Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ybfB [H]

Identifier: 91782306

GI number: 91782306

Start: 1036697

End: 1037983

Strand: Direct

Name: ybfB [H]

Synonym: Bxe_A3527

Alternate gene names: 91782306

Gene position: 1036697-1037983 (Clockwise)

Preceding gene: 91782305

Following gene: 91782307

Centisome position: 21.18

GC content: 62.47

Gene sequence:

>1287_bases
ATGTTGCATCGAAAAATCAGCCGCTGGTGGACGGCCGTCGCGGGGGCGCTCGGGGCGGCCACCGGCGGCGGGGTGATCGC
GGTCTACGTGTTTGGCGTGTTTGCCAAACCGATCAGTGCGGAATTCGGCTGGTCGAGAGCGACGGTTTCGCTGGGGCTCA
CCGTGTTTTCCATCGCCAACGGACTCGGCACGGTATTTCTCGGTGTCGCGATGGACCGCTGGGGCGTCAAGCGCACGACG
ATGGCGATGATCCTGCTGTTCGGGGTGTCGCTCGCGTCGGTCTCTCTGCTGTCGCCCAATTTACCGGCTTATCTCGGCGT
CTTTGCGGTAGTCGGATTCGCAGCCGCAGCGGCGACCATCATGCCTTATGCGTTGGTCGTGTCGGTATGGTTCGACCGCA
CGCGCGGCTGGGTTCTGGGACTCATCAATGCCGGCACGGGTCTGGGCGGCGCTATCATGCCGTTCTACGCGAATTATCTG
CTGGCCCATTTCGGCTGGCGTGGCGGCTATCTGGGCGTCGGTATCGCGGTAGCGGTCGTCCCACTGCTGGCGATGGCTTT
TCTGGTCAGGCTGCCCGAGGGCTTTGAGGAGAACCGGCTGCGCGATCGTCTCGCTGCCGCGAAAACGGCCGTTCCGCTAC
ATACGATCGTGCGCACCAGCCGGCATTTCTGGCTGCTTGCGCTCGCGATTTTCGGCATCTCGTTTGCGACGTACGGCATG
CTTTCGCAACTCACGCCGATGATGCTCGACCGCGGTGTGACGCCGATCGTCGCAGCAGGCGTGATGTCTGCCGCCAGCAT
CAGCTCAATCTGCTCGCGACTCGGCGCCGGCGCTTTCCTGGATCGGTTCTTCGCGCCGTACGTTACCGCGGTGATCTTCA
TCCTCGCGGCGATCGGCATGTTGCTGGTGTCGGGCAGTCATTCGGTGCTGCTGCTGACTTGCGGCGCAGTGCTTCTCGGT
CTCGGCCTCGGCGCGGAAGGCGACCTGCTGACCTACCTAGTGAGCCGCTATTTCTCGATCTACTCGTTCGGCTCGGTCAC
CGGTGCGATCTGGCTGACGTTTGCATGGGGTGGCGCGTCGGGCATTTATCTTCTCAATCGATCGTTCGACGTGACCCATT
CGTACAAGCCGGCGGCATACAGTTTCGTCGCAATCGTCGTGCTTGCCGCGATCGCGGTTTCCCGCCTCGGCCCATATCGT
TTTCCGCCTGCGCATAAGGGTTCGCATGCAAGTTCCAGCGATAGCGAGCTAGGCGACGAGACGGCCGGCGCAGTATCCAG
GCTTTAG

Upstream 100 bases:

>100_bases
CTCGTGCCCGCGATGCCGGCGCCGGGAGTGGATCAGGCCGGCGTTATGGTCGGTATCCGTCACACCTTCTGAAAACGTGT
GTTCCTTGAGGGAGCAGGGC

Downstream 100 bases:

>100_bases
CACCGCAGCGATGGTCGTCGGACGTATTCCGAAGGCCATCGCACCGATTCAACCTCAAGACATCAAAGGAGTATTTCATG
CTTGCTGAACAGCCGGGAAA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MLHRKISRWWTAVAGALGAATGGGVIAVYVFGVFAKPISAEFGWSRATVSLGLTVFSIANGLGTVFLGVAMDRWGVKRTT
MAMILLFGVSLASVSLLSPNLPAYLGVFAVVGFAAAAATIMPYALVVSVWFDRTRGWVLGLINAGTGLGGAIMPFYANYL
LAHFGWRGGYLGVGIAVAVVPLLAMAFLVRLPEGFEENRLRDRLAAAKTAVPLHTIVRTSRHFWLLALAIFGISFATYGM
LSQLTPMMLDRGVTPIVAAGVMSAASISSICSRLGAGAFLDRFFAPYVTAVIFILAAIGMLLVSGSHSVLLLTCGAVLLG
LGLGAEGDLLTYLVSRYFSIYSFGSVTGAIWLTFAWGGASGIYLLNRSFDVTHSYKPAAYSFVAIVVLAAIAVSRLGPYR
FPPAHKGSHASSSDSELGDETAGAVSRL

Sequences:

>Translated_428_residues
MLHRKISRWWTAVAGALGAATGGGVIAVYVFGVFAKPISAEFGWSRATVSLGLTVFSIANGLGTVFLGVAMDRWGVKRTT
MAMILLFGVSLASVSLLSPNLPAYLGVFAVVGFAAAAATIMPYALVVSVWFDRTRGWVLGLINAGTGLGGAIMPFYANYL
LAHFGWRGGYLGVGIAVAVVPLLAMAFLVRLPEGFEENRLRDRLAAAKTAVPLHTIVRTSRHFWLLALAIFGISFATYGM
LSQLTPMMLDRGVTPIVAAGVMSAASISSICSRLGAGAFLDRFFAPYVTAVIFILAAIGMLLVSGSHSVLLLTCGAVLLG
LGLGAEGDLLTYLVSRYFSIYSFGSVTGAIWLTFAWGGASGIYLLNRSFDVTHSYKPAAYSFVAIVVLAAIAVSRLGPYR
FPPAHKGSHASSSDSELGDETAGAVSRL
>Mature_428_residues
MLHRKISRWWTAVAGALGAATGGGVIAVYVFGVFAKPISAEFGWSRATVSLGLTVFSIANGLGTVFLGVAMDRWGVKRTT
MAMILLFGVSLASVSLLSPNLPAYLGVFAVVGFAAAAATIMPYALVVSVWFDRTRGWVLGLINAGTGLGGAIMPFYANYL
LAHFGWRGGYLGVGIAVAVVPLLAMAFLVRLPEGFEENRLRDRLAAAKTAVPLHTIVRTSRHFWLLALAIFGISFATYGM
LSQLTPMMLDRGVTPIVAAGVMSAASISSICSRLGAGAFLDRFFAPYVTAVIFILAAIGMLLVSGSHSVLLLTCGAVLLG
LGLGAEGDLLTYLVSRYFSIYSFGSVTGAIWLTFAWGGASGIYLLNRSFDVTHSYKPAAYSFVAIVVLAAIAVSRLGPYR
FPPAHKGSHASSSDSELGDETAGAVSRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45028; Mature: 45028

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCC
>Mature Secondary Structure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HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]