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The map label for this gene is yccS [H]

Identifier: 91782432

GI number: 91782432

Start: 1176541

End: 1178643

Strand: Direct

Name: yccS [H]

Synonym: Bxe_A3399

Alternate gene names: 91782432

Gene position: 1176541-1178643 (Clockwise)

Preceding gene: 91782431

Following gene: 91782435

Centisome position: 24.03

GC content: 66.29

Gene sequence:

>2103_bases
ATGCTGAATCGCAAGTCCAACCCGTCGTCGTCTTCTTCGCAGCGCTGGTCGAACTGGCTGTATGCAGTCGCCAATGCGAT
TTACCGCAAACGGCCGGTATGGATGGTGTCGTTTTCGGCGAGCGAGGCCAGTCTGTCGGAAGGTTTGCGGGCGGCCTGCG
CATCCACGGCCATGCTTGCGCTCGGCAATGTGCTGCACGAACCGACCTTCGCGTGGGCGGCGATCGGCGCCTTCTGGACC
TGTCTCGCCGACGCCGCCGGTTCCAACCGCGCCCGCTTCGCGTCGATGATGGGCTTCGCCGTGCTGTCCACGCTATGCGG
CGGCTTGACGGCTTTCGCCTCCGCAGCCGGGACCGTGTTCGCCGCGCTTGCGTTGCTGGTCTTCACGAGTCTCGGCGCGT
TCGGCCGGATCTGGGGCGCCGCCACTGCACAGGTGACGATTCTCGTCGCCACCGCGTGCGTCGTGATGGTCGACCGGCCA
ATGCACGACGTTCGGCAAGGCATGGCGTTTCTCGGCGTCTACCTGATCGGCTGCCTGTTTGCCGTGGCGCTGAGTCTGAC
GGTCTGGCGCATTCACCCGTTCAGTACGAGCCGCTCGACACTGCGCGCCGTGTACCTGCGTCTGGCCGATATCGCGTTGG
ACAGCGCCCGGCTGCTGGAGCGGCGCGCGGCCCGCGGCGAGTGGGCCACGCACGCCGCGAAGTTTCGCGCCGATGCCCGC
GCTGCGCTCGAACGCTCGCGCAAAGTGCTGGCGCGGGTGCCCGCATCGAGAACGGGCGGCCGTGAAACCTACGACACGCT
GCTCGGCTTGCTGACCGACAGCGAAGCATTGTTCGCGTATCTGATCGCCGTCTCCGGCGCATGCGAACGAGCCCCGGACG
ACGCATGGCGCGCGAAACGCGCAGTCCGGTTGCTGACGGCCACGGGCGACGTGCTGCGCGGCATCGGCGCGGCAGTCAAT
GACGGACAGTGGGCGCGTCTTACCGATTTGCAATTGCGCTTGCGGCGTTTTGCCAGGCGGCTCGAAACCGCGTTGATGGA
ACCCGTGAAGCTGAAGTCCGATTTCGAACTGGTCGACTTCACGCCGGTGTATGCGGAGGCGGAAAGCTGGCGTGCTAGCG
CGACGCGGCTTTTCACGCGCATCTGGGCCACGCTCAAGGCCAACCTGTCGGCCGACTCGGTCGGCTTGCGGCATGCGGCC
CGCGTCGGCGTGACGACCACGGCGGGCTTTCTCGTGATTCGCGCGCTCGGGCTGCCGTTCGGCTACTGGGCCACGATGGC
GACGCTGCTGATCTTGCAACCGTCGATTGCCGCTACGTGGCCGCGCAGTATCGAACGGGCCGCGGGCAGCATTGTCGGCG
GCGTGCTGGCGGCGGCTATCGGCTACGCGATCCATTCGCCGCTCGGCATTTCCCTCGCGGTGTTTCCGCTGGTGATGGCG
ACAATGGCGCTGCGTCCGGTCAGCTACAGCCTGTTCGTGCTGTTCCTCACGCCGACCTTCGTGCTGGTCGCCGACTTCGC
GACGCCGGGCGCCAGCGAATTCGCCTATGCGATCACGCGGCTCGGCAACAATGTGCTCGGCTGCGTATTGGCGCTGCTGG
CCACGTTCTATCTGTGGCCGACGCGCGAAAAGATCGACTACCGCGCGTATCTGGGCGAGGCGGTGCGCGCCAATCTCGCG
TATTTGAGAGCCGCGCTGGAGTCGCCCCGTCGCAGCGAGAAGGAGATGGAACGCTTGCGCCGGGCCGCCGGTTTGGGCAG
CAATAACGCAGAGGAAGCCATCGGCCGGATGCGCCTCGAAAAACTAGAGGACTCGATGGTCGATACCGTGACGCTGACAG
TGCTGAGCGTATTGCGCAGAATGGCCGGCACTGCGACGCAACTGCGGCTGAGCACGAACCGGCGCGATATGCACGATGAA
CTCGGCGCGTGGATCGCGACCGTGAGCGCGGATATCGACGCCGCGTTGAATCGGACCTTGCGGCCGGTTCGTCACGCGCT
GCCCGCGCGCGACGGGCTGACTTCGCTGGAGGCGGATGCGGTGGGCGAGCTTGCGCTGATGCATCGGCTGCTCAATGAGC
GGATGCGCGAGGCGAGGGGGTAG

Upstream 100 bases:

>100_bases
AAACCCTTATGATTGACCGCCTGCCGCGCCTGCCTGCGGTAAGGCTATTTCAACGCGCTGACGTAGCGCCAATCCGCGTT
CCAGGGAGCACACCGTCCGG

Downstream 100 bases:

>100_bases
CGAGGCGGCGCGAAGAAGCGGGACGATGAAGCTGAGGCTGTTTCAGGTCGCGCGGGTGGCTTCTTGAGTCTGCCCGGCTT
CGATCGCTTCGGGCTGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 700

Protein sequence:

>700_residues
MLNRKSNPSSSSSQRWSNWLYAVANAIYRKRPVWMVSFSASEASLSEGLRAACASTAMLALGNVLHEPTFAWAAIGAFWT
CLADAAGSNRARFASMMGFAVLSTLCGGLTAFASAAGTVFAALALLVFTSLGAFGRIWGAATAQVTILVATACVVMVDRP
MHDVRQGMAFLGVYLIGCLFAVALSLTVWRIHPFSTSRSTLRAVYLRLADIALDSARLLERRAARGEWATHAAKFRADAR
AALERSRKVLARVPASRTGGRETYDTLLGLLTDSEALFAYLIAVSGACERAPDDAWRAKRAVRLLTATGDVLRGIGAAVN
DGQWARLTDLQLRLRRFARRLETALMEPVKLKSDFELVDFTPVYAEAESWRASATRLFTRIWATLKANLSADSVGLRHAA
RVGVTTTAGFLVIRALGLPFGYWATMATLLILQPSIAATWPRSIERAAGSIVGGVLAAAIGYAIHSPLGISLAVFPLVMA
TMALRPVSYSLFVLFLTPTFVLVADFATPGASEFAYAITRLGNNVLGCVLALLATFYLWPTREKIDYRAYLGEAVRANLA
YLRAALESPRRSEKEMERLRRAAGLGSNNAEEAIGRMRLEKLEDSMVDTVTLTVLSVLRRMAGTATQLRLSTNRRDMHDE
LGAWIATVSADIDAALNRTLRPVRHALPARDGLTSLEADAVGELALMHRLLNERMREARG

Sequences:

>Translated_700_residues
MLNRKSNPSSSSSQRWSNWLYAVANAIYRKRPVWMVSFSASEASLSEGLRAACASTAMLALGNVLHEPTFAWAAIGAFWT
CLADAAGSNRARFASMMGFAVLSTLCGGLTAFASAAGTVFAALALLVFTSLGAFGRIWGAATAQVTILVATACVVMVDRP
MHDVRQGMAFLGVYLIGCLFAVALSLTVWRIHPFSTSRSTLRAVYLRLADIALDSARLLERRAARGEWATHAAKFRADAR
AALERSRKVLARVPASRTGGRETYDTLLGLLTDSEALFAYLIAVSGACERAPDDAWRAKRAVRLLTATGDVLRGIGAAVN
DGQWARLTDLQLRLRRFARRLETALMEPVKLKSDFELVDFTPVYAEAESWRASATRLFTRIWATLKANLSADSVGLRHAA
RVGVTTTAGFLVIRALGLPFGYWATMATLLILQPSIAATWPRSIERAAGSIVGGVLAAAIGYAIHSPLGISLAVFPLVMA
TMALRPVSYSLFVLFLTPTFVLVADFATPGASEFAYAITRLGNNVLGCVLALLATFYLWPTREKIDYRAYLGEAVRANLA
YLRAALESPRRSEKEMERLRRAAGLGSNNAEEAIGRMRLEKLEDSMVDTVTLTVLSVLRRMAGTATQLRLSTNRRDMHDE
LGAWIATVSADIDAALNRTLRPVRHALPARDGLTSLEADAVGELALMHRLLNERMREARG
>Mature_700_residues
MLNRKSNPSSSSSQRWSNWLYAVANAIYRKRPVWMVSFSASEASLSEGLRAACASTAMLALGNVLHEPTFAWAAIGAFWT
CLADAAGSNRARFASMMGFAVLSTLCGGLTAFASAAGTVFAALALLVFTSLGAFGRIWGAATAQVTILVATACVVMVDRP
MHDVRQGMAFLGVYLIGCLFAVALSLTVWRIHPFSTSRSTLRAVYLRLADIALDSARLLERRAARGEWATHAAKFRADAR
AALERSRKVLARVPASRTGGRETYDTLLGLLTDSEALFAYLIAVSGACERAPDDAWRAKRAVRLLTATGDVLRGIGAAVN
DGQWARLTDLQLRLRRFARRLETALMEPVKLKSDFELVDFTPVYAEAESWRASATRLFTRIWATLKANLSADSVGLRHAA
RVGVTTTAGFLVIRALGLPFGYWATMATLLILQPSIAATWPRSIERAAGSIVGGVLAAAIGYAIHSPLGISLAVFPLVMA
TMALRPVSYSLFVLFLTPTFVLVADFATPGASEFAYAITRLGNNVLGCVLALLATFYLWPTREKIDYRAYLGEAVRANLA
YLRAALESPRRSEKEMERLRRAAGLGSNNAEEAIGRMRLEKLEDSMVDTVTLTVLSVLRRMAGTATQLRLSTNRRDMHDE
LGAWIATVSADIDAALNRTLRPVRHALPARDGLTSLEADAVGELALMHRLLNERMREARG

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=188, Percent_Identity=28.1914893617021, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87082248, Length=198, Percent_Identity=28.7878787878788, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76025; Mature: 76025

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRKSNPSSSSSQRWSNWLYAVANAIYRKRPVWMVSFSASEASLSEGLRAACASTAMLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LGNVLHEPTFAWAAIGAFWTCLADAAGSNRARFASMMGFAVLSTLCGGLTAFASAAGTVF
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALALLVFTSLGAFGRIWGAATAQVTILVATACVVMVDRPMHDVRQGMAFLGVYLIGCLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AVALSLTVWRIHPFSTSRSTLRAVYLRLADIALDSARLLERRAARGEWATHAAKFRADAR
HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AALERSRKVLARVPASRTGGRETYDTLLGLLTDSEALFAYLIAVSGACERAPDDAWRAKR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
AVRLLTATGDVLRGIGAAVNDGQWARLTDLQLRLRRFARRLETALMEPVKLKSDFELVDF
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEC
TPVYAEAESWRASATRLFTRIWATLKANLSADSVGLRHAARVGVTTTAGFLVIRALGLPF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCH
GYWATMATLLILQPSIAATWPRSIERAAGSIVGGVLAAAIGYAIHSPLGISLAVFPLVMA
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TMALRPVSYSLFVLFLTPTFVLVADFATPGASEFAYAITRLGNNVLGCVLALLATFYLWP
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
TREKIDYRAYLGEAVRANLAYLRAALESPRRSEKEMERLRRAAGLGSNNAEEAIGRMRLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KLEDSMVDTVTLTVLSVLRRMAGTATQLRLSTNRRDMHDELGAWIATVSADIDAALNRTL
HHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RPVRHALPARDGLTSLEADAVGELALMHRLLNERMREARG
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNRKSNPSSSSSQRWSNWLYAVANAIYRKRPVWMVSFSASEASLSEGLRAACASTAMLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
LGNVLHEPTFAWAAIGAFWTCLADAAGSNRARFASMMGFAVLSTLCGGLTAFASAAGTVF
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALALLVFTSLGAFGRIWGAATAQVTILVATACVVMVDRPMHDVRQGMAFLGVYLIGCLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AVALSLTVWRIHPFSTSRSTLRAVYLRLADIALDSARLLERRAARGEWATHAAKFRADAR
HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AALERSRKVLARVPASRTGGRETYDTLLGLLTDSEALFAYLIAVSGACERAPDDAWRAKR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
AVRLLTATGDVLRGIGAAVNDGQWARLTDLQLRLRRFARRLETALMEPVKLKSDFELVDF
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEC
TPVYAEAESWRASATRLFTRIWATLKANLSADSVGLRHAARVGVTTTAGFLVIRALGLPF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCH
GYWATMATLLILQPSIAATWPRSIERAAGSIVGGVLAAAIGYAIHSPLGISLAVFPLVMA
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TMALRPVSYSLFVLFLTPTFVLVADFATPGASEFAYAITRLGNNVLGCVLALLATFYLWP
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
TREKIDYRAYLGEAVRANLAYLRAALESPRRSEKEMERLRRAAGLGSNNAEEAIGRMRLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KLEDSMVDTVTLTVLSVLRRMAGTATQLRLSTNRRDMHDELGAWIATVSADIDAALNRTL
HHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RPVRHALPARDGLTSLEADAVGELALMHRLLNERMREARG
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]