| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782629
Identifier: 91782629
GI number: 91782629
Start: 1399905
End: 1400708
Strand: Direct
Name: 91782629
Synonym: Bxe_A3197
Alternate gene names: NA
Gene position: 1399905-1400708 (Clockwise)
Preceding gene: 91782627
Following gene: 91782630
Centisome position: 28.59
GC content: 62.06
Gene sequence:
>804_bases ATGAACTCATCGATGAATAGCGGCACGAGCGTCGTCTTTTTACAGCGGACACTGGCACAGGAAAATCCACGCCTGAAAGT GGACGGTCTGTCGGGCCCCGACACGCAAAGCGCGCTGCGGCGATTCCAGCAGCGGCGTGGCTTGCCGGACACCGGCATGG TGTGCGAGCAGACTCGCGCTCTGCTCACGCAAGCGGCACGCCATGCGGGATTGCTATCCGAAGCGGACGTGGCGGAAGTC AGCGACGCGCTAGGCGTTGCGTCAGCAAGGCTTCTCGCACTGATCGAGGTCGAGAGCGCGGGCTTTGGCTTCCTGCCGGA TGCCCGCGCGAAGATCCTGTTCGAACGCCATGTGATGTACCGGCGGCTGGTCGCCGCGGCGCTGCCCGCGCAACGGTGGC GCAGCGAATTTCCTGAGATCGTCAATACGACACCCGGAGGCTATCTGGGCGGCGAGCAGGAATACGAACGTTTTGACGCA GCCAGCGCGCTCGATTCCGATTGCGCGATCGAAGCCTGCAGCTGGGGGTTATTCCAGGTCATGGGCCTTCATTGGCTGTA TCTGGATTATGCCAGTGCGTCCGACTTTGCCGCGTCGATGACCATTGATGAGCGCAGCCAGCTCGACGCATTCGTTCGTT TCATCGAGCGCGACGCCGCGATGCTGCACGCGTTGCAGCAGGGAAGGTGGGACGACTTTGCGCGACGCTACAACGGTCCG GCCTATCACACACATGCCTATGACACACGACTGGCGTCAGCGGTCGCGCATTTCGACGCCGTGACTTGTGGAGGAGCGGC ATAG
Upstream 100 bases:
>100_bases CTTCTATGGCGGACGCGGACCGGAGGAAAAACAATCGCATCGCGGCAGCAGTTAGCTTTCCTGTCCGCCGCGACTTTTTT CCACCTCACGGTTACCGATC
Downstream 100 bases:
>100_bases GCGGGGTGAGATAGCCGATCGTCTACGTGGCCGGCGTGCGGAGCGCGAATTTTCGATGGATTCTCCATGTCGTTCGTCGA TGAGGCATCCGAACATGAAC
Product: putative phage-related protein (hydrolase)
Products: NA
Alternate protein names: Phage-Related Cell Wall Hydrolase; Bacteriophage-Acquired Protein; Lytic Transglycosylase Catalytic; Phage-Like Protein; DNA-Directed RNA Polymerase Beta Chain; Lytic Phage PhiCTX_orf; Gp43 Bacteriophage-Acquired Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNSSMNSGTSVVFLQRTLAQENPRLKVDGLSGPDTQSALRRFQQRRGLPDTGMVCEQTRALLTQAARHAGLLSEADVAEV SDALGVASARLLALIEVESAGFGFLPDARAKILFERHVMYRRLVAAALPAQRWRSEFPEIVNTTPGGYLGGEQEYERFDA ASALDSDCAIEACSWGLFQVMGLHWLYLDYASASDFAASMTIDERSQLDAFVRFIERDAAMLHALQQGRWDDFARRYNGP AYHTHAYDTRLASAVAHFDAVTCGGAA
Sequences:
>Translated_267_residues MNSSMNSGTSVVFLQRTLAQENPRLKVDGLSGPDTQSALRRFQQRRGLPDTGMVCEQTRALLTQAARHAGLLSEADVAEV SDALGVASARLLALIEVESAGFGFLPDARAKILFERHVMYRRLVAAALPAQRWRSEFPEIVNTTPGGYLGGEQEYERFDA ASALDSDCAIEACSWGLFQVMGLHWLYLDYASASDFAASMTIDERSQLDAFVRFIERDAAMLHALQQGRWDDFARRYNGP AYHTHAYDTRLASAVAHFDAVTCGGAA >Mature_267_residues MNSSMNSGTSVVFLQRTLAQENPRLKVDGLSGPDTQSALRRFQQRRGLPDTGMVCEQTRALLTQAARHAGLLSEADVAEV SDALGVASARLLALIEVESAGFGFLPDARAKILFERHVMYRRLVAAALPAQRWRSEFPEIVNTTPGGYLGGEQEYERFDA ASALDSDCAIEACSWGLFQVMGLHWLYLDYASASDFAASMTIDERSQLDAFVRFIERDAAMLHALQQGRWDDFARRYNGP AYHTHAYDTRLASAVAHFDAVTCGGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29343; Mature: 29343
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSMNSGTSVVFLQRTLAQENPRLKVDGLSGPDTQSALRRFQQRRGLPDTGMVCEQTRA CCCCCCCCCEEEEHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LLTQAARHAGLLSEADVAEVSDALGVASARLLALIEVESAGFGFLPDARAKILFERHVMY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHH RRLVAAALPAQRWRSEFPEIVNTTPGGYLGGEQEYERFDAASALDSDCAIEACSWGLFQV HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH MGLHWLYLDYASASDFAASMTIDERSQLDAFVRFIERDAAMLHALQQGRWDDFARRYNGP HHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC AYHTHAYDTRLASAVAHFDAVTCGGAA CEECHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNSSMNSGTSVVFLQRTLAQENPRLKVDGLSGPDTQSALRRFQQRRGLPDTGMVCEQTRA CCCCCCCCCEEEEHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LLTQAARHAGLLSEADVAEVSDALGVASARLLALIEVESAGFGFLPDARAKILFERHVMY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHH RRLVAAALPAQRWRSEFPEIVNTTPGGYLGGEQEYERFDAASALDSDCAIEACSWGLFQV HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH MGLHWLYLDYASASDFAASMTIDERSQLDAFVRFIERDAAMLHALQQGRWDDFARRYNGP HHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC AYHTHAYDTRLASAVAHFDAVTCGGAA CEECHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA