Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is sugE [H]

Identifier: 91782581

GI number: 91782581

Start: 1349469

End: 1349789

Strand: Direct

Name: sugE [H]

Synonym: Bxe_A3247

Alternate gene names: 91782581

Gene position: 1349469-1349789 (Clockwise)

Preceding gene: 91782580

Following gene: 91782582

Centisome position: 27.56

GC content: 62.31

Gene sequence:

>321_bases
ATGTCCTGGATTCTTCTGTTGATTGCCGGTTTGCTCGAGGTTGCATGGGCCGCCGGTCTCAAAACCTCCGAAGGTTTCAC
CCGTCTCTGGCCTTCCGTGTTCACGGTCGTGACCGCGCTCGGCAGTTTCGCGCTGCTCGCCATTGCCATGCGCCAGTTGC
CGCTCGGCACGGCCTACGCGGTGTGGACGGGCATCGGCGCAGTCGGCGCGTTCATCTTCGGGATCGTGATGATGGGCGAG
GCGTTGAGTGTTGCGCGGGTCGCCAGCGCGGCGCTGATCGTGATCGGATTAATCGGACTGAAGCTGTCTTCCGGCCATTG
A

Upstream 100 bases:

>100_bases
CCGCGGCTCTACGGCGATGTGGGTATAATTTACGGTTCGTAAGGACGACCTTGCGTTTTCACGAACGGGGACGGCCCCAT
CTGATCATGGAGCTTGTCTC

Downstream 100 bases:

>100_bases
GCGCGGCATTTCAACCTGCTGCCGGGCGTATTCAGCGGGTCCGCCGGCGCCCGCTTCGAGCTCGCCATTTATTCGCCGCT
CTGCGTTCTGCGAATTAACG

Product: small multidrug efflux pump

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSWILLLIAGLLEVAWAAGLKTSEGFTRLWPSVFTVVTALGSFALLAIAMRQLPLGTAYAVWTGIGAVGAFIFGIVMMGE
ALSVARVASAALIVIGLIGLKLSSGH

Sequences:

>Translated_106_residues
MSWILLLIAGLLEVAWAAGLKTSEGFTRLWPSVFTVVTALGSFALLAIAMRQLPLGTAYAVWTGIGAVGAFIFGIVMMGE
ALSVARVASAALIVIGLIGLKLSSGH
>Mature_105_residues
SWILLLIAGLLEVAWAAGLKTSEGFTRLWPSVFTVVTALGSFALLAIAMRQLPLGTAYAVWTGIGAVGAFIFGIVMMGEA
LSVARVASAALIVIGLIGLKLSSGH

Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082378, Length=104, Percent_Identity=67.3076923076923, Blast_Score=128, Evalue=9e-32,
Organism=Escherichia coli, GI1786755, Length=94, Percent_Identity=39.3617021276596, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000390 [H]

Pfam domain/function: PF00893 Multi_Drug_Res [H]

EC number: NA

Molecular weight: Translated: 10945; Mature: 10814

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWILLLIAGLLEVAWAAGLKTSEGFTRLWPSVFTVVTALGSFALLAIAMRQLPLGTAYA
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VWTGIGAVGAFIFGIVMMGEALSVARVASAALIVIGLIGLKLSSGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SWILLLIAGLLEVAWAAGLKTSEGFTRLWPSVFTVVTALGSFALLAIAMRQLPLGTAYA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VWTGIGAVGAFIFGIVMMGEALSVARVASAALIVIGLIGLKLSSGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]