| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782380
Identifier: 91782380
GI number: 91782380
Start: 1118637
End: 1119884
Strand: Direct
Name: 91782380
Synonym: Bxe_A3451
Alternate gene names: NA
Gene position: 1118637-1119884 (Clockwise)
Preceding gene: 91782376
Following gene: 91782381
Centisome position: 22.85
GC content: 63.54
Gene sequence:
>1248_bases ATGAAATTTCGCGCGATCATGGGCGCTTTGTGCGCCGCAGGTCTGATGTGTGGCGTCTCGGCGGTGCAGGCTGCCGAGTC GATCGAAGTGTTGCACTGGTGGACCTCGGGCGGCGAATCGAAAGCCGTCGGCGTCCTCAAGGACGACATGACGAAGCAGG GTTACACGTGGAAGGACTTCGCGGTTGCGGGTGGCGCCGGCGCGGCTGCCATGACGGCACTCAAGACGCAGGTGATCTCG GGCAACGCGCCGAGCGCCGCGCAGATCAAGGGTCCGCTGATCCAGGACTGGGCGCAGCAAGGCGTGCTCGTGCCGATCGA CTCCGTTGCTGGCGACTGGAAGAAGAACCTGCCGCCGGAAATCGACAAGATCATCCGTGCGGACGGTCACTACGTCGCCG CACCGTTCTCGGTGCACCGCGTGAACTGGCTGTACATCAACAAGGCGGCGCTGGACAAGGCGGGCGGCAAGGCGCCGACC ACGTGGCCTGAATTCTTCGCGGTGGCCGACAAGATGAAGGCCGCGGGCATCCAGCCGATCGCGATGGGCGGCCAGCCGTG GCAGGACCTGACGCTGTGGGAAGACGTCGTGCTGTCGCAAGGCGCGGACTTCTACAAGAAGGCGCTGGTGGACCTCGACG AAAAGACGCTGACCTCGGACAAGATGGTCGGCGTGTTCGACACGGTCCGCAAGATTCAGGGTTACTTCGACGCGGGCCGC ACGGGCCGCGACTGGAACCTGGCAACGGCAATGGTCATCAATGGCAAGGCCGGCATGCAGTTCATGGGCGACTGGGCGAA GGGCGAATTCGCCAACGCCGGCAAGAAGTCGGGCTCGGACTACATCTGTGCCGCGGTGCCGGGCACGGAGAAGTCGTACA CGTTCAACGTCGACTCGTTCGTGTTCTTCCAGCAGAAGGGTGCGAAGGCGGCCACGCCGGGTCAGCTCGCGCTGGCCAGG ACCATCATGTCGCCTGACTTCCAGGAACAGTTCAGCCTGAACAAGGGTTCCATCCCGGTTCGTCTGGGCGTGTCGATGGC CAAGTTCGACGACTGCGCGAAGAAGTCGTACGCGGATGAACAGGTGGCGATCAAGTCGGGCGGCTACGTGCCTTCGCTGG CACACGGCATGGCGCAACCGGATGCAGCAGCCGGCGCGATCTCCGACGTGGTCACGAAGTTCATGAACTCGCAGCAGGAT TCGAAGAGCGCGGTTGCCGCGCTCGCGAAGGCAGCGAAGACCAAATAA
Upstream 100 bases:
>100_bases GCTCGATCGCCCAGTGTTTTGCCTGTTTGAACCAACCACAGCACCCTGGCGACATCAGGGGCCATTTGTTTTTTGTTCAG GTGTCTGGAGGAGATAAGCA
Downstream 100 bases:
>100_bases GTCGCGTCAAGCGAAGCGGCGCGCCCGGCGGTTCAGCAACGGGCGCCGGGTGCGCCCTTCGTGTCGCCGGTTGCCGGGGT TGTCTTCCTTGCGTCGGCAG
Product: ABC sugar (maltose) transporter, periplasmic ligand binding protein
Products: NA
Alternate protein names: Immunogenic 39 kDa protein; P39 [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKFRAIMGALCAAGLMCGVSAVQAAESIEVLHWWTSGGESKAVGVLKDDMTKQGYTWKDFAVAGGAGAAAMTALKTQVIS GNAPSAAQIKGPLIQDWAQQGVLVPIDSVAGDWKKNLPPEIDKIIRADGHYVAAPFSVHRVNWLYINKAALDKAGGKAPT TWPEFFAVADKMKAAGIQPIAMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDEKTLTSDKMVGVFDTVRKIQGYFDAGR TGRDWNLATAMVINGKAGMQFMGDWAKGEFANAGKKSGSDYICAAVPGTEKSYTFNVDSFVFFQQKGAKAATPGQLALAR TIMSPDFQEQFSLNKGSIPVRLGVSMAKFDDCAKKSYADEQVAIKSGGYVPSLAHGMAQPDAAAGAISDVVTKFMNSQQD SKSAVAALAKAAKTK
Sequences:
>Translated_415_residues MKFRAIMGALCAAGLMCGVSAVQAAESIEVLHWWTSGGESKAVGVLKDDMTKQGYTWKDFAVAGGAGAAAMTALKTQVIS GNAPSAAQIKGPLIQDWAQQGVLVPIDSVAGDWKKNLPPEIDKIIRADGHYVAAPFSVHRVNWLYINKAALDKAGGKAPT TWPEFFAVADKMKAAGIQPIAMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDEKTLTSDKMVGVFDTVRKIQGYFDAGR TGRDWNLATAMVINGKAGMQFMGDWAKGEFANAGKKSGSDYICAAVPGTEKSYTFNVDSFVFFQQKGAKAATPGQLALAR TIMSPDFQEQFSLNKGSIPVRLGVSMAKFDDCAKKSYADEQVAIKSGGYVPSLAHGMAQPDAAAGAISDVVTKFMNSQQD SKSAVAALAKAAKTK >Mature_415_residues MKFRAIMGALCAAGLMCGVSAVQAAESIEVLHWWTSGGESKAVGVLKDDMTKQGYTWKDFAVAGGAGAAAMTALKTQVIS GNAPSAAQIKGPLIQDWAQQGVLVPIDSVAGDWKKNLPPEIDKIIRADGHYVAAPFSVHRVNWLYINKAALDKAGGKAPT TWPEFFAVADKMKAAGIQPIAMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDEKTLTSDKMVGVFDTVRKIQGYFDAGR TGRDWNLATAMVINGKAGMQFMGDWAKGEFANAGKKSGSDYICAAVPGTEKSYTFNVDSFVFFQQKGAKAATPGQLALAR TIMSPDFQEQFSLNKGSIPVRLGVSMAKFDDCAKKSYADEQVAIKSGGYVPSLAHGMAQPDAAAGAISDVVTKFMNSQQD SKSAVAALAKAAKTK
Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 44132; Mature: 44132
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRAIMGALCAAGLMCGVSAVQAAESIEVLHWWTSGGESKAVGVLKDDMTKQGYTWKDF CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEHHHHHCCCCCCCHHE AVAGGAGAAAMTALKTQVISGNAPSAAQIKGPLIQDWAQQGVLVPIDSVAGDWKKNLPPE EEECCCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCEEEEEHHHCCCHHHCCCHH IDKIIRADGHYVAAPFSVHRVNWLYINKAALDKAGGKAPTTWPEFFAVADKMKAAGIQPI HHHHHHCCCCEEECCCEEEEEEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEE AMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDEKTLTSDKMVGVFDTVRKIQGYFDAGR ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCC TGRDWNLATAMVINGKAGMQFMGDWAKGEFANAGKKSGSDYICAAVPGTEKSYTFNVDSF CCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCEE VFFQQKGAKAATPGQLALARTIMSPDFQEQFSLNKGSIPVRLGVSMAKFDDCAKKSYADE EEEECCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCC QVAIKSGGYVPSLAHGMAQPDAAAGAISDVVTKFMNSQQDSKSAVAALAKAAKTK EEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKFRAIMGALCAAGLMCGVSAVQAAESIEVLHWWTSGGESKAVGVLKDDMTKQGYTWKDF CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEHHHHHCCCCCCCHHE AVAGGAGAAAMTALKTQVISGNAPSAAQIKGPLIQDWAQQGVLVPIDSVAGDWKKNLPPE EEECCCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCEEEEEHHHCCCHHHCCCHH IDKIIRADGHYVAAPFSVHRVNWLYINKAALDKAGGKAPTTWPEFFAVADKMKAAGIQPI HHHHHHCCCCEEECCCEEEEEEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEE AMGGQPWQDLTLWEDVVLSQGADFYKKALVDLDEKTLTSDKMVGVFDTVRKIQGYFDAGR ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCC TGRDWNLATAMVINGKAGMQFMGDWAKGEFANAGKKSGSDYICAAVPGTEKSYTFNVDSF CCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCEE VFFQQKGAKAATPGQLALARTIMSPDFQEQFSLNKGSIPVRLGVSMAKFDDCAKKSYADE EEEECCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCC QVAIKSGGYVPSLAHGMAQPDAAAGAISDVVTKFMNSQQDSKSAVAALAKAAKTK EEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9009303; 10235622 [H]