| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782670
Identifier: 91782670
GI number: 91782670
Start: 1450755
End: 1451993
Strand: Direct
Name: 91782670
Synonym: Bxe_A3155
Alternate gene names: NA
Gene position: 1450755-1451993 (Clockwise)
Preceding gene: 91782669
Following gene: 91782672
Centisome position: 29.63
GC content: 62.79
Gene sequence:
>1239_bases ATGGCGCAACGCAATCTCAAGCGGGCGCGCGTCGGCGCGCCCGGCGACGGGGAAGGCGAGGGCGCCGGTCCGGCGCCCGC CGTGCACCCCGGCCGGCACATCCATTTGCCTGATTACGAAACCGTTGCCCTGATGCTGCAAGGTGGCGGCGCGTTAGGCG CCTATCAGGCCGGCGTTTTTCAGGGCCTTCACGAAGCCGGCATCGCGCCGAACTGGCTGGCCGGCATTTCGATCGGCGCG TTGAATACGGCCATCATTGCCGGCAATCCGCCGGAGAAGCGCGTGGAGCGGCTGCGGCAATTCTGGGAGACGATCTGCCA GCCGGCTTTCGGACCGCCGTTGCCCACGTTTATCGAGCACGCGCTGTTCAACTCCAGCGAAGCCATACGCAAGGTGTTTA CGGCAACCCAGGCAATGGGCGCCATCGTCGAAGGGCAAAAAGGCTTTTTCGTGCCGCGCTTCCCGCCGCCGTTGCCCACG GTGTCCGGACCGCCGCAGCTCGCCAGTTACTACGACACCACGCCGCTGAAGGCCACGCTCGAAGCGCTGTGCGATTTCGA CCGGATCAATTCGCGCGAAACGCGGGTTTCGGTGGGCGCGGTCAATTGCGGCACGGGCAATTTCGCGTACTTCGACAACA CGCACACGACGCTGAGGCCCGAGCACTTCATGGCGTCGGGTGCGTTGCCGCCAGGCTTCGCGGCGGTCGAGATCGACGGC GAGTACTACTGGGACGGCGGTTTGATGTCGAATACGCCGCTCTACGAGGTGATCCAGTCCACGCCGCGCCGCGACACGCT CGCGTTCCAGGTCGATCTCTGGAGCGCGATCGGGCCGGTACCGGACAACATCACCGACGTCCAGGGGCGCATGAAGGACA TCCAGTATTCGAGCCGCACGCGTCTCGTGACCGATATGCTCCAGCGGTCGCAGCGTTTCCGGCACGTATTGCACGAGGTG CTGGAACGCGTGCCCGCGGATCAGCGTGACGATCCGTGGTGCAAGCTCGCTGAAGATCTGTCGTGTTCGAAGCGCTACAA CGTGATTCATCTCATCTACCGTGAGAAAGAATACGAAGGGCATTACAAGGACTTCCAGTTCGGTCTTTCAACCATGCGTG AACACTGGCAAAGCGGTCTGGAGGATATTCGCCGTTCGCTTGTGCAGCCGGATTGGCTCGACATGCCGAATAACGACGCA GGCTTTGTCACGCACGATATCCACCGGGATTCGCGCTGA
Upstream 100 bases:
>100_bases GCGCAGACGGTGCTGTTCCTGTCCACCTTCCCGACGGCGGCGCTCACCGGGCAGTCCTTTATTGTGAGCCACGGCTGGTA TATGCAATAAGGAGGCGCGC
Downstream 100 bases:
>100_bases AGAACCGCACGGCCCATAAAAAAACGGCGCCCGGAAGGGCGCCGTTTTTACAAGCAAGTGCAAGTTCCATCAAAGCGCGT GCAATGCATGCCCGCGCTTT
Product: transpatatin- like phospholipase domain-containing protein
Products: NA
Alternate protein names: Patatin-Like Phospholipase; Esterase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Protein; Phospholipase Patatin Family; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; Alpha/Beta Hydrolase; Patatin-Like Phospholipase Family; Serine Protease; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Dehydrogenase/Reductase; Phospholipase Patatin Family Protein; Transpatatin- Like Phospholipase Domain-Containing Protein
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MAQRNLKRARVGAPGDGEGEGAGPAPAVHPGRHIHLPDYETVALMLQGGGALGAYQAGVFQGLHEAGIAPNWLAGISIGA LNTAIIAGNPPEKRVERLRQFWETICQPAFGPPLPTFIEHALFNSSEAIRKVFTATQAMGAIVEGQKGFFVPRFPPPLPT VSGPPQLASYYDTTPLKATLEALCDFDRINSRETRVSVGAVNCGTGNFAYFDNTHTTLRPEHFMASGALPPGFAAVEIDG EYYWDGGLMSNTPLYEVIQSTPRRDTLAFQVDLWSAIGPVPDNITDVQGRMKDIQYSSRTRLVTDMLQRSQRFRHVLHEV LERVPADQRDDPWCKLAEDLSCSKRYNVIHLIYREKEYEGHYKDFQFGLSTMREHWQSGLEDIRRSLVQPDWLDMPNNDA GFVTHDIHRDSR
Sequences:
>Translated_412_residues MAQRNLKRARVGAPGDGEGEGAGPAPAVHPGRHIHLPDYETVALMLQGGGALGAYQAGVFQGLHEAGIAPNWLAGISIGA LNTAIIAGNPPEKRVERLRQFWETICQPAFGPPLPTFIEHALFNSSEAIRKVFTATQAMGAIVEGQKGFFVPRFPPPLPT VSGPPQLASYYDTTPLKATLEALCDFDRINSRETRVSVGAVNCGTGNFAYFDNTHTTLRPEHFMASGALPPGFAAVEIDG EYYWDGGLMSNTPLYEVIQSTPRRDTLAFQVDLWSAIGPVPDNITDVQGRMKDIQYSSRTRLVTDMLQRSQRFRHVLHEV LERVPADQRDDPWCKLAEDLSCSKRYNVIHLIYREKEYEGHYKDFQFGLSTMREHWQSGLEDIRRSLVQPDWLDMPNNDA GFVTHDIHRDSR >Mature_411_residues AQRNLKRARVGAPGDGEGEGAGPAPAVHPGRHIHLPDYETVALMLQGGGALGAYQAGVFQGLHEAGIAPNWLAGISIGAL NTAIIAGNPPEKRVERLRQFWETICQPAFGPPLPTFIEHALFNSSEAIRKVFTATQAMGAIVEGQKGFFVPRFPPPLPTV SGPPQLASYYDTTPLKATLEALCDFDRINSRETRVSVGAVNCGTGNFAYFDNTHTTLRPEHFMASGALPPGFAAVEIDGE YYWDGGLMSNTPLYEVIQSTPRRDTLAFQVDLWSAIGPVPDNITDVQGRMKDIQYSSRTRLVTDMLQRSQRFRHVLHEVL ERVPADQRDDPWCKLAEDLSCSKRYNVIHLIYREKEYEGHYKDFQFGLSTMREHWQSGLEDIRRSLVQPDWLDMPNNDAG FVTHDIHRDSR
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45898; Mature: 45767
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRNLKRARVGAPGDGEGEGAGPAPAVHPGRHIHLPDYETVALMLQGGGALGAYQAGVF CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHH QGLHEAGIAPNWLAGISIGALNTAIIAGNPPEKRVERLRQFWETICQPAFGPPLPTFIEH HHHHHHCCCCCHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ALFNSSEAIRKVFTATQAMGAIVEGQKGFFVPRFPPPLPTVSGPPQLASYYDTTPLKATL HHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHCCCCCHHHHH EALCDFDRINSRETRVSVGAVNCGTGNFAYFDNTHTTLRPEHFMASGALPPGFAAVEIDG HHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHHCCCCCCCCEEEEECC EYYWDGGLMSNTPLYEVIQSTPRRDTLAFQVDLWSAIGPVPDNITDVQGRMKDIQYSSRT EEEECCCCCCCCHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHH RLVTDMLQRSQRFRHVLHEVLERVPADQRDDPWCKLAEDLSCSKRYNVIHLIYREKEYEG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCC HYKDFQFGLSTMREHWQSGLEDIRRSLVQPDWLDMPNNDAGFVTHDIHRDSR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure AQRNLKRARVGAPGDGEGEGAGPAPAVHPGRHIHLPDYETVALMLQGGGALGAYQAGVF CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHH QGLHEAGIAPNWLAGISIGALNTAIIAGNPPEKRVERLRQFWETICQPAFGPPLPTFIEH HHHHHHCCCCCHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ALFNSSEAIRKVFTATQAMGAIVEGQKGFFVPRFPPPLPTVSGPPQLASYYDTTPLKATL HHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHCCCCCHHHHH EALCDFDRINSRETRVSVGAVNCGTGNFAYFDNTHTTLRPEHFMASGALPPGFAAVEIDG HHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHHHCCCCCCCCEEEEECC EYYWDGGLMSNTPLYEVIQSTPRRDTLAFQVDLWSAIGPVPDNITDVQGRMKDIQYSSRT EEEECCCCCCCCHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHH RLVTDMLQRSQRFRHVLHEVLERVPADQRDDPWCKLAEDLSCSKRYNVIHLIYREKEYEG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCC HYKDFQFGLSTMREHWQSGLEDIRRSLVQPDWLDMPNNDAGFVTHDIHRDSR CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA