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The map label for this gene is sodC2 [H]

Identifier: 91782352

GI number: 91782352

Start: 1087901

End: 1088434

Strand: Direct

Name: sodC2 [H]

Synonym: Bxe_A3479

Alternate gene names: 91782352

Gene position: 1087901-1088434 (Clockwise)

Preceding gene: 91782350

Following gene: 91782353

Centisome position: 22.22

GC content: 66.85

Gene sequence:

>534_bases
ATGGGAAAACGAATCGACGGGCAGGCGGTGCATGCGTTCATCGTCCTGGCTGCCACCAGTGTGCTGTTATGCGGCTGTAG
CGCGTTCCTGAGACCACAGGAAAAACGCGCCGACGCTCAGTTGCTGCCCACCGTGGGCAATCAGGCGCGCGGCCTCGTCA
CGTTCATCGAGCGCTCGGACGGCGTGCAGGTCACCTACAATCTTGCGGGCATGCCGCCCAATAGCGACCACGCGCTGCAA
GTGCACGAGCGCGGCGACTGCAACGCCGCCGACGGCTCCAGCGCCGGCCAGGTGTTCTCGCCGGCCGCCGAGCGCCTGAA
AACCGGCGCGCGGGTCGAAGGCGATCTCGGCAACATTCACGCGGACGCGAACGGCGTGGCCACGGGCTTCATCGTCGCGC
CGGACGTTTCCCTCGACGGCATCCGCTCGGTATTGCAGCGCGCGGTGCTGCTGCATCACGACGCGACCGATCCATACGCC
TATCCGCAGCATGGCGCGGGCCCCGCGCTCGCATGCGGATTGATCCGCCAATGA

Upstream 100 bases:

>100_bases
TCAACGCGTCTTTTTGCGCCTGGTCTCGCGGTATCATGTCGACTTCACAAGTTCGGCTCGGCGGCCGCAGGGGCGGCCAC
CAGGCCGGCAAGAGGATCGC

Downstream 100 bases:

>100_bases
GCGGCGCGCGCACCGCGTGTTCGTGGGCGCAGCAGCTCGCCGGCATTCGGCCAGGCGGCGTTCAGCAAGAGGCGGGTCAC
AAGACCGTTCTCAACCCTAC

Product: putative copper/zinc superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MGKRIDGQAVHAFIVLAATSVLLCGCSAFLRPQEKRADAQLLPTVGNQARGLVTFIERSDGVQVTYNLAGMPPNSDHALQ
VHERGDCNAADGSSAGQVFSPAAERLKTGARVEGDLGNIHADANGVATGFIVAPDVSLDGIRSVLQRAVLLHHDATDPYA
YPQHGAGPALACGLIRQ

Sequences:

>Translated_177_residues
MGKRIDGQAVHAFIVLAATSVLLCGCSAFLRPQEKRADAQLLPTVGNQARGLVTFIERSDGVQVTYNLAGMPPNSDHALQ
VHERGDCNAADGSSAGQVFSPAAERLKTGARVEGDLGNIHADANGVATGFIVAPDVSLDGIRSVLQRAVLLHHDATDPYA
YPQHGAGPALACGLIRQ
>Mature_176_residues
GKRIDGQAVHAFIVLAATSVLLCGCSAFLRPQEKRADAQLLPTVGNQARGLVTFIERSDGVQVTYNLAGMPPNSDHALQV
HERGDCNAADGSSAGQVFSPAAERLKTGARVEGDLGNIHADANGVATGFIVAPDVSLDGIRSVLQRAVLLHHDATDPYAY
PQHGAGPALACGLIRQ

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18474; Mature: 18343

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRIDGQAVHAFIVLAATSVLLCGCSAFLRPQEKRADAQLLPTVGNQARGLVTFIERSD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEECCCCCCCCCCEEEEEECCC
GVQVTYNLAGMPPNSDHALQVHERGDCNAADGSSAGQVFSPAAERLKTGARVEGDLGNIH
CEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCEE
ADANGVATGFIVAPDVSLDGIRSVLQRAVLLHHDATDPYAYPQHGAGPALACGLIRQ
ECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
GKRIDGQAVHAFIVLAATSVLLCGCSAFLRPQEKRADAQLLPTVGNQARGLVTFIERSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEECCCCCCCCCCEEEEEECCC
GVQVTYNLAGMPPNSDHALQVHERGDCNAADGSSAGQVFSPAAERLKTGARVEGDLGNIH
CEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCEE
ADANGVATGFIVAPDVSLDGIRSVLQRAVLLHHDATDPYAYPQHGAGPALACGLIRQ
ECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]