| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782312
Identifier: 91782312
GI number: 91782312
Start: 1043468
End: 1043968
Strand: Direct
Name: 91782312
Synonym: Bxe_A3521
Alternate gene names: NA
Gene position: 1043468-1043968 (Clockwise)
Preceding gene: 91782311
Following gene: 91782313
Centisome position: 21.31
GC content: 57.49
Gene sequence:
>501_bases TTGAACATGACCGACCAAACTTCTACGCGGTTTCCTCCGACGAGGGACGCCCATGCCCCGGTACCATCCGGCGACAATAG TTTCGCATGGTCTGATGCGCGCCTGTTGGGCTTCGCATTGATGGACGAGGTGCACAAAGAATTCTATGCGGTTGCGCTGA ATCTGGTGACCTGCACCGACGCGACGGCTGCCACCGCGATAGACCGGTTCGAAAGACATGCGGTTAGCCATTTCGAGCAG GAGGACCAGTGGATGCGCTCGACGAACTTTCCCCCACGTGACTGCCATATTGACGAACATGCCGCCGTCTTGAAGTCGGT CAGTGAAGTCAAGGAGGCGGTCGAACAGGGGCGGGCCGGCGCCGAAATGGTTCGAGATCTTGGCATGCACCTCTTCGAGT GGTTTCCTGGACACGCGGACTATCTCGACTCTGCGCTGGCGGCATGGATGATGAAGCGGACGATGGGTGGAAAGCCTGTT GTGCTAAGACGGAAAATTTGA
Upstream 100 bases:
>100_bases GGGTTGGAGGCGAGCTAAGTTATAAGACGCAGACTCGGCATCATACGGGGGCTTTCGCCGTTACACCAAACGGGGCGCCA CATCGATACCACAGGACTGA
Downstream 100 bases:
>100_bases CTGCGCGTTGGTGCCCGGAGGAGCCGAGCAATGTTCGATTGAGCCCCCGAAATCTAATGTAGCGAGTTACTTTGAAGCTG AAAAGGAACGGCGCCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNMTDQTSTRFPPTRDAHAPVPSGDNSFAWSDARLLGFALMDEVHKEFYAVALNLVTCTDATAATAIDRFERHAVSHFEQ EDQWMRSTNFPPRDCHIDEHAAVLKSVSEVKEAVEQGRAGAEMVRDLGMHLFEWFPGHADYLDSALAAWMMKRTMGGKPV VLRRKI
Sequences:
>Translated_166_residues MNMTDQTSTRFPPTRDAHAPVPSGDNSFAWSDARLLGFALMDEVHKEFYAVALNLVTCTDATAATAIDRFERHAVSHFEQ EDQWMRSTNFPPRDCHIDEHAAVLKSVSEVKEAVEQGRAGAEMVRDLGMHLFEWFPGHADYLDSALAAWMMKRTMGGKPV VLRRKI >Mature_166_residues MNMTDQTSTRFPPTRDAHAPVPSGDNSFAWSDARLLGFALMDEVHKEFYAVALNLVTCTDATAATAIDRFERHAVSHFEQ EDQWMRSTNFPPRDCHIDEHAAVLKSVSEVKEAVEQGRAGAEMVRDLGMHLFEWFPGHADYLDSALAAWMMKRTMGGKPV VLRRKI
Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]
COG id: COG2703
COG function: function code P; Hemerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemerythrin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012827 - InterPro: IPR012312 - InterPro: IPR016131 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 18721; Mature: 18721
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMTDQTSTRFPPTRDAHAPVPSGDNSFAWSDARLLGFALMDEVHKEFYAVALNLVTCTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATAATAIDRFERHAVSHFEQEDQWMRSTNFPPRDCHIDEHAAVLKSVSEVKEAVEQGRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH AEMVRDLGMHLFEWFPGHADYLDSALAAWMMKRTMGGKPVVLRRKI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MNMTDQTSTRFPPTRDAHAPVPSGDNSFAWSDARLLGFALMDEVHKEFYAVALNLVTCTD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATAATAIDRFERHAVSHFEQEDQWMRSTNFPPRDCHIDEHAAVLKSVSEVKEAVEQGRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH AEMVRDLGMHLFEWFPGHADYLDSALAAWMMKRTMGGKPVVLRRKI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]