| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782710
Identifier: 91782710
GI number: 91782710
Start: 1487807
End: 1490689
Strand: Direct
Name: 91782710
Synonym: Bxe_A3115
Alternate gene names: NA
Gene position: 1487807-1490689 (Clockwise)
Preceding gene: 91782708
Following gene: 91782711
Centisome position: 30.39
GC content: 65.0
Gene sequence:
>2883_bases ATGTCGACCAGCCCGATCGGTAATTCCAGTGCGTTTTCATCACCCTATTCATCCGGCGCGGATGGATCTCCCGTACCATC TGTGCCCGATTCACGCGACGCGCCGGCGGCAGCCCGTGGCGGCGGCTCAGCCCGGCGCGACTCCGTCGGCCAGAGCATTC CCCCCGGCGTCGCCGCAGCCCACCCGTTGCTGCGTCGGTACTCCGCCGCGAAGCAACCGTCGGCATCGCGGCAGTCTTAC CCGGCGTCAGCGACGCAATTTGCCGCCGCCATGATCGCCCGTTACGATGGCGGGACCCAGTCGCGCAACGAGGCCGCCGA CCGCAACAACACCCTGCTCATGCTGCAGACAGCGAAGCTGTCGATGACCGGCCTGCCACCCGACCAGGTGGAAATGAACC TGAACGAACTGCAGTTTGCCGGCGCACTGGCCCAGATGAGCGAGGCGAAGCGGAGCCTGTTCGCGCAACGCGCGAACGCA CTGCGCACTGCGCCGGACCACCGCTATGAGGCAATGCTGTCCGCCTTGCAGCAGGACGTCCAGAGCGAGCTGCGCGGCAT CCAGGCCGATCCGGTGCGGCGCATGAACGCGGTGTTCAATCCGCCAGCCGGCCTGGCCCTGCTGGGCGGGAACGGCCAGC AGCAGATGGCCGCGTTGCGCAGCGAGGCGATGAAGATGAATGCAGCTGGCGCCAGCCCGGCGCAGCGCGAGCAGGCTTTC GCGAGAGCCAGCGAAATCAGGTCGCGGATGCAGACGCAGATCCTGCAGCAATCACAGGACATCCACGCGGCCCAGCAGAA GAGCTGGGCCGACTCCGCGGCGCGTGTGAACCGGATCCTCGACGACGCGCCGAAATACGCGGCGGACACGATCCAGCTGC CCCATAACTCGGACGATCCGGACTGGGACACGAATACACGCAAGCCCGCCTACGCGAAGACGTTTCCGTACCAGTCGGTG ATGGAAAAGCTGCTCTCGCCCGACGGCTACTCACAACAGGAGCGCGGCCGTTCGACTCCACGCACGCTGCCAGCCGGAGA TCGCGCGCGCGACCTGCTGACCTTCCAGGAGGGCATGTCGGATCCGGGCTCGGACATTTACCGGCGTGTCACGAAGCTGG AACAGCAGGCACTCACGACGATGGCCGCTCCCGGGCCAGAACTGGACGCGGGCCGGCCCGCCTCGACCCTCAGCGGCGTG GCGGCCCATGCGCCGGCATACGATCAGAACTACGTATCAAACCTCGCGGCCGGCTATCAAGGCGTGCTGAAGGACACCGA CCAGCAGAACCGCGCGATGCTGAGGGAGCATACCCCCGGTCTGGCGGACAAGGTGCTGTACGGCATCGGCCGGTTCGCCG CGGACCTCTCGCCGATTCCCGGCATGGACTGGCTCGCCACCCAGCTACTCGACGCCGGGTTTCCGGATCACGGCGGCCTG AGCGGTGATGAGGTGAAAAACATCGACCTGGGGGCGATGATCTTCGGGTTGTTGCTCGGTGGGCGCGAGCCGGAGGGCGA GGGGGCGCTGAAGGCGCCGGTCGCCGGGCCGGGCGAGGGGCCGGGACGCGGAATGGGAAACACGCCGCAAGGCCAACCGA CGCAGACCGGTGTTGCCGCAAGCCGCGCATTCACGCCCGCCGGCCTGCCTGAAGGCTATGCGCTCCAGGGCATTCCGTCC TCGTACGGTCCATCGGCCACGCCGGGCGTGCATGTCGATGCGGCCAGCGGCCAGAAATTCATCATCGCCGACAGGCAGGC GTTCGCGGTGCGCTACGACAGGGATAACGCCACCTACCGGATCTACGATCCCGCCAACCCCACACGCCCCGCCTATCCGG TCCGCTTCGACACGCAGACCGCGAAGTGGGCAATCCATCAGGATGTCGGTTTGCAGGGCGGCATGGATAACGGCAACACC TCGTCTTCCGGAAGCGGGCCATCGGCCGCATCTTCGGAATTGCCGCCATTCGCCGATGCGTTTCACGTCACAACATCGAC GGGTTCAGAACCATCGGCCGCAATGATGGAAACGCTGAACCCGGACGAATGGCATTCGGCCGCCAGCGGCGAACTCGACA ACCCCGCCTACGTCAACCAATACAAAAGCGCATTCGACGCATTGCCCGCAGCGCAACGGCGCGCTATCCGGGAATGGACC CATCTGGATATCGGCGGCGACAGCGACCGCTATTCCAGCGACAGCAGCTATGAAGGTAATAACTTCGAGCTGAATCAGCA ACTATACCGGCGTGTCCATGATGCTGACACGGCGGTCAATGCCCGCAGGTTGCAGGAGGGTATCGACCATCTGCCGAAAC CGCAGGAGCCGAACCGCCTGCTGCGTATTGCCGAGGTTCCCGCCGATTATGCAAGCCGGTTTGCACCGGGCGAGTACGTG ACCAATTCCCCTGCTTTCATGTCTGCGTCGAGCGAAAACGAGTATGCGAATGCCACGTTGAGAGATGGGCCGGGGGGAAG TGGACCTGATCATCCCTTTGCGCTCTACGACATCGCGGCGCAATCGGCGACCCCATTCATCAAATCCATCACGACGCTGG CCAGTGAAGAAAGCGAATGGCTTTTCAGGCCAAACTCGCTGTTCAGGATCGAAGAAATCGCCAGAGCCACCCCAACCGAC GCGGAGGACGCGGCTCGCATCGGCATGCGTCTGGTCGAAGTCCCGATCACCGCGCCCGTCTATGCGAAGAACATCCACTC GGGCGAATGGGAACTTGTCTATCCGCCGGGAATGCGGCCGGTCTACACGGAACTGCGGTCAACCAGGCATCCGCCGCTGC AGCCGCCGGCTCCCCGGCATCCGGACTCACCCCCGGCGCCCACGGCCGGCAATCCGAACGCGACCGGCCCATCACGCGTC TGA
Upstream 100 bases:
>100_bases CCTGTATGACACGGGAGAGGCTCACCGATGATTTGATTGCCATGACGGTGGGCGGATCTTCGTTGCGCACCGTTCGTCCA CAACTCGTCGAGGTGCGACC
Downstream 100 bases:
>100_bases TCTGTTCGACGCGGCGGCCCGTCGCGATTCCGATCGTGCGCAACGCACGCATACCCTGCCGGGTGCCGGTGGCACTGGCA GGGAGATGACGTTTGGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 960; Mature: 959
Protein sequence:
>960_residues MSTSPIGNSSAFSSPYSSGADGSPVPSVPDSRDAPAAARGGGSARRDSVGQSIPPGVAAAHPLLRRYSAAKQPSASRQSY PASATQFAAAMIARYDGGTQSRNEAADRNNTLLMLQTAKLSMTGLPPDQVEMNLNELQFAGALAQMSEAKRSLFAQRANA LRTAPDHRYEAMLSALQQDVQSELRGIQADPVRRMNAVFNPPAGLALLGGNGQQQMAALRSEAMKMNAAGASPAQREQAF ARASEIRSRMQTQILQQSQDIHAAQQKSWADSAARVNRILDDAPKYAADTIQLPHNSDDPDWDTNTRKPAYAKTFPYQSV MEKLLSPDGYSQQERGRSTPRTLPAGDRARDLLTFQEGMSDPGSDIYRRVTKLEQQALTTMAAPGPELDAGRPASTLSGV AAHAPAYDQNYVSNLAAGYQGVLKDTDQQNRAMLREHTPGLADKVLYGIGRFAADLSPIPGMDWLATQLLDAGFPDHGGL SGDEVKNIDLGAMIFGLLLGGREPEGEGALKAPVAGPGEGPGRGMGNTPQGQPTQTGVAASRAFTPAGLPEGYALQGIPS SYGPSATPGVHVDAASGQKFIIADRQAFAVRYDRDNATYRIYDPANPTRPAYPVRFDTQTAKWAIHQDVGLQGGMDNGNT SSSGSGPSAASSELPPFADAFHVTTSTGSEPSAAMMETLNPDEWHSAASGELDNPAYVNQYKSAFDALPAAQRRAIREWT HLDIGGDSDRYSSDSSYEGNNFELNQQLYRRVHDADTAVNARRLQEGIDHLPKPQEPNRLLRIAEVPADYASRFAPGEYV TNSPAFMSASSENEYANATLRDGPGGSGPDHPFALYDIAAQSATPFIKSITTLASEESEWLFRPNSLFRIEEIARATPTD AEDAARIGMRLVEVPITAPVYAKNIHSGEWELVYPPGMRPVYTELRSTRHPPLQPPAPRHPDSPPAPTAGNPNATGPSRV
Sequences:
>Translated_960_residues MSTSPIGNSSAFSSPYSSGADGSPVPSVPDSRDAPAAARGGGSARRDSVGQSIPPGVAAAHPLLRRYSAAKQPSASRQSY PASATQFAAAMIARYDGGTQSRNEAADRNNTLLMLQTAKLSMTGLPPDQVEMNLNELQFAGALAQMSEAKRSLFAQRANA LRTAPDHRYEAMLSALQQDVQSELRGIQADPVRRMNAVFNPPAGLALLGGNGQQQMAALRSEAMKMNAAGASPAQREQAF ARASEIRSRMQTQILQQSQDIHAAQQKSWADSAARVNRILDDAPKYAADTIQLPHNSDDPDWDTNTRKPAYAKTFPYQSV MEKLLSPDGYSQQERGRSTPRTLPAGDRARDLLTFQEGMSDPGSDIYRRVTKLEQQALTTMAAPGPELDAGRPASTLSGV AAHAPAYDQNYVSNLAAGYQGVLKDTDQQNRAMLREHTPGLADKVLYGIGRFAADLSPIPGMDWLATQLLDAGFPDHGGL SGDEVKNIDLGAMIFGLLLGGREPEGEGALKAPVAGPGEGPGRGMGNTPQGQPTQTGVAASRAFTPAGLPEGYALQGIPS SYGPSATPGVHVDAASGQKFIIADRQAFAVRYDRDNATYRIYDPANPTRPAYPVRFDTQTAKWAIHQDVGLQGGMDNGNT SSSGSGPSAASSELPPFADAFHVTTSTGSEPSAAMMETLNPDEWHSAASGELDNPAYVNQYKSAFDALPAAQRRAIREWT HLDIGGDSDRYSSDSSYEGNNFELNQQLYRRVHDADTAVNARRLQEGIDHLPKPQEPNRLLRIAEVPADYASRFAPGEYV TNSPAFMSASSENEYANATLRDGPGGSGPDHPFALYDIAAQSATPFIKSITTLASEESEWLFRPNSLFRIEEIARATPTD AEDAARIGMRLVEVPITAPVYAKNIHSGEWELVYPPGMRPVYTELRSTRHPPLQPPAPRHPDSPPAPTAGNPNATGPSRV >Mature_959_residues STSPIGNSSAFSSPYSSGADGSPVPSVPDSRDAPAAARGGGSARRDSVGQSIPPGVAAAHPLLRRYSAAKQPSASRQSYP ASATQFAAAMIARYDGGTQSRNEAADRNNTLLMLQTAKLSMTGLPPDQVEMNLNELQFAGALAQMSEAKRSLFAQRANAL RTAPDHRYEAMLSALQQDVQSELRGIQADPVRRMNAVFNPPAGLALLGGNGQQQMAALRSEAMKMNAAGASPAQREQAFA RASEIRSRMQTQILQQSQDIHAAQQKSWADSAARVNRILDDAPKYAADTIQLPHNSDDPDWDTNTRKPAYAKTFPYQSVM EKLLSPDGYSQQERGRSTPRTLPAGDRARDLLTFQEGMSDPGSDIYRRVTKLEQQALTTMAAPGPELDAGRPASTLSGVA AHAPAYDQNYVSNLAAGYQGVLKDTDQQNRAMLREHTPGLADKVLYGIGRFAADLSPIPGMDWLATQLLDAGFPDHGGLS GDEVKNIDLGAMIFGLLLGGREPEGEGALKAPVAGPGEGPGRGMGNTPQGQPTQTGVAASRAFTPAGLPEGYALQGIPSS YGPSATPGVHVDAASGQKFIIADRQAFAVRYDRDNATYRIYDPANPTRPAYPVRFDTQTAKWAIHQDVGLQGGMDNGNTS SSGSGPSAASSELPPFADAFHVTTSTGSEPSAAMMETLNPDEWHSAASGELDNPAYVNQYKSAFDALPAAQRRAIREWTH LDIGGDSDRYSSDSSYEGNNFELNQQLYRRVHDADTAVNARRLQEGIDHLPKPQEPNRLLRIAEVPADYASRFAPGEYVT NSPAFMSASSENEYANATLRDGPGGSGPDHPFALYDIAAQSATPFIKSITTLASEESEWLFRPNSLFRIEEIARATPTDA EDAARIGMRLVEVPITAPVYAKNIHSGEWELVYPPGMRPVYTELRSTRHPPLQPPAPRHPDSPPAPTAGNPNATGPSRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102753; Mature: 102621
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSPIGNSSAFSSPYSSGADGSPVPSVPDSRDAPAAARGGGSARRDSVGQSIPPGVAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCCHHHH HPLLRRYSAAKQPSASRQSYPASATQFAAAMIARYDGGTQSRNEAADRNNTLLMLQTAKL HHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCE SMTGLPPDQVEMNLNELQFAGALAQMSEAKRSLFAQRANALRTAPDHRYEAMLSALQQDV EECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QSELRGIQADPVRRMNAVFNPPAGLALLGGNGQQQMAALRSEAMKMNAAGASPAQREQAF HHHHCCCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH ARASEIRSRMQTQILQQSQDIHAAQQKSWADSAARVNRILDDAPKYAADTIQLPHNSDDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCCC DWDTNTRKPAYAKTFPYQSVMEKLLSPDGYSQQERGRSTPRTLPAGDRARDLLTFQEGMS CCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCC DPGSDIYRRVTKLEQQALTTMAAPGPELDAGRPASTLSGVAAHAPAYDQNYVSNLAAGYQ CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH GVLKDTDQQNRAMLREHTPGLADKVLYGIGRFAADLSPIPGMDWLATQLLDAGFPDHGGL HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC SGDEVKNIDLGAMIFGLLLGGREPEGEGALKAPVAGPGEGPGRGMGNTPQGQPTQTGVAA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH SRAFTPAGLPEGYALQGIPSSYGPSATPGVHVDAASGQKFIIADRQAFAVRYDRDNATYR HHCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEEEEECCCCEEE IYDPANPTRPAYPVRFDTQTAKWAIHQDVGLQGGMDNGNTSSSGSGPSAASSELPPFADA EECCCCCCCCCCCEEECCCCHHEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FHVTTSTGSEPSAAMMETLNPDEWHSAASGELDNPAYVNQYKSAFDALPAAQRRAIREWT EEEEECCCCCCHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH HLDIGGDSDRYSSDSSYEGNNFELNQQLYRRVHDADTAVNARRLQEGIDHLPKPQEPNRL EECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LRIAEVPADYASRFAPGEYVTNSPAFMSASSENEYANATLRDGPGGSGPDHPFALYDIAA EEHHHCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCEEHHHHHH QSATPFIKSITTLASEESEWLFRPNSLFRIEEIARATPTDAEDAARIGMRLVEVPITAPV HHCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCCCH YAKNIHSGEWELVYPPGMRPVYTELRSTRHPPLQPPAPRHPDSPPAPTAGNPNATGPSRV HHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STSPIGNSSAFSSPYSSGADGSPVPSVPDSRDAPAAARGGGSARRDSVGQSIPPGVAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCCHHHH HPLLRRYSAAKQPSASRQSYPASATQFAAAMIARYDGGTQSRNEAADRNNTLLMLQTAKL HHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCE SMTGLPPDQVEMNLNELQFAGALAQMSEAKRSLFAQRANALRTAPDHRYEAMLSALQQDV EECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QSELRGIQADPVRRMNAVFNPPAGLALLGGNGQQQMAALRSEAMKMNAAGASPAQREQAF HHHHCCCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH ARASEIRSRMQTQILQQSQDIHAAQQKSWADSAARVNRILDDAPKYAADTIQLPHNSDDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCCC DWDTNTRKPAYAKTFPYQSVMEKLLSPDGYSQQERGRSTPRTLPAGDRARDLLTFQEGMS CCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCC DPGSDIYRRVTKLEQQALTTMAAPGPELDAGRPASTLSGVAAHAPAYDQNYVSNLAAGYQ CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH GVLKDTDQQNRAMLREHTPGLADKVLYGIGRFAADLSPIPGMDWLATQLLDAGFPDHGGL HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC SGDEVKNIDLGAMIFGLLLGGREPEGEGALKAPVAGPGEGPGRGMGNTPQGQPTQTGVAA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH SRAFTPAGLPEGYALQGIPSSYGPSATPGVHVDAASGQKFIIADRQAFAVRYDRDNATYR HHCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCEEEEECCEEEEEEEECCCCEEE IYDPANPTRPAYPVRFDTQTAKWAIHQDVGLQGGMDNGNTSSSGSGPSAASSELPPFADA EECCCCCCCCCCCEEECCCCHHEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FHVTTSTGSEPSAAMMETLNPDEWHSAASGELDNPAYVNQYKSAFDALPAAQRRAIREWT EEEEECCCCCCHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH HLDIGGDSDRYSSDSSYEGNNFELNQQLYRRVHDADTAVNARRLQEGIDHLPKPQEPNRL EECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LRIAEVPADYASRFAPGEYVTNSPAFMSASSENEYANATLRDGPGGSGPDHPFALYDIAA EEHHHCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCEEHHHHHH QSATPFIKSITTLASEESEWLFRPNSLFRIEEIARATPTDAEDAARIGMRLVEVPITAPV HHCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCCCH YAKNIHSGEWELVYPPGMRPVYTELRSTRHPPLQPPAPRHPDSPPAPTAGNPNATGPSRV HHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA