFIVGGLHDRYHFFAPRQFLNTSTVNGSLTSTPCTVIPKN CCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCHHHHCCCCCCCCCCCCCCEEECCH AVRTTIAAQTASSVTTGMNLIIAADASGTGQKVTGGYSQPGTGIPGNFDLDVLTPQTVFT HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCEEEECHHHHHH QMAIASGTLTSTASAVGYWI HHHHHCCCHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA