| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782647
Identifier: 91782647
GI number: 91782647
Start: 1418479
End: 1419633
Strand: Direct
Name: 91782647
Synonym: Bxe_A3179
Alternate gene names: NA
Gene position: 1418479-1419633 (Clockwise)
Preceding gene: 91782646
Following gene: 91782652
Centisome position: 28.97
GC content: 62.16
Gene sequence:
>1155_bases ATGACGTTATCCATTACGAGCCACTTCGACGCAGGCGCGATCGAGGTGCTGTCCTGTGAAGAAGCGGGCAAGATCCGTTT GCGCGTGCGGCCGGACAGCCATGCCGAGTTTGCGCAGTGGTTCTACTTCCGGTTATCCGGCGCGGCGGGCGAGCGCTGTG TGATGACCTTCGAAAATGCCGCCGCGTGCGCTTTTGCCGAAGGCTGGCGCGACTATCAGGCCGTGGCGAGCTATGACCGG GTGAACTGGTTCCGTGTGCCTACGTCGTACGACGGCCGCGTGTTGACAATCGATCACACGCCGGATTTCGACCGTATTTA CTACGCGTATTTCGAGCCGTACAGCGAGGAGCGTCATTCGGAGTTTCTGGGCGCGGTGCAGCAGATGCCGCAGGCGACGC TCACGGAATTGGGCACGACCGTCGAAGGCCGGCCCATGTCGTTGCTCACGCTCGGCACGCCGCAAACCGGCGACACGCCC AAAAAGAAGATCTGGCTGATCGCGCGCCAGCACCCCGGCGAGACAATGGCCGAATGGTTTATCGAAGGTCTCGTGAAGCG GCTCGCAGGTTGGGGCGATTGGGCGGGAGACCCGGTGGCGCGCAAGCTCTACGATCACGCTGTCTTCTATATCGTGCCGA ATATGAATCCGGACGGCAGCGTGCACGGCAATCTGCGCACGAATGCGGCTGGCGCGAATCTGAATCGCGAATGGATGGAG CCGGATGCCGCGCGCAGCCCCGAGGTGCTGGTGGTGCGCGACGCGATTCACGCCACCGGCTGCGACCTGTTCTTCGATAT TCACGGCGACGAAGCGCTGCCTTACGTGTTCGTGGCCGGCTCCGAAATGCTGCCGGGTTTCACCGAGCGGCAGCGGGAAG AGCAGCAGGCGTTTATCGAAGCGTTCAAGCATGCGAGCCCCGATTTCCAGGACAAGCACGGCTACGCCGCGAGCAAATAT CGCGAGGACGCACTGAAGCTGGCGTCGAAGTACATCGGCAACGAATTCGGCTGCCTGTCGCTGACCCTGGAGATGCCGTT CAAGGACAACGCCAATCTGCCCGACGAACGGGTGGGCTGGAACGGCGAGCGTAGCGCGTCGCTTGGCGCCGCGATGCTTC AGGCGATCTTGCGGCACGTGGAGACGTTTGCTTAA
Upstream 100 bases:
>100_bases TGCGTTCGACGCCGAAGCGTCGAACGATTCCACTTACGTATTCCGCCGCCGCGTCGCTGAATAAGCGTTTCGCCGCGCCC ACAAGCAGGGAAGAAACATC
Downstream 100 bases:
>100_bases ACCGTGTTCCGCATAAAAAACGAGGCACACACCATGAAGCGTGTGCCTCGTTTTTCATTGCGTCACCCGTCGGACCGGCG GCTCGGGCGACATGATGCCG
Product: zinc carboxypeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTLSITSHFDAGAIEVLSCEEAGKIRLRVRPDSHAEFAQWFYFRLSGAAGERCVMTFENAAACAFAEGWRDYQAVASYDR VNWFRVPTSYDGRVLTIDHTPDFDRIYYAYFEPYSEERHSEFLGAVQQMPQATLTELGTTVEGRPMSLLTLGTPQTGDTP KKKIWLIARQHPGETMAEWFIEGLVKRLAGWGDWAGDPVARKLYDHAVFYIVPNMNPDGSVHGNLRTNAAGANLNREWME PDAARSPEVLVVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPGFTERQREEQQAFIEAFKHASPDFQDKHGYAASKY REDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDERVGWNGERSASLGAAMLQAILRHVETFA
Sequences:
>Translated_384_residues MTLSITSHFDAGAIEVLSCEEAGKIRLRVRPDSHAEFAQWFYFRLSGAAGERCVMTFENAAACAFAEGWRDYQAVASYDR VNWFRVPTSYDGRVLTIDHTPDFDRIYYAYFEPYSEERHSEFLGAVQQMPQATLTELGTTVEGRPMSLLTLGTPQTGDTP KKKIWLIARQHPGETMAEWFIEGLVKRLAGWGDWAGDPVARKLYDHAVFYIVPNMNPDGSVHGNLRTNAAGANLNREWME PDAARSPEVLVVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPGFTERQREEQQAFIEAFKHASPDFQDKHGYAASKY REDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDERVGWNGERSASLGAAMLQAILRHVETFA >Mature_383_residues TLSITSHFDAGAIEVLSCEEAGKIRLRVRPDSHAEFAQWFYFRLSGAAGERCVMTFENAAACAFAEGWRDYQAVASYDRV NWFRVPTSYDGRVLTIDHTPDFDRIYYAYFEPYSEERHSEFLGAVQQMPQATLTELGTTVEGRPMSLLTLGTPQTGDTPK KKIWLIARQHPGETMAEWFIEGLVKRLAGWGDWAGDPVARKLYDHAVFYIVPNMNPDGSVHGNLRTNAAGANLNREWMEP DAARSPEVLVVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPGFTERQREEQQAFIEAFKHASPDFQDKHGYAASKYR EDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDERVGWNGERSASLGAAMLQAILRHVETFA
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190194403, Length=370, Percent_Identity=26.4864864864865, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI222352158, Length=313, Percent_Identity=26.517571884984, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI120444924, Length=207, Percent_Identity=28.0193236714976, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI31657119, Length=313, Percent_Identity=25.5591054313099, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI170763513, Length=329, Percent_Identity=24.0121580547112, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115533904, Length=366, Percent_Identity=25.6830601092896, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193202888, Length=191, Percent_Identity=31.413612565445, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI28571179, Length=298, Percent_Identity=26.510067114094, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24641847, Length=298, Percent_Identity=26.510067114094, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI161077807, Length=322, Percent_Identity=25.776397515528, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24641845, Length=298, Percent_Identity=26.510067114094, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 43125; Mature: 42994
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSITSHFDAGAIEVLSCEEAGKIRLRVRPDSHAEFAQWFYFRLSGAAGERCVMTFENA CEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHEEECCCCCCEEEEEECCC AACAFAEGWRDYQAVASYDRVNWFRVPTSYDGRVLTIDHTPDFDRIYYAYFEPYSEERHS HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHH EFLGAVQQMPQATLTELGTTVEGRPMSLLTLGTPQTGDTPKKKIWLIARQHPGETMAEWF HHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH IEGLVKRLAGWGDWAGDPVARKLYDHAVFYIVPNMNPDGSVHGNLRTNAAGANLNREWME HHHHHHHHCCCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCCCCEECCCCCCCCCHHHCC PDAARSPEVLVVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPGFTERQREEQQAFIE CCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH AFKHASPDFQDKHGYAASKYREDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDERVGW HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCC NGERSASLGAAMLQAILRHVETFA CCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLSITSHFDAGAIEVLSCEEAGKIRLRVRPDSHAEFAQWFYFRLSGAAGERCVMTFENA EEEEECCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHEEECCCCCCEEEEEECCC AACAFAEGWRDYQAVASYDRVNWFRVPTSYDGRVLTIDHTPDFDRIYYAYFEPYSEERHS HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHH EFLGAVQQMPQATLTELGTTVEGRPMSLLTLGTPQTGDTPKKKIWLIARQHPGETMAEWF HHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH IEGLVKRLAGWGDWAGDPVARKLYDHAVFYIVPNMNPDGSVHGNLRTNAAGANLNREWME HHHHHHHHCCCCCCCCCHHHHHHHHCEEEEEECCCCCCCCCCCCEECCCCCCCCCHHHCC PDAARSPEVLVVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPGFTERQREEQQAFIE CCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH AFKHASPDFQDKHGYAASKYREDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDERVGW HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCC NGERSASLGAAMLQAILRHVETFA CCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]