| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is gbh [H]
Identifier: 91782392
GI number: 91782392
Start: 1132638
End: 1133666
Strand: Direct
Name: gbh [H]
Synonym: Bxe_A3438
Alternate gene names: 91782392
Gene position: 1132638-1133666 (Clockwise)
Preceding gene: 91782390
Following gene: 91782394
Centisome position: 23.13
GC content: 65.5
Gene sequence:
>1029_bases ATGATTTTCCGTGCTGCCTTTTTTCATTGCCGAGACACGATGAATACCTCTTCCTTCATTCACCCTGACGCTGGCGAACG GCCGCAGCCGCTGTCCGGCAACGCCATGCCCCGCTGCGGCGGCATCGCAACGATGATGCGGCTGCCGAACGTCGGCTCCG CCGAAGGGTTCGACGCCTGCTTCGTCGGTGTGCCGTTCGATCTCGGCACTTCGAACCGCACGGGCGCGCGCTTCGGGCCG CGCCAGATCCGCAGCGAGTCCGTGCTGCTGCGTCCGTACAACATGGCGACGCGCGCGGCACCGTTCGATTCGCTGCGCGT GGCCGATCTCGGCGACGTCGCGATCAACCCGTACAACCTGCACGATTCGATCGCGCGCATCGAAACCGCGTACGACGAAA TTCTCCAGCACGATTGCAAGCCGATCACGCTGGGCGGCGATCACACCATCGCGCTGCCGATCCTGCGCGCGATGCATCGC AAGCACGGCAAGGTCGGCCTGATTCACGTGGACGCGCACGCCGACGTCAACGACACGATGATGGGCGAGAAGATCGCGCA CGGCACGCCGTTCCGCCGCGCGGTGGAGGAGGGTTTGCTCGATTGCGGGCGCGTCGTGCAGATCGGTTTGCGCGGCACGG GTTACGCGGCGGAGGACTTCGACTGGTGCCGCGATCAGGGTTTCGAAGTCGTGCAGGCCGAGGCCTGCTGGAACCAGTCG CTCGCGCCGCTGATGGCGCGTGTGCGCGAGCGCATGGGCGACGGCCCCGTGTACATCACGTTCGACATCGACGGGATCGA TCCGGCTTTTGCGCCGGGAACGGGCACCCCGGAAATCGCGGGTTTGACGGTGCCGCAGGCGCTGGAAATCATTCGCGGCT CGCGTGGGCTGAATATCGTCGGCTGCGATCTGGTCGAAGTCGCGCCACCATACGATCCGTTCGGCACGACCGCGCTGCTC GGCGCGAATCTCGCGTTCGAATTGCTGTGTGTGTTGCCGGGCGTCGAGTATCGGGCGTCCACCCGCTGA
Upstream 100 bases:
>100_bases GAAGTTTGTGCCGTAGGTATTTTAAGTTCTGGGAAACTGCTCAAGAATCGAGATTCGCCCGGCAAGGTGCGGTTCAGACG CTTCTCCTCGGCCGGTCTGC
Downstream 100 bases:
>100_bases AGTGACCGCGCAAACGGAAAGGCCTGCAATTGCAGGCCTTTCCGTTTAACCGTGGAGTTAGTTCAATCAGGCATACGCCG TCTTGCGTGCCGACACGAAC
Product: agmatinase
Products: NA
Alternate protein names: GBase; D-arginase [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MIFRAAFFHCRDTMNTSSFIHPDAGERPQPLSGNAMPRCGGIATMMRLPNVGSAEGFDACFVGVPFDLGTSNRTGARFGP RQIRSESVLLRPYNMATRAAPFDSLRVADLGDVAINPYNLHDSIARIETAYDEILQHDCKPITLGGDHTIALPILRAMHR KHGKVGLIHVDAHADVNDTMMGEKIAHGTPFRRAVEEGLLDCGRVVQIGLRGTGYAAEDFDWCRDQGFEVVQAEACWNQS LAPLMARVRERMGDGPVYITFDIDGIDPAFAPGTGTPEIAGLTVPQALEIIRGSRGLNIVGCDLVEVAPPYDPFGTTALL GANLAFELLCVLPGVEYRASTR
Sequences:
>Translated_342_residues MIFRAAFFHCRDTMNTSSFIHPDAGERPQPLSGNAMPRCGGIATMMRLPNVGSAEGFDACFVGVPFDLGTSNRTGARFGP RQIRSESVLLRPYNMATRAAPFDSLRVADLGDVAINPYNLHDSIARIETAYDEILQHDCKPITLGGDHTIALPILRAMHR KHGKVGLIHVDAHADVNDTMMGEKIAHGTPFRRAVEEGLLDCGRVVQIGLRGTGYAAEDFDWCRDQGFEVVQAEACWNQS LAPLMARVRERMGDGPVYITFDIDGIDPAFAPGTGTPEIAGLTVPQALEIIRGSRGLNIVGCDLVEVAPPYDPFGTTALL GANLAFELLCVLPGVEYRASTR >Mature_342_residues MIFRAAFFHCRDTMNTSSFIHPDAGERPQPLSGNAMPRCGGIATMMRLPNVGSAEGFDACFVGVPFDLGTSNRTGARFGP RQIRSESVLLRPYNMATRAAPFDSLRVADLGDVAINPYNLHDSIARIETAYDEILQHDCKPITLGGDHTIALPILRAMHR KHGKVGLIHVDAHADVNDTMMGEKIAHGTPFRRAVEEGLLDCGRVVQIGLRGTGYAAEDFDWCRDQGFEVVQAEACWNQS LAPLMARVRERMGDGPVYITFDIDGIDPAFAPGTGTPEIAGLTVPQALEIIRGSRGLNIVGCDLVEVAPPYDPFGTTALL GANLAFELLCVLPGVEYRASTR
Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family. Agmatinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI37537722, Length=309, Percent_Identity=63.1067961165049, Blast_Score=397, Evalue=1e-111, Organism=Escherichia coli, GI1789306, Length=276, Percent_Identity=41.304347826087, Blast_Score=187, Evalue=9e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005925 - InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.7; =3.5.3.10 [H]
Molecular weight: Translated: 37079; Mature: 37079
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00147 ARGINASE_1 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRAAFFHCRDTMNTSSFIHPDAGERPQPLSGNAMPRCGGIATMMRLPNVGSAEGFDAC CCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE FVGVPFDLGTSNRTGARFGPRQIRSESVLLRPYNMATRAAPFDSLRVADLGDVAINPYNL EEECCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHCCCCCCEEEECCCCEEECCCCH HDSIARIETAYDEILQHDCKPITLGGDHTIALPILRAMHRKHGKVGLIHVDAHADVNDTM HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHH MGEKIAHGTPFRRAVEEGLLDCGRVVQIGLRGTGYAAEDFDWCRDQGFEVVQAEACWNQS HCCHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCEEEEHHHHHCCC LAPLMARVRERMGDGPVYITFDIDGIDPAFAPGTGTPEIAGLTVPQALEIIRGSRGLNIV HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE GCDLVEVAPPYDPFGTTALLGANLAFELLCVLPGVEYRASTR ECCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIFRAAFFHCRDTMNTSSFIHPDAGERPQPLSGNAMPRCGGIATMMRLPNVGSAEGFDAC CCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEE FVGVPFDLGTSNRTGARFGPRQIRSESVLLRPYNMATRAAPFDSLRVADLGDVAINPYNL EEECCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCHHHCCCCCCEEEECCCCEEECCCCH HDSIARIETAYDEILQHDCKPITLGGDHTIALPILRAMHRKHGKVGLIHVDAHADVNDTM HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHH MGEKIAHGTPFRRAVEEGLLDCGRVVQIGLRGTGYAAEDFDWCRDQGFEVVQAEACWNQS HCCHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCEEEEHHHHHCCC LAPLMARVRERMGDGPVYITFDIDGIDPAFAPGTGTPEIAGLTVPQALEIIRGSRGLNIV HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE GCDLVEVAPPYDPFGTTALLGANLAFELLCVLPGVEYRASTR ECCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA