Click here to switch to the map view.

The map label for this gene is cobQ [H]

Identifier: 91782339

GI number: 91782339

Start: 1069082

End: 1070596

Strand: Direct

Name: cobQ [H]

Synonym: Bxe_A3492

Alternate gene names: 91782339

Gene position: 1069082-1070596 (Clockwise)

Preceding gene: 91782334

Following gene: 91782341

Centisome position: 21.84

GC content: 68.25

Gene sequence:

>1515_bases
GTGACCACCACTTCGACCTCGCATGACGCCGTACCCGTGCCGCGCGGCACGCTGATGATCCAGGGCACCACCTCCGACGC
GGGCAAGAGTACGCTGGTCGCCGGCTTGTGCCGGCTCGCGCGCCGCGCCGGCGTGCGGGTCGCGCCGTTCAAGCCGCAGA
ACATGGCGCTCAACAGCGCGGTGACCGTGGACGGCGGCGAGATCGGCCGCGCGCAGGCTTTGCAGGCGGTGGCCGCGGGC
ATTGCCGCGCACACCGATCTGAACCCCGTGCTGCTCAAGCCGACCAGCGACCGCGGCGCGCAGGTGATCATCCACGGCAA
GGCGCGCATGAATCTCGACGCGCGTGCGTACCACGACTACAAGCCCGTCGCCCTCGAAGCCGTGCTGCAATCGTATGCGC
GTCTGCAAGCGGCGTACGACACGATTTTCGTCGAAGGCGCGGGCAGCCCCGCCGAAATCAATCTGCGCGACCGCGATATC
GCCAACATGGGTTTTGCTGAGGCCGTGGATTGCCCGGTCGTGCTGGTGGCCGACATCGACCGCGGTGGCGTGTTCGCGCA
TCTCACGGGCACGCTCGCGTGCCTGTCGCCGAGCGAGCAGGCGCGGGTGCGCGGTTTCATCATCAACCGCTTTCGCGGCG
ACCTCAGTTTGCTGCAGCCCGGTTTGGACTGGCTCGAAGCGAAAACCGGCAAGCCGGTGCTCGGCGTCGTTCCCTATCTG
CACGGCCTGACGCTCGACGCCGAAGACATGCTGCCGCCCGAATTGCGCGCGGCGCACAGCGGCGGGGCGGCGCGCATGCT
GCGGGTGGTCGTGCCGGTGCTGCCGCACATCAGCAATCACACGGACTTCGACGCGTTGCGCGCGCATCCGCAGGTGGATT
TCCACTACGTGCGCAGCGGCACACCGCCGCCGCCGGCCGATCTGATCATTCTGCCGGGCTCGAAGAACGTGCCCGGCGAC
CTGGCGTTTTTGCGCGCACAGGGCTGGGATGCGGTGCTGCAAAAGCATTTGCGCTATGGCGGCCGGGTGATCGGCATTTG
CGGCGGCATGCAGATGCTTGGGCGCGAAGTGGCCGATCCGCATGGCGTGGAGGGCGCGCCGGGTGCGTCCGCGGGACTCG
GCTGGCTCGATTACTCGACGGTGCTCACGCGCGACAAGACGCTGAAGAACGTGACCGGCCACCTCGCGTTGCCCGGTGCG
CCGGAAGTGGCCGGCTACGAGATCCATATGGGCGAGACGCGCGGGCCGGCGTTGGACACGCCCGCGCTGCAATTGGGCGA
CGCACAAGATGCCCGCCCCGACGGCGCGATTTCCGCCGATGGCCAGATTCTCGCCACCTACGTGCACGGCCTGTTCGACA
CGCCGGCCGCCTGTGCGGCGTTGCTGGCGTGGGCGGGCCTGAGCGATGCAGAGGCAATCGACTACCCGGCGTTGCGCGAG
GCGTCGCTGGAACGCCTTGCGGACACGCTCGCCGAGCACCTCGATCTGGCGAAACTCTTTGCTGCGATTGGTTGA

Upstream 100 bases:

>100_bases
GGTCGCGGGGAGTCATCGCGTGATTGTACCGGCGTGCAGTGCGGGCCGGCGCGATGGGATAATGCGGCGCTTGTCCGTTC
ACCGCCAGGCCCAGGATTCC

Downstream 100 bases:

>100_bases
TTGGGTTCCACGGGGAGGATCAGATCCAATCTTGTCGGCAAATAATCAAAGCCTGGAAGATGGTTTTTCGCTTCGCACAA
CGGCTGGGATTTCGCGTCGC

Product: cobyric acid synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MTTTSTSHDAVPVPRGTLMIQGTTSDAGKSTLVAGLCRLARRAGVRVAPFKPQNMALNSAVTVDGGEIGRAQALQAVAAG
IAAHTDLNPVLLKPTSDRGAQVIIHGKARMNLDARAYHDYKPVALEAVLQSYARLQAAYDTIFVEGAGSPAEINLRDRDI
ANMGFAEAVDCPVVLVADIDRGGVFAHLTGTLACLSPSEQARVRGFIINRFRGDLSLLQPGLDWLEAKTGKPVLGVVPYL
HGLTLDAEDMLPPELRAAHSGGAARMLRVVVPVLPHISNHTDFDALRAHPQVDFHYVRSGTPPPPADLIILPGSKNVPGD
LAFLRAQGWDAVLQKHLRYGGRVIGICGGMQMLGREVADPHGVEGAPGASAGLGWLDYSTVLTRDKTLKNVTGHLALPGA
PEVAGYEIHMGETRGPALDTPALQLGDAQDARPDGAISADGQILATYVHGLFDTPAACAALLAWAGLSDAEAIDYPALRE
ASLERLADTLAEHLDLAKLFAAIG

Sequences:

>Translated_504_residues
MTTTSTSHDAVPVPRGTLMIQGTTSDAGKSTLVAGLCRLARRAGVRVAPFKPQNMALNSAVTVDGGEIGRAQALQAVAAG
IAAHTDLNPVLLKPTSDRGAQVIIHGKARMNLDARAYHDYKPVALEAVLQSYARLQAAYDTIFVEGAGSPAEINLRDRDI
ANMGFAEAVDCPVVLVADIDRGGVFAHLTGTLACLSPSEQARVRGFIINRFRGDLSLLQPGLDWLEAKTGKPVLGVVPYL
HGLTLDAEDMLPPELRAAHSGGAARMLRVVVPVLPHISNHTDFDALRAHPQVDFHYVRSGTPPPPADLIILPGSKNVPGD
LAFLRAQGWDAVLQKHLRYGGRVIGICGGMQMLGREVADPHGVEGAPGASAGLGWLDYSTVLTRDKTLKNVTGHLALPGA
PEVAGYEIHMGETRGPALDTPALQLGDAQDARPDGAISADGQILATYVHGLFDTPAACAALLAWAGLSDAEAIDYPALRE
ASLERLADTLAEHLDLAKLFAAIG
>Mature_503_residues
TTTSTSHDAVPVPRGTLMIQGTTSDAGKSTLVAGLCRLARRAGVRVAPFKPQNMALNSAVTVDGGEIGRAQALQAVAAGI
AAHTDLNPVLLKPTSDRGAQVIIHGKARMNLDARAYHDYKPVALEAVLQSYARLQAAYDTIFVEGAGSPAEINLRDRDIA
NMGFAEAVDCPVVLVADIDRGGVFAHLTGTLACLSPSEQARVRGFIINRFRGDLSLLQPGLDWLEAKTGKPVLGVVPYLH
GLTLDAEDMLPPELRAAHSGGAARMLRVVVPVLPHISNHTDFDALRAHPQVDFHYVRSGTPPPPADLIILPGSKNVPGDL
AFLRAQGWDAVLQKHLRYGGRVIGICGGMQMLGREVADPHGVEGAPGASAGLGWLDYSTVLTRDKTLKNVTGHLALPGAP
EVAGYEIHMGETRGPALDTPALQLGDAQDARPDGAISADGQILATYVHGLFDTPAACAALLAWAGLSDAEAIDYPALREA
SLERLADTLAEHLDLAKLFAAIG

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG1492

COG function: function code H; Cobyric acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 53054; Mature: 52923

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTSTSHDAVPVPRGTLMIQGTTSDAGKSTLVAGLCRLARRAGVRVAPFKPQNMALNSA
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEECCE
VTVDGGEIGRAQALQAVAAGIAAHTDLNPVLLKPTSDRGAQVIIHGKARMNLDARAYHDY
EEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCEEECCCHHHHCCC
KPVALEAVLQSYARLQAAYDTIFVEGAGSPAEINLRDRDIANMGFAEAVDCPVVLVADID
CHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCHHHCCCHHHCCCCEEEEEECC
RGGVFAHLTGTLACLSPSEQARVRGFIINRFRGDLSLLQPGLDWLEAKTGKPVLGVVPYL
CCCEEEEECCEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCHHHHHHHH
HGLTLDAEDMLPPELRAAHSGGAARMLRVVVPVLPHISNHTDFDALRAHPQVDFHYVRSG
HCCCCCHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCC
TPPPPADLIILPGSKNVPGDLAFLRAQGWDAVLQKHLRYGGRVIGICGGMQMLGREVADP
CCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCC
HGVEGAPGASAGLGWLDYSTVLTRDKTLKNVTGHLALPGAPEVAGYEIHMGETRGPALDT
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCEECCCCCCCCCEEEEECCCCCCCCCC
PALQLGDAQDARPDGAISADGQILATYVHGLFDTPAACAALLAWAGLSDAEAIDYPALRE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHH
ASLERLADTLAEHLDLAKLFAAIG
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTTSTSHDAVPVPRGTLMIQGTTSDAGKSTLVAGLCRLARRAGVRVAPFKPQNMALNSA
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEECCE
VTVDGGEIGRAQALQAVAAGIAAHTDLNPVLLKPTSDRGAQVIIHGKARMNLDARAYHDY
EEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCEEECCCHHHHCCC
KPVALEAVLQSYARLQAAYDTIFVEGAGSPAEINLRDRDIANMGFAEAVDCPVVLVADID
CHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCHHHCCCHHHCCCCEEEEEECC
RGGVFAHLTGTLACLSPSEQARVRGFIINRFRGDLSLLQPGLDWLEAKTGKPVLGVVPYL
CCCEEEEECCEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCCCCHHHHHHHH
HGLTLDAEDMLPPELRAAHSGGAARMLRVVVPVLPHISNHTDFDALRAHPQVDFHYVRSG
HCCCCCHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCC
TPPPPADLIILPGSKNVPGDLAFLRAQGWDAVLQKHLRYGGRVIGICGGMQMLGREVADP
CCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCC
HGVEGAPGASAGLGWLDYSTVLTRDKTLKNVTGHLALPGAPEVAGYEIHMGETRGPALDT
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCEECCCCCCCCCEEEEECCCCCCCCCC
PALQLGDAQDARPDGAISADGQILATYVHGLFDTPAACAALLAWAGLSDAEAIDYPALRE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHH
ASLERLADTLAEHLDLAKLFAAIG
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA