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The map label for this gene is rfaF [C]

Identifier: 91782541

GI number: 91782541

Start: 1308277

End: 1309404

Strand: Direct

Name: rfaF [C]

Synonym: Bxe_A3288

Alternate gene names: 91782541

Gene position: 1308277-1309404 (Clockwise)

Preceding gene: 91782540

Following gene: 91782542

Centisome position: 26.72

GC content: 66.93

Gene sequence:

>1128_bases
ATGAGTCGGCTTGCCGGGCGTCTTCGTATTTTTGCGCGGGCCATTCCGCGACTGCTGATCAAGCCATTGCGCCGCGAGCC
GCGGCACCCGCGCCGTATCCTGATTGCGCACCACCTGTTGCTTGGCGACACGCTGCTGCTCACGCCGCTGCTCGCCAAGC
TGCGCGCACAATATCCGCAAGCTCAGATCGTTCTCGCCTGTCCGAAGGCGATTGTGCCGCTGTATGCCGGCCGGCCTTTC
GGTGTCGCGGCGTTGCCGTTCGATCCGCGTGATCCGCAGTCGGTGCGGGACGTTCTGCTTTCCGGACCTTACGACCTCGG
CATGGTGCTCGGCGACAATCGTCACAGCTGGCTCGCGCTGGGCGCGGGCTGCCGCTGGATCGTCGGACACGCGGGCGACG
AGCCGGCCTGGAAGAACTGGCCGCTCAACCGGAGCGTGCCGTATCCCGCTGCGCCGGCGGCCTGGGCCGACCTCGCCGCG
GAACTGATCGAGGGACCGCCGCCGCGTGCTTACCGGCCTGCCGATTGGTCCGCGCCGCAGCATGCGGCTTTGCCCGAGGC
ATCGCAGCTCGCGAAACCTTATGTGGTGCTTCATCCGGGCGCGAGCACGCGTGTCAAGCGCTGGCCCAACGCGCGCTGGC
GCGAACTCGCGCAACGCGTGGAAGCGCTCGGCTATCTGCCGGTCTGGACTGGCGGTCCGGGTGAAGCCGAACTGATTCGC
GAGATCGACCCTGACCTTCGTCATCCGAACCTGGCGGCGCGGCTCGGCCTCGGCGAGCTGTGGCATCTGTTTGCCGGCGC
GCAAGCCGTGGTTTGTCCCGATACCGGCGTCGCGCATCTGGGGCGTCTGATCGGGGTGCCCACCGTCGTGCTGTTCGGCC
CCGGCAATGCCTCGATCCACGGGGCGGGGCGCTACTGGCGCGAGGTGCCGTTCGTGCCCATTACGATCGCGGAGATGCCG
TGCCGCGATCAGCCGTTTATTTTCCGCCGCAAGGTAGCATGGGTGCGGCGCTGTGATCGCAACGAGACGACCTGCGTCGC
ATGGCGCGGCGACCATGCCGACTGCATGGGCCGGCTGTCCGTGGAGTCGGTGTACAACGCATTGCAAAATGTTCTGGTGA
AAGTGTAA

Upstream 100 bases:

>100_bases
GGGAAGAATACCGCTGGAGATTGTGCATGGCGAACGCGACCTCGCGCCGGGTAACGGCGTACAGCAAGATCGCGGCGGGG
ACAAACGCGCCGATGAGCCC

Downstream 100 bases:

>100_bases
TGACTCACACGGCTGCGCGAGTGGAGCGCGTGTTATGGGTTGCGTGTCCCGTCATTCTGTTCGTGGTGATGTTCGGCCAC
ATGACGGCGCTCGTCTTCAA

Product: putative lipopolysaccharide core biosynthesis glycosyltransferase protein

Products: NA

Alternate protein names: Glycosyltransferase; Family 9 Glycosyl Transferase; Heptosyltransferase Family Protein; Transferase; ADP-Heptose; Lipopolysaccharide Core Biosynthesis Heptosyltransferase; ADP-Heptose-Lipooligosaccharide Heptosyltransferase II; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSRLAGRLRIFARAIPRLLIKPLRREPRHPRRILIAHHLLLGDTLLLTPLLAKLRAQYPQAQIVLACPKAIVPLYAGRPF
GVAALPFDPRDPQSVRDVLLSGPYDLGMVLGDNRHSWLALGAGCRWIVGHAGDEPAWKNWPLNRSVPYPAAPAAWADLAA
ELIEGPPPRAYRPADWSAPQHAALPEASQLAKPYVVLHPGASTRVKRWPNARWRELAQRVEALGYLPVWTGGPGEAELIR
EIDPDLRHPNLAARLGLGELWHLFAGAQAVVCPDTGVAHLGRLIGVPTVVLFGPGNASIHGAGRYWREVPFVPITIAEMP
CRDQPFIFRRKVAWVRRCDRNETTCVAWRGDHADCMGRLSVESVYNALQNVLVKV

Sequences:

>Translated_375_residues
MSRLAGRLRIFARAIPRLLIKPLRREPRHPRRILIAHHLLLGDTLLLTPLLAKLRAQYPQAQIVLACPKAIVPLYAGRPF
GVAALPFDPRDPQSVRDVLLSGPYDLGMVLGDNRHSWLALGAGCRWIVGHAGDEPAWKNWPLNRSVPYPAAPAAWADLAA
ELIEGPPPRAYRPADWSAPQHAALPEASQLAKPYVVLHPGASTRVKRWPNARWRELAQRVEALGYLPVWTGGPGEAELIR
EIDPDLRHPNLAARLGLGELWHLFAGAQAVVCPDTGVAHLGRLIGVPTVVLFGPGNASIHGAGRYWREVPFVPITIAEMP
CRDQPFIFRRKVAWVRRCDRNETTCVAWRGDHADCMGRLSVESVYNALQNVLVKV
>Mature_374_residues
SRLAGRLRIFARAIPRLLIKPLRREPRHPRRILIAHHLLLGDTLLLTPLLAKLRAQYPQAQIVLACPKAIVPLYAGRPFG
VAALPFDPRDPQSVRDVLLSGPYDLGMVLGDNRHSWLALGAGCRWIVGHAGDEPAWKNWPLNRSVPYPAAPAAWADLAAE
LIEGPPPRAYRPADWSAPQHAALPEASQLAKPYVVLHPGASTRVKRWPNARWRELAQRVEALGYLPVWTGGPGEAELIRE
IDPDLRHPNLAARLGLGELWHLFAGAQAVVCPDTGVAHLGRLIGVPTVVLFGPGNASIHGAGRYWREVPFVPITIAEMPC
RDQPFIFRRKVAWVRRCDRNETTCVAWRGDHADCMGRLSVESVYNALQNVLVKV

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41540; Mature: 41409

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLAGRLRIFARAIPRLLIKPLRREPRHPRRILIAHHLLLGDTLLLTPLLAKLRAQYPQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
AQIVLACPKAIVPLYAGRPFGVAALPFDPRDPQSVRDVLLSGPYDLGMVLGDNRHSWLAL
CEEEEECCHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEE
GAGCRWIVGHAGDEPAWKNWPLNRSVPYPAAPAAWADLAAELIEGPPPRAYRPADWSAPQ
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HAALPEASQLAKPYVVLHPGASTRVKRWPNARWRELAQRVEALGYLPVWTGGPGEAELIR
CCCCCCHHHHCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHH
EIDPDLRHPNLAARLGLGELWHLFAGAQAVVCPDTGVAHLGRLIGVPTVVLFGPGNASIH
HCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCCEE
GAGRYWREVPFVPITIAEMPCRDQPFIFRRKVAWVRRCDRNETTCVAWRGDHADCMGRLS
CCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
VESVYNALQNVLVKV
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRLAGRLRIFARAIPRLLIKPLRREPRHPRRILIAHHLLLGDTLLLTPLLAKLRAQYPQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
AQIVLACPKAIVPLYAGRPFGVAALPFDPRDPQSVRDVLLSGPYDLGMVLGDNRHSWLAL
CEEEEECCHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEE
GAGCRWIVGHAGDEPAWKNWPLNRSVPYPAAPAAWADLAAELIEGPPPRAYRPADWSAPQ
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
HAALPEASQLAKPYVVLHPGASTRVKRWPNARWRELAQRVEALGYLPVWTGGPGEAELIR
CCCCCCHHHHCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHH
EIDPDLRHPNLAARLGLGELWHLFAGAQAVVCPDTGVAHLGRLIGVPTVVLFGPGNASIH
HCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCCEE
GAGRYWREVPFVPITIAEMPCRDQPFIFRRKVAWVRRCDRNETTCVAWRGDHADCMGRLS
CCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
VESVYNALQNVLVKV
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA