| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is argE [H]
Identifier: 91782368
GI number: 91782368
Start: 1104948
End: 1106114
Strand: Direct
Name: argE [H]
Synonym: Bxe_A3463
Alternate gene names: 91782368
Gene position: 1104948-1106114 (Clockwise)
Preceding gene: 91782367
Following gene: 91782370
Centisome position: 22.57
GC content: 63.84
Gene sequence:
>1167_bases ATGAGTGACCGATCCAGCCAGGCGCTGCTGGAACAACTGATCGGCTTCGCCACGGTCAGCCGCGAGTCCAATCTGGACAT GATCGGATTCATTCGGGATTACCTCGGGGAACTCGGAGTCGGGAGCGAGCTGTTCTACAACGCCGGGCGTACCAAGGCGA ATCTGTTCGCGACCATCGGTCCGCGTGAGCGCGGCGGTATCGTGCTGTCCGGTCACACCGACGTGGTGCCGGTCGACGGC CAGGCGTGGACCGTCGACGCCTTCCGCCTTACCGAACGCGACGGGCGGCTCTATGGCCGCGGCACGGCCGACATGAAGGG CTTCATCGCTTCGGTGCTGGCGGCAGTGCCTGTGTTTCTTGAGCGCGAACTGAAGCTGCCGGTCCATCTCGCCTTTTCGT ACGACGAGGAAGTGGGATGCCTCGGCGTGCGGCCCATGCTGGCGGAACTGGAGCGGCGCCCGCATAAGCCGGCTCTGTGC CTGATCGGCGAGCCGACCGAACTCAAGCCGGTGCTGGGTCACAAGGGCAAGCTGGCGATGCGTTGTCACGTGAAAGGTGC GGCTTGCCATTCGGCTTACGCGCCGTACGGCGTCAATGCCATTCAATACGCGGCGCGAATGATCGGCCATCTGGAAGAGA TTGGCGAGCAACTGGCGCGGCCCGAGCATCACGACGAGCGATTCGATCCGCCGTTCTCCACCGTGCAGACGGGTGTGATC AAAGGCGGCCACGCGCTCAACATCGTGCCCGCCGAATGTGAATTCGACTTCGAAGTGCGGGCGCTGCCCGGCTTTGACGC CCACCAGGTAGCCGACGAGTTGCAGACCTACGCCGAAGCCGAATTGCTGCCGAAGATGCGCGCCGTGAAGTCCGACACCG ACATCCGTTTTCAGTCGCTCTCCGCCTACCCGGGATTGGCTACTTCGCCCGATAGCGAAGCGGCGCGTCTCGTGGCGCTG CTCAGCGGTTCCACCGAGTTCGGCACGGTTGCGTTCGGCACCGAGGGCGGCCTCTTCGATCAGGCTGGCATTCCCACGGT GGTTTGCGGACCGGGCAGCATGGACCAGGGGCATAAGCCGGACGAGTTCGTCAGCGTCGAGCAATTGCGCCAGTGCGATG CGATGCTGATTCGTCTGGCGGACCATCTGTCGGCCAATCTCGCCTGA
Upstream 100 bases:
>100_bases CAGCTCGACCGTCTATGGCACGCATATCGGCCGCAGATGCAGGATTACGTGACCCGGGCGCTGAATCCGACTGCCGCGCC CAGCTACGGAGTGCCAGGCG
Downstream 100 bases:
>100_bases GGTTCCGCGCGGGACGGGCGGGACATCTGAACCGAAAGATGCGTTACGACGCTGCCTGCCCGCGGAGCATGGACGCTCCC GGCGCACAGAGGTCCGATCA
Product: acetylornithine deacetylase
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSDRSSQALLEQLIGFATVSRESNLDMIGFIRDYLGELGVGSELFYNAGRTKANLFATIGPRERGGIVLSGHTDVVPVDG QAWTVDAFRLTERDGRLYGRGTADMKGFIASVLAAVPVFLERELKLPVHLAFSYDEEVGCLGVRPMLAELERRPHKPALC LIGEPTELKPVLGHKGKLAMRCHVKGAACHSAYAPYGVNAIQYAARMIGHLEEIGEQLARPEHHDERFDPPFSTVQTGVI KGGHALNIVPAECEFDFEVRALPGFDAHQVADELQTYAEAELLPKMRAVKSDTDIRFQSLSAYPGLATSPDSEAARLVAL LSGSTEFGTVAFGTEGGLFDQAGIPTVVCGPGSMDQGHKPDEFVSVEQLRQCDAMLIRLADHLSANLA
Sequences:
>Translated_388_residues MSDRSSQALLEQLIGFATVSRESNLDMIGFIRDYLGELGVGSELFYNAGRTKANLFATIGPRERGGIVLSGHTDVVPVDG QAWTVDAFRLTERDGRLYGRGTADMKGFIASVLAAVPVFLERELKLPVHLAFSYDEEVGCLGVRPMLAELERRPHKPALC LIGEPTELKPVLGHKGKLAMRCHVKGAACHSAYAPYGVNAIQYAARMIGHLEEIGEQLARPEHHDERFDPPFSTVQTGVI KGGHALNIVPAECEFDFEVRALPGFDAHQVADELQTYAEAELLPKMRAVKSDTDIRFQSLSAYPGLATSPDSEAARLVAL LSGSTEFGTVAFGTEGGLFDQAGIPTVVCGPGSMDQGHKPDEFVSVEQLRQCDAMLIRLADHLSANLA >Mature_387_residues SDRSSQALLEQLIGFATVSRESNLDMIGFIRDYLGELGVGSELFYNAGRTKANLFATIGPRERGGIVLSGHTDVVPVDGQ AWTVDAFRLTERDGRLYGRGTADMKGFIASVLAAVPVFLERELKLPVHLAFSYDEEVGCLGVRPMLAELERRPHKPALCL IGEPTELKPVLGHKGKLAMRCHVKGAACHSAYAPYGVNAIQYAARMIGHLEEIGEQLARPEHHDERFDPPFSTVQTGVIK GGHALNIVPAECEFDFEVRALPGFDAHQVADELQTYAEAELLPKMRAVKSDTDIRFQSLSAYPGLATSPDSEAARLVALL SGSTEFGTVAFGTEGGLFDQAGIPTVVCGPGSMDQGHKPDEFVSVEQLRQCDAMLIRLADHLSANLA
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=364, Percent_Identity=35.4395604395604, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI1788816, Length=217, Percent_Identity=31.3364055299539, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1789236, Length=335, Percent_Identity=24.1791044776119, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17551016, Length=349, Percent_Identity=27.2206303724928, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 42016; Mature: 41885
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00759 ARGE_DAPE_CPG2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRSSQALLEQLIGFATVSRESNLDMIGFIRDYLGELGVGSELFYNAGRTKANLFATIG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEC PRERGGIVLSGHTDVVPVDGQAWTVDAFRLTERDGRLYGRGTADMKGFIASVLAAVPVFL CCCCCCEEEECCCCEEECCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHH ERELKLPVHLAFSYDEEVGCLGVRPMLAELERRPHKPALCLIGEPTELKPVLGHKGKLAM HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCEEE RCHVKGAACHSAYAPYGVNAIQYAARMIGHLEEIGEQLARPEHHDERFDPPFSTVQTGVI EEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC KGGHALNIVPAECEFDFEVRALPGFDAHQVADELQTYAEAELLPKMRAVKSDTDIRFQSL CCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC SAYPGLATSPDSEAARLVALLSGSTEFGTVAFGTEGGLFDQAGIPTVVCGPGSMDQGHKP CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC DEFVSVEQLRQCDAMLIRLADHLSANLA HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDRSSQALLEQLIGFATVSRESNLDMIGFIRDYLGELGVGSELFYNAGRTKANLFATIG CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEC PRERGGIVLSGHTDVVPVDGQAWTVDAFRLTERDGRLYGRGTADMKGFIASVLAAVPVFL CCCCCCEEEECCCCEEECCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHH ERELKLPVHLAFSYDEEVGCLGVRPMLAELERRPHKPALCLIGEPTELKPVLGHKGKLAM HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCEEE RCHVKGAACHSAYAPYGVNAIQYAARMIGHLEEIGEQLARPEHHDERFDPPFSTVQTGVI EEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC KGGHALNIVPAECEFDFEVRALPGFDAHQVADELQTYAEAELLPKMRAVKSDTDIRFQSL CCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC SAYPGLATSPDSEAARLVALLSGSTEFGTVAFGTEGGLFDQAGIPTVVCGPGSMDQGHKP CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC DEFVSVEQLRQCDAMLIRLADHLSANLA HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9829957 [H]