| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is nuoI [H]
Identifier: 91782620
GI number: 91782620
Start: 1390612
End: 1391100
Strand: Direct
Name: nuoI [H]
Synonym: Bxe_A3206
Alternate gene names: 91782620
Gene position: 1390612-1391100 (Clockwise)
Preceding gene: 91782619
Following gene: 91782621
Centisome position: 28.4
GC content: 57.46
Gene sequence:
>489_bases ATGACCGCAATCCAAAACTTTTTCAAGACCTTCTTCCTCACGGAGTTGCTCAAAGGCCTAGCGTTGACCGGACGTTATAC GTTCCAGCGCAAGGTGACGGTGCAATTTCCGGAAGAGAAGACCCCGATCTCGCCGCGTTTTCGCGGTCTGCATGCGCTGC GCCGCTATGAAAACGGTGAAGAACGCTGCATCGCCTGCAAGCTGTGCGAAGCGGTGTGTCCGGCGCTCGCCATTACGATC GAGTCGGAAACGCGCGCGGACAACACCCGCCGCACCACGCGCTACGACATCGACCTGACCAAGTGCATCTTCTGCGGTTT CTGCGAAGAGAGCTGCCCGGTCGATTCGATCGTCGAAACGCACATTCTCGAGTATCACGGCGAAAAGCGTGGCGACCTGT ACTTCACGAAAGACATGCTGCTGGCCGTTGGCGATCGCTATGAAACGGAGATCGCTGCGAACAAGGCAGCCGACGCACCG TATCGTTGA
Upstream 100 bases:
>100_bases CTGGAAGATCTTCATTCCGGTCTGCGTGGTGTGGCTGGTGGTAGTCGGCTTCTGGATCATGTCGCCGTTGAATATCTGGA AATAAAGGGCGGATGAACCC
Downstream 100 bases:
>100_bases AGCGCTTCGGTTGAAGCAGTCAATGCAGTGGTAAAAGCAGCAATCACGGCCTGTTGTCGGGCCGGGCGCCGCGGCCTGAA CGCCGCGGCACGGCGCACCT
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTAIQNFFKTFFLTELLKGLALTGRYTFQRKVTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITI ESETRADNTRRTTRYDIDLTKCIFCGFCEESCPVDSIVETHILEYHGEKRGDLYFTKDMLLAVGDRYETEIAANKAADAP YR
Sequences:
>Translated_162_residues MTAIQNFFKTFFLTELLKGLALTGRYTFQRKVTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITI ESETRADNTRRTTRYDIDLTKCIFCGFCEESCPVDSIVETHILEYHGEKRGDLYFTKDMLLAVGDRYETEIAANKAADAP YR >Mature_161_residues TAIQNFFKTFFLTELLKGLALTGRYTFQRKVTVQFPEEKTPISPRFRGLHALRRYENGEERCIACKLCEAVCPALAITIE SETRADNTRRTTRYDIDLTKCIFCGFCEESCPVDSIVETHILEYHGEKRGDLYFTKDMLLAVGDRYETEIAANKAADAPY R
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI4505371, Length=154, Percent_Identity=61.038961038961, Blast_Score=201, Evalue=2e-52, Organism=Escherichia coli, GI1788617, Length=139, Percent_Identity=37.410071942446, Blast_Score=98, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17555194, Length=155, Percent_Identity=56.7741935483871, Blast_Score=189, Evalue=6e-49, Organism=Drosophila melanogaster, GI17864306, Length=153, Percent_Identity=60.7843137254902, Blast_Score=199, Evalue=5e-52,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 18609; Mature: 18478
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIQNFFKTFFLTELLKGLALTGRYTFQRKVTVQFPEEKTPISPRFRGLHALRRYENGE CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC ERCIACKLCEAVCPALAITIESETRADNTRRTTRYDIDLTKCIFCGFCEESCPVDSIVET HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCHHHHHHH HILEYHGEKRGDLYFTKDMLLAVGDRYETEIAANKAADAPYR HHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure TAIQNFFKTFFLTELLKGLALTGRYTFQRKVTVQFPEEKTPISPRFRGLHALRRYENGE CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC ERCIACKLCEAVCPALAITIESETRADNTRRTTRYDIDLTKCIFCGFCEESCPVDSIVET HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCHHHHHHH HILEYHGEKRGDLYFTKDMLLAVGDRYETEIAANKAADAPYR HHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA