Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 91782382

GI number: 91782382

Start: 1121014

End: 1121871

Strand: Direct

Name: ycjP [C]

Synonym: Bxe_A3449

Alternate gene names: 91782382

Gene position: 1121014-1121871 (Clockwise)

Preceding gene: 91782381

Following gene: 91782383

Centisome position: 22.9

GC content: 59.21

Gene sequence:

>858_bases
ATGCAGCCTAAGATGACGATCAGCCGTGCCGTCATTTATGCGGCCCTGTTCCTGTTCGCCCTGTATTTCCTGTTTCCGCT
GTACGTGATGCTGTCCACGTCGTTCAAGGACATCGACCAGCTGCGCACCGGCAACCTGCTCACGCCGCCCACGCACTGGA
CCGTGGATCCGTGGATCAAGGCATGGAGCGGCGCCTGTACGGGCGTGCGTTGCGACGGCATGCAGCCGTTCTTCATGAAC
TCGGTGCGGATGGTGATTCCCGCCGTGCTGATCTCGTCGATCATCGGCGCGTTCAACGGTTATGTGCTCACGCACTGGCG
TTTCCGTGGCGCCGATCCGATCTTCACGATGATCCTGGTGGGCTGCTTCATTCCGTTCCAGGCGATCCTGCTGCCGATGG
CGCGTTTCGAAGGCTTTCTCGGCCTGTCGAACACCACGACCGGCCTGGTAGTGGTGCACGTGGTCTACGGTATCGCCTTC
ACCACGATGTTCTTCCGCAACTTCTACGTGAGCATTCCGGCTGAACTCGTGAAGGCGGCGCGTATCGACGGTGCGGGGTT
TTTCACGATCTTCACGAAGATTCTGCTGCCGGTTTCGTTGCCGATTTTCATGGTGTGCCTGATCTGGCAATTCACGCAGA
TCTGGAATGACTTCCTGTTCGGTATCGTGTTCTCCGGTGTCGATTCGATGCCGATCACGGTGGCGCTGAACAACCTCGTG
AATACCTCGACCGGCGTGAAGGAATACAACGTGGACATGGCCGGCGCGATCATCGCCGCATTGCCCACGCTGCTGGTCTA
CATCATCGCCGGACGCTATTTCGTGCGCGGCCTGACGGCAGGCGCGGTGAAGGGCTGA

Upstream 100 bases:

>100_bases
GGGCAGCTGGGCGTCGGCGCGGCATCGTCGATGATGATGCTCGCCACCGTCGTAGCCGTGCTCGTGCCGCTGATGTATCT
GGAATCGAGGAGCACCCGCA

Downstream 100 bases:

>100_bases
ACGCCGGGCTGAGTCCAGGCTAACACCAGGTTAAACCATCCGGGCGCGGCGGCTTCTGTTCGATTCGAAGCCGTCGTCAC
CCGACAAAGTTTTCAAGCAG

Product: ABC sugar transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQPKMTISRAVIYAALFLFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPTHWTVDPWIKAWSGACTGVRCDGMQPFFMN
SVRMVIPAVLISSIIGAFNGYVLTHWRFRGADPIFTMILVGCFIPFQAILLPMARFEGFLGLSNTTTGLVVVHVVYGIAF
TTMFFRNFYVSIPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYIIAGRYFVRGLTAGAVKG

Sequences:

>Translated_285_residues
MQPKMTISRAVIYAALFLFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPTHWTVDPWIKAWSGACTGVRCDGMQPFFMN
SVRMVIPAVLISSIIGAFNGYVLTHWRFRGADPIFTMILVGCFIPFQAILLPMARFEGFLGLSNTTTGLVVVHVVYGIAF
TTMFFRNFYVSIPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYIIAGRYFVRGLTAGAVKG
>Mature_285_residues
MQPKMTISRAVIYAALFLFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPTHWTVDPWIKAWSGACTGVRCDGMQPFFMN
SVRMVIPAVLISSIIGAFNGYVLTHWRFRGADPIFTMILVGCFIPFQAILLPMARFEGFLGLSNTTTGLVVVHVVYGIAF
TTMFFRNFYVSIPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYIIAGRYFVRGLTAGAVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=291, Percent_Identity=28.1786941580756, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1789860, Length=257, Percent_Identity=25.2918287937743, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790464, Length=303, Percent_Identity=27.3927392739274, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31599; Mature: 31599

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPKMTISRAVIYAALFLFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPTHWTVDPWIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHH
AWSGACTGVRCDGMQPFFMNSVRMVIPAVLISSIIGAFNGYVLTHWRFRGADPIFTMILV
HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHH
GCFIPFQAILLPMARFEGFLGLSNTTTGLVVVHVVYGIAFTTMFFRNFYVSIPAELVKAA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NTSTGVKEYNVDMAGAIIAALPTLLVYIIAGRYFVRGLTAGAVKG
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQPKMTISRAVIYAALFLFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPTHWTVDPWIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHH
AWSGACTGVRCDGMQPFFMNSVRMVIPAVLISSIIGAFNGYVLTHWRFRGADPIFTMILV
HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHH
GCFIPFQAILLPMARFEGFLGLSNTTTGLVVVHVVYGIAFTTMFFRNFYVSIPAELVKAA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NTSTGVKEYNVDMAGAIIAALPTLLVYIIAGRYFVRGLTAGAVKG
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]