| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782315
Identifier: 91782315
GI number: 91782315
Start: 1047582
End: 1048652
Strand: Direct
Name: 91782315
Synonym: Bxe_A3516
Alternate gene names: NA
Gene position: 1047582-1048652 (Clockwise)
Preceding gene: 91782313
Following gene: 91782316
Centisome position: 21.4
GC content: 59.85
Gene sequence:
>1071_bases ATGCGCGGGCGACCGAAGGCAGAACTTGTGTTGAGTGAACCGGAGCACGATCAACTCACGTCCCTGACGATGCGTCGCAA GACGGCTCAGGCGTTGGCACTGCGAGCGCGGATCGTGCTGGCCTGTGCCGGGGGCATCGACAACAAGACGGTCGCGGCGA AACTTCGCGTTACTGAGCAAACTGTCTCGAAGTGGCGTGCGCGCTACGTGACGCGCCGGCTCGATGGTCTGCTCGACGCA CCGCGTCCGGGTGCACCCAGATCGATCGAGGACGCGCACGTTGATGCCGTGATCGCGAAGACACTGGAGTCCCTACCTGC GGGAGCAACGCACTGGAGTACGCGCGCGATGGCTCGGGAGACGAGTCTTTCGCAGACTGCGGTGGCGCGAATCTGGCGAG CTTTCGGCCTGCAGCCGCATCGGCAGGAAACCTTCAAACTTTCGAGCGATCCGCTGTTCGTCGACAAGGTTCGCGACATC GTCGGCCTGTACCTCGATCCGCCACTCAAGGCGATGGTGCTGTGTGTTGACGAGAAGAGCCAGATCCAGGCCCTCGATCG TACGCAGCCCATATTGCCGTTGGCGCCTGGCATTCCCGAGCGCCGTACTCACGACTATATGCGCCACGGCACCACCACCT TGTTTGCTGCGTTGGACATCGCCACTGGCGAAGTCATTGGTGAATTGCACCGTCGCCATCGCAGCAGTGAATTCCTGCAG TTCCTGCGCACGATCGAGGCCTGCGTGCCCGCCGATCTGGAAGTTCATCTGGTGATGGATAACTACGGCACGCATAAGAC GCCTTCTATCAAAAACTGGTTCGCTCGACACCCACGGTTCCATGTTCACTTCACCCCAACGTCGGCATCGTGGCTCAATC AGGTGGAACGCTGGTTTGCTACGCTTACCGAAAAATACATCCGGCGTGGCACGCATCGATCGACGCGGCAGCTTGAAGAA GCGATCCGGCATTACCTCGACGTCAATAACGCGAATCCCCGACCGTTCGTCTGGAGCAAGTCAGCCGATGAAATTCTCGC GAGCCTCGAACGGTTTTGCGCACGGGTATAA
Upstream 100 bases:
>100_bases GAATTCTCTCAATGACCACTAGTATTGTGAGTTAGAAATTCATTGAATAAATTGTCGCCTATAGTAGTGTTTGGTGAAGC ACGAACACGACGAGGCGGCG
Downstream 100 bases:
>100_bases ACAGCATCGGGATAAACGCCATGAACATCAATACAGTTGCCATTGACGACGCCGTTCTCGCACTCCTGCAATTGACCTTG CATGACCACAACCGCGCCTG
Product: putative transposase
Products: NA
Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; Feruloyl Esterase; ISMsm2 Transposase; Isrso5-Transposase Protein; LuxR Family Transcriptional Regulator; ISMsm5 Transposase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Transposase; Transcriptional Regulator AraC Family; Aminoglycoside Phosphotransferase; LOW QUALITY PROTEIN ISMsm5 Transposase; GntR Family Transcriptional Regulator; ISPsy1 Transposase; Transposase-Fragment; Inactivated Transposase; Integrase Catalytic Domain-Containing Protein; Transposase Or Inactivated Derivative; Regulatory Protein LuxR; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of; ROK Family Protein; Transposase Fragment
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MRGRPKAELVLSEPEHDQLTSLTMRRKTAQALALRARIVLACAGGIDNKTVAAKLRVTEQTVSKWRARYVTRRLDGLLDA PRPGAPRSIEDAHVDAVIAKTLESLPAGATHWSTRAMARETSLSQTAVARIWRAFGLQPHRQETFKLSSDPLFVDKVRDI VGLYLDPPLKAMVLCVDEKSQIQALDRTQPILPLAPGIPERRTHDYMRHGTTTLFAALDIATGEVIGELHRRHRSSEFLQ FLRTIEACVPADLEVHLVMDNYGTHKTPSIKNWFARHPRFHVHFTPTSASWLNQVERWFATLTEKYIRRGTHRSTRQLEE AIRHYLDVNNANPRPFVWSKSADEILASLERFCARV
Sequences:
>Translated_356_residues MRGRPKAELVLSEPEHDQLTSLTMRRKTAQALALRARIVLACAGGIDNKTVAAKLRVTEQTVSKWRARYVTRRLDGLLDA PRPGAPRSIEDAHVDAVIAKTLESLPAGATHWSTRAMARETSLSQTAVARIWRAFGLQPHRQETFKLSSDPLFVDKVRDI VGLYLDPPLKAMVLCVDEKSQIQALDRTQPILPLAPGIPERRTHDYMRHGTTTLFAALDIATGEVIGELHRRHRSSEFLQ FLRTIEACVPADLEVHLVMDNYGTHKTPSIKNWFARHPRFHVHFTPTSASWLNQVERWFATLTEKYIRRGTHRSTRQLEE AIRHYLDVNNANPRPFVWSKSADEILASLERFCARV >Mature_356_residues MRGRPKAELVLSEPEHDQLTSLTMRRKTAQALALRARIVLACAGGIDNKTVAAKLRVTEQTVSKWRARYVTRRLDGLLDA PRPGAPRSIEDAHVDAVIAKTLESLPAGATHWSTRAMARETSLSQTAVARIWRAFGLQPHRQETFKLSSDPLFVDKVRDI VGLYLDPPLKAMVLCVDEKSQIQALDRTQPILPLAPGIPERRTHDYMRHGTTTLFAALDIATGEVIGELHRRHRSSEFLQ FLRTIEACVPADLEVHLVMDNYGTHKTPSIKNWFARHPRFHVHFTPTSASWLNQVERWFATLTEKYIRRGTHRSTRQLEE AIRHYLDVNNANPRPFVWSKSADEILASLERFCARV
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40465; Mature: 40465
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRPKAELVLSEPEHDQLTSLTMRRKTAQALALRARIVLACAGGIDNKTVAAKLRVTEQ CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHHHHH TVSKWRARYVTRRLDGLLDAPRPGAPRSIEDAHVDAVIAKTLESLPAGATHWSTRAMARE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TSLSQTAVARIWRAFGLQPHRQETFKLSSDPLFVDKVRDIVGLYLDPPLKAMVLCVDEKS HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHEEEEEECCHH QIQALDRTQPILPLAPGIPERRTHDYMRHGTTTLFAALDIATGEVIGELHRRHRSSEFLQ HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH FLRTIEACVPADLEVHLVMDNYGTHKTPSIKNWFARHPRFHVHFTPTSASWLNQVERWFA HHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHHH TLTEKYIRRGTHRSTRQLEEAIRHYLDVNNANPRPFVWSKSADEILASLERFCARV HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRGRPKAELVLSEPEHDQLTSLTMRRKTAQALALRARIVLACAGGIDNKTVAAKLRVTEQ CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEHHHHH TVSKWRARYVTRRLDGLLDAPRPGAPRSIEDAHVDAVIAKTLESLPAGATHWSTRAMARE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TSLSQTAVARIWRAFGLQPHRQETFKLSSDPLFVDKVRDIVGLYLDPPLKAMVLCVDEKS HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHEEEEEECCHH QIQALDRTQPILPLAPGIPERRTHDYMRHGTTTLFAALDIATGEVIGELHRRHRSSEFLQ HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH FLRTIEACVPADLEVHLVMDNYGTHKTPSIKNWFARHPRFHVHFTPTSASWLNQVERWFA HHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHHH TLTEKYIRRGTHRSTRQLEEAIRHYLDVNNANPRPFVWSKSADEILASLERFCARV HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA