Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is xylM [H]

Identifier: 91782273

GI number: 91782273

Start: 1000637

End: 1001764

Strand: Direct

Name: xylM [H]

Synonym: Bxe_A3561

Alternate gene names: 91782273

Gene position: 1000637-1001764 (Clockwise)

Preceding gene: 91782272

Following gene: 91782274

Centisome position: 20.44

GC content: 57.98

Gene sequence:

>1128_bases
ATGTGGGACTACATCAAATACTATTTTGCGCCCCTCGTACAGGCACTGGCGATCTGGGGGTTTTATAAGGGTGGCGATTT
CACGTGGATTGCGATCGGTGCGTTTCCGGCGATCGCAGTTTTCGACGCGTTGCTGCCATTCGATCTTTCCAAACGCAGGA
TGAAGAGTCACTTCTGGGCCTATTTACCCGTCTGGATTTCGGCACTTCTGTTGCCGGTCATGTATTTCGTTTTTGCGTGG
TCAGTCGGTCATCATCTGAGCGCCTGGCAGCTGGCCGGTGGTGTCGCGGGGCTCGCGTGGCTGTCGGTGGTGCCGGGTGT
TCCGGCGACCCACGAACTGTATCACTCGCGTGGGCGCCTGGCGCGATTTGCCGGACGCTACGGGCAGATTGCATTTCTCG
ACACCATGCGAATGGAAGTCCATGTGGTGGGTCACCACCGGGATGTCGGCACTGCCGAGGATTGTGACACCGCGCGCCGC
GGTACAAACCTGTACAGCTTCGTCGCGCGGTCCATGCTCGAGTCGACGAGGCTCGAATTGAAGCTGGATTCCGATACGTT
GCAAAAGCGGGGGTACTCGCGCTGGTCGATCCGGCATTCGCTCTGGCGAGCTATTCTGGCCGTCGTCGTGTTCCTTGGAA
TCATCTACGCAATCGGTGGCATCAAGGCAGCGGGATTGTGCCTGATCGCGATGGTGATCGCGCGGTTCTGGGTTGAGGCA
TTCAACTATTACCAGCACTTTGGACAGGTTCGGGTAGTCGGCACACCCATCGAGAAGCGGCATGTCTGGAATCACTACGG
CACGCTCTCCCGCCTCTATGCGTTCGAAATTACCAATCACGCTGACCATCATCTCAATTCCTATATTCCGTACTACAAGC
TGGTACCGGACAGGCAGGCGATCATCATGCCCAGCATCATCGTCTGCTTCCTTTCGGGCTTCGTTCCCTCGCTGTGGTAC
GGCCGGATCATCAAACCCGCCTTGCGCCGTTGGGATAACGAATATGCCTCGCAAGCGGAGCGACGTCTGGCCATGGAGCA
AAACCGGAGTGCGGGTTGGGATGACTGGTTCGAAGAGCCGCCGAGCAAACCCGGCAAGCCGAGCACGACAGCCTGGGCCG
GAAGCTGA

Upstream 100 bases:

>100_bases
TTGCCGCATACACCGAAATCAAGACGGTCTGTGCGTTGCTGGATGACTGACGGCATGTGAGCCAGAAGCACCCGTATTCA
GAAGGATGAGGAGACTGATC

Downstream 100 bases:

>100_bases
CCGCGTACTGAAGGGAGACCTCTGTGACTACAAACGCAAGCGTCATGCGGAGCGAGATGCGCGAGATCCAGCGTCACATG
ATCGGGCACGGCATGCTGAT

Product: p-cymene monooxygenase, hydroxylase subunit(CymAa)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MWDYIKYYFAPLVQALAIWGFYKGGDFTWIAIGAFPAIAVFDALLPFDLSKRRMKSHFWAYLPVWISALLLPVMYFVFAW
SVGHHLSAWQLAGGVAGLAWLSVVPGVPATHELYHSRGRLARFAGRYGQIAFLDTMRMEVHVVGHHRDVGTAEDCDTARR
GTNLYSFVARSMLESTRLELKLDSDTLQKRGYSRWSIRHSLWRAILAVVVFLGIIYAIGGIKAAGLCLIAMVIARFWVEA
FNYYQHFGQVRVVGTPIEKRHVWNHYGTLSRLYAFEITNHADHHLNSYIPYYKLVPDRQAIIMPSIIVCFLSGFVPSLWY
GRIIKPALRRWDNEYASQAERRLAMEQNRSAGWDDWFEEPPSKPGKPSTTAWAGS

Sequences:

>Translated_375_residues
MWDYIKYYFAPLVQALAIWGFYKGGDFTWIAIGAFPAIAVFDALLPFDLSKRRMKSHFWAYLPVWISALLLPVMYFVFAW
SVGHHLSAWQLAGGVAGLAWLSVVPGVPATHELYHSRGRLARFAGRYGQIAFLDTMRMEVHVVGHHRDVGTAEDCDTARR
GTNLYSFVARSMLESTRLELKLDSDTLQKRGYSRWSIRHSLWRAILAVVVFLGIIYAIGGIKAAGLCLIAMVIARFWVEA
FNYYQHFGQVRVVGTPIEKRHVWNHYGTLSRLYAFEITNHADHHLNSYIPYYKLVPDRQAIIMPSIIVCFLSGFVPSLWY
GRIIKPALRRWDNEYASQAERRLAMEQNRSAGWDDWFEEPPSKPGKPSTTAWAGS
>Mature_375_residues
MWDYIKYYFAPLVQALAIWGFYKGGDFTWIAIGAFPAIAVFDALLPFDLSKRRMKSHFWAYLPVWISALLLPVMYFVFAW
SVGHHLSAWQLAGGVAGLAWLSVVPGVPATHELYHSRGRLARFAGRYGQIAFLDTMRMEVHVVGHHRDVGTAEDCDTARR
GTNLYSFVARSMLESTRLELKLDSDTLQKRGYSRWSIRHSLWRAILAVVVFLGIIYAIGGIKAAGLCLIAMVIARFWVEA
FNYYQHFGQVRVVGTPIEKRHVWNHYGTLSRLYAFEITNHADHHLNSYIPYYKLVPDRQAIIMPSIIVCFLSGFVPSLWY
GRIIKPALRRWDNEYASQAERRLAMEQNRSAGWDDWFEEPPSKPGKPSTTAWAGS

Specific function: Oxidizes toluene and xylenes to (methyl)benzyl alcohols. The enzyme has a broad specificity and also oxidizes (methyl)benzyl alcohols to (methyl)benzaldehydes and indole to indoxyl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 42899; Mature: 42899

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDYIKYYFAPLVQALAIWGFYKGGDFTWIAIGAFPAIAVFDALLPFDLSKRRMKSHFWA
CCHHHHHHHHHHHHHHHHHHCEECCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YLPVWISALLLPVMYFVFAWSVGHHLSAWQLAGGVAGLAWLSVVPGVPATHELYHSRGRL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ARFAGRYGQIAFLDTMRMEVHVVGHHRDVGTAEDCDTARRGTNLYSFVARSMLESTRLEL
HHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHEEE
KLDSDTLQKRGYSRWSIRHSLWRAILAVVVFLGIIYAIGGIKAAGLCLIAMVIARFWVEA
EECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
FNYYQHFGQVRVVGTPIEKRHVWNHYGTLSRLYAFEITNHADHHLNSYIPYYKLVPDRQA
HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCH
IIMPSIIVCFLSGFVPSLWYGRIIKPALRRWDNEYASQAERRLAMEQNRSAGWDDWFEEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PSKPGKPSTTAWAGS
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MWDYIKYYFAPLVQALAIWGFYKGGDFTWIAIGAFPAIAVFDALLPFDLSKRRMKSHFWA
CCHHHHHHHHHHHHHHHHHHCEECCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YLPVWISALLLPVMYFVFAWSVGHHLSAWQLAGGVAGLAWLSVVPGVPATHELYHSRGRL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ARFAGRYGQIAFLDTMRMEVHVVGHHRDVGTAEDCDTARRGTNLYSFVARSMLESTRLEL
HHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHEEE
KLDSDTLQKRGYSRWSIRHSLWRAILAVVVFLGIIYAIGGIKAAGLCLIAMVIARFWVEA
EECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
FNYYQHFGQVRVVGTPIEKRHVWNHYGTLSRLYAFEITNHADHHLNSYIPYYKLVPDRQA
HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCH
IIMPSIIVCFLSGFVPSLWYGRIIKPALRRWDNEYASQAERRLAMEQNRSAGWDDWFEEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PSKPGKPSTTAWAGS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1999388 [H]