| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782351
Identifier: 91782351
GI number: 91782351
Start: 1086177
End: 1087439
Strand: Reverse
Name: 91782351
Synonym: Bxe_A3480
Alternate gene names: NA
Gene position: 1087439-1086177 (Counterclockwise)
Preceding gene: 91782356
Following gene: 91782349
Centisome position: 22.21
GC content: 62.15
Gene sequence:
>1263_bases ATGCCGAGACTTGCCACCGATGTTGCAGGCCAAACCGTTCAACCTGCAAAGCCTTCGATGCAAGAAAACCAACAACATAG CTCTGTCGATGTATTCGTCGGCGTCGATGTCGGCAAAGGCCATCATCACGCCGTCGCCCTCGATCGGACCGGAAAGCGCC TTTACAACAAGGCGCTGCCCAACGATGAGGCCAAGCTGCGCGCCCTCATCACCGAACTCAAGACGCACGGCCAACTCCTG TTCGTCGTCGATCAGCCCGCCACCATCGGCGCGTTGCCCGTGGCAGTCGCCCGTGATGAAGGTGTTCTGGTCGCATATCT ACCGGGTCTGGCTATGCGCCGCATCGCTGACCTGCACGCTGGTGAAGCCAAGACCGATGCCCGCGATGCCGCCATCATTG CTGAAGCCGCTCGCTCAATGCCGCATACGCTGCGGTCACTTCGACTGGCTGACGAACCACTCGCCGAACTCACCATGCTG TGCGGCTTCGACGACGATCTCGCCGCACAGATCACGCAGACCAGCAACCGCATTCGCGGCCTGCTTACCCAGATTCATCC CGCGCTGGAACGGGTTCTGGGGCCGCGCCTCGACCACCCGGCCGTGCTCGATCTGCTTGAGCGGTACCCGTCGCCCGCCG AGCTTGCCGCGACCAGCGAGAAAACACTCGCCAACCGCCTCACCAAACTTGCACCTCGCATGGGCAAAAGCCTTGCTACC GAAATCGTTCAGGCGCTCAGCGAACAGGCTGTGATCGTACCCGGTACGCAGGCAGCAACCATCGTCATGCCGCGTCTGGC CCAACAACTCGCGTCTTTGCGCAAACAACGCGACGAGGTTGCCAGCGAAGTTGAACGCCTAGTGCACGCACACCCTCTTT GGCCGGTCCTGACCAGCATGCCGGGAGTCGGCGTCAGGACCGCCGCCAGACTCCTCACTGAAGTCGCTCACAAAGCCTTT GCTTCAGCCGCCCATCTTGCCGCCTATGCCGGCCTCGCCCCGGTCACACGACGCTCGGGTTCGTCCATCCGGGGCGAACA TCCATCCAGGCGGGGCAACAAGGTGCTCAAGAGAGCGCTCTTCCTCTCTGCCTTTGCCGCGTTGCGGGACCCGGTCTCAA GGGACTACTACGCTCGCAAGGTCCAGCAGGGCAAGCGCCACAATCAGGCGCTCATTGCTCTTGCCAGACGACGCTGCGAC GTGCTGTTCGCGATGCTCCGCGACGGCGCCTTCTATCAACCGAAATCCGCCCCTAACGCTTGA
Upstream 100 bases:
>100_bases GCAGTCATGATCCGGGGGGTGTTGTCACCGGGCCTGGTGGGTGGCTGGTGATCGCTAATAGGGGCTCGGCCAGGATATCT TGAGGCCGTCCGTAACGTGG
Downstream 100 bases:
>100_bases CGAACCACATAGGGGCACCCCCCGAGGGGGGCGAGAAAACTTGGGGCGGCCCGGCGTTTTCTCAGGTGTTCTGCACGACG ATGTTCGGAAACTTCGACGT
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MPRLATDVAGQTVQPAKPSMQENQQHSSVDVFVGVDVGKGHHHAVALDRTGKRLYNKALPNDEAKLRALITELKTHGQLL FVVDQPATIGALPVAVARDEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEPLAELTML CGFDDDLAAQITQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPAELAATSEKTLANRLTKLAPRMGKSLAT EIVQALSEQAVIVPGTQAATIVMPRLAQQLASLRKQRDEVASEVERLVHAHPLWPVLTSMPGVGVRTAARLLTEVAHKAF ASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRDYYARKVQQGKRHNQALIALARRRCD VLFAMLRDGAFYQPKSAPNA
Sequences:
>Translated_420_residues MPRLATDVAGQTVQPAKPSMQENQQHSSVDVFVGVDVGKGHHHAVALDRTGKRLYNKALPNDEAKLRALITELKTHGQLL FVVDQPATIGALPVAVARDEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEPLAELTML CGFDDDLAAQITQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPAELAATSEKTLANRLTKLAPRMGKSLAT EIVQALSEQAVIVPGTQAATIVMPRLAQQLASLRKQRDEVASEVERLVHAHPLWPVLTSMPGVGVRTAARLLTEVAHKAF ASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRDYYARKVQQGKRHNQALIALARRRCD VLFAMLRDGAFYQPKSAPNA >Mature_419_residues PRLATDVAGQTVQPAKPSMQENQQHSSVDVFVGVDVGKGHHHAVALDRTGKRLYNKALPNDEAKLRALITELKTHGQLLF VVDQPATIGALPVAVARDEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEPLAELTMLC GFDDDLAAQITQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPAELAATSEKTLANRLTKLAPRMGKSLATE IVQALSEQAVIVPGTQAATIVMPRLAQQLASLRKQRDEVASEVERLVHAHPLWPVLTSMPGVGVRTAARLLTEVAHKAFA SAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRDYYARKVQQGKRHNQALIALARRRCDV LFAMLRDGAFYQPKSAPNA
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 45553; Mature: 45422
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLATDVAGQTVQPAKPSMQENQQHSSVDVFVGVDVGKGHHHAVALDRTGKRLYNKALP CCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCEEEEECHHHHHHHHHCCC NDEAKLRALITELKTHGQLLFVVDQPATIGALPVAVARDEGVLVAYLPGLAMRRIADLHA CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHC GEAKTDARDAAIIAEAARSMPHTLRSLRLADEPLAELTMLCGFDDDLAAQITQTSNRIRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH LLTQIHPALERVLGPRLDHPAVLDLLERYPSPAELAATSEKTLANRLTKLAPRMGKSLAT HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIVQALSEQAVIVPGTQAATIVMPRLAQQLASLRKQRDEVASEVERLVHAHPLWPVLTSM HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC PGVGVRTAARLLTEVAHKAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH FLSAFAALRDPVSRDYYARKVQQGKRHNQALIALARRRCDVLFAMLRDGAFYQPKSAPNA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PRLATDVAGQTVQPAKPSMQENQQHSSVDVFVGVDVGKGHHHAVALDRTGKRLYNKALP CCCHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCEEEEECHHHHHHHHHCCC NDEAKLRALITELKTHGQLLFVVDQPATIGALPVAVARDEGVLVAYLPGLAMRRIADLHA CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHC GEAKTDARDAAIIAEAARSMPHTLRSLRLADEPLAELTMLCGFDDDLAAQITQTSNRIRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH LLTQIHPALERVLGPRLDHPAVLDLLERYPSPAELAATSEKTLANRLTKLAPRMGKSLAT HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIVQALSEQAVIVPGTQAATIVMPRLAQQLASLRKQRDEVASEVERLVHAHPLWPVLTSM HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC PGVGVRTAARLLTEVAHKAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH FLSAFAALRDPVSRDYYARKVQQGKRHNQALIALARRRCDVLFAMLRDGAFYQPKSAPNA HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2821490; 12000953 [H]