| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is etfA [H]
Identifier: 91782265
GI number: 91782265
Start: 991456
End: 992391
Strand: Direct
Name: etfA [H]
Synonym: Bxe_A3569
Alternate gene names: 91782265
Gene position: 991456-992391 (Clockwise)
Preceding gene: 91782264
Following gene: 91782268
Centisome position: 20.25
GC content: 63.68
Gene sequence:
>936_bases ATGACGATACTGGTAATTGCTGAACACGACAACACTGTCGTGAAGGTTGCGACGCTGAACACGGTGGCGGCGGCGCTGAA GCTCGGCGGGGACGTCCACGTCCTGGTGGCCGGGCACAATGCGCAGGACGCGGCAGACGCGGCCGCCAGGATCGCGGGTG TGACGAAGGTTCTCCTCGCCGACGCCCCCCAGCTGGCGGCCGGGTTGGCGGAGAACGTCGAGGCAACAGTATTACAGGTA GCGAAGGACTACATCCACATCCTGGCGCCGGCAACGGCGGCGGGCAAAAACCTCGCGCCGCGCATTGCGGCGAAACTGGA TGTTGCGCAGGTGAGCGATATCACGGCAGTGGTGAGCCCGGACACGTTTGAGCGGCCGATCTATGCCGGTAACGCAATTG CCACCGTTCGATCGGCCGATCCGGTGAAAGTGCTCACAGTGCGCACGACCGCTTTCGATGCGGTGGCAGCGGAAGGGGGA GCCGCAACGATCGAGAAGATCGGGGCGCCGGCCGATCGGGGGTTATCGCAGTTCGTGAGCCGCGAGGTGACGAAGCTGGA CCGCCCTGAGCTGACGGGCGCTCCAGTCATCGTCTCGGGTGGGCGTGGACTCGGCAGCGCAGAGAACTACGCGAGGGTGC TTGAGCCGCTGGCGGACAGACTGGGCGCAGCCCTCGGCGCATCACGCGCGGCGGTGGACGCGGGATACGTGCCGAACGAT TACCAGGTAGGACAGACAGGCAAGATCGTCGCGCCGCAGCTTTACGTCGCTGTCGGAATTTCAGGCGCGATCCAGCATCT GGCAGGGATGAAGGACTCTAAAGTCATCGTGGCAATCAACAAGGACGAGGAAGCGCCAATCTTCAGTGTGGCCGATTACG GGCTGGTTGCCGACCTGTTTAACGCGGTGCCGGATCTTGTGAATGCGCTGGGCTGA
Upstream 100 bases:
>100_bases CCGCCGGTGCGGCGCGCGCAAGGCATGAAGGTGCCGGATGTGAAGACGCTGGTGGAAAAGCTGACCATCGAAGCGAAGGT GCTGTAAGAAAGGAATACAA
Downstream 100 bases:
>100_bases ATCGGTGTCGGTTTGACCGGGCAAGCGCATCTGCGATCTAAAAGCCATGGTTGACGGATGCGCCGCTTCGCCTGTCCAAA GCCGAAAATGGCGCTCCGTG
Product: putative electron transfer flavoprotein, alpha subunit
Products: NA
Alternate protein names: Alpha-ETF; Electron transfer flavoprotein large subunit; ETFLS [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTILVIAEHDNTVVKVATLNTVAAALKLGGDVHVLVAGHNAQDAADAAARIAGVTKVLLADAPQLAAGLAENVEATVLQV AKDYIHILAPATAAGKNLAPRIAAKLDVAQVSDITAVVSPDTFERPIYAGNAIATVRSADPVKVLTVRTTAFDAVAAEGG AATIEKIGAPADRGLSQFVSREVTKLDRPELTGAPVIVSGGRGLGSAENYARVLEPLADRLGAALGASRAAVDAGYVPND YQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGLVADLFNAVPDLVNALG
Sequences:
>Translated_311_residues MTILVIAEHDNTVVKVATLNTVAAALKLGGDVHVLVAGHNAQDAADAAARIAGVTKVLLADAPQLAAGLAENVEATVLQV AKDYIHILAPATAAGKNLAPRIAAKLDVAQVSDITAVVSPDTFERPIYAGNAIATVRSADPVKVLTVRTTAFDAVAAEGG AATIEKIGAPADRGLSQFVSREVTKLDRPELTGAPVIVSGGRGLGSAENYARVLEPLADRLGAALGASRAAVDAGYVPND YQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGLVADLFNAVPDLVNALG >Mature_310_residues TILVIAEHDNTVVKVATLNTVAAALKLGGDVHVLVAGHNAQDAADAAARIAGVTKVLLADAPQLAAGLAENVEATVLQVA KDYIHILAPATAAGKNLAPRIAAKLDVAQVSDITAVVSPDTFERPIYAGNAIATVRSADPVKVLTVRTTAFDAVAAEGGA ATIEKIGAPADRGLSQFVSREVTKLDRPELTGAPVIVSGGRGLGSAENYARVLEPLADRLGAALGASRAAVDAGYVPNDY QVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGLVADLFNAVPDLVNALG
Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]
COG id: COG2025
COG function: function code C; Electron transfer flavoprotein, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ETF alpha-subunit/fixB family [H]
Homologues:
Organism=Homo sapiens, GI4503607, Length=311, Percent_Identity=58.5209003215434, Blast_Score=347, Evalue=9e-96, Organism=Homo sapiens, GI189181759, Length=264, Percent_Identity=60.6060606060606, Blast_Score=310, Evalue=1e-84, Organism=Escherichia coli, GI1786226, Length=234, Percent_Identity=38.8888888888889, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1787990, Length=258, Percent_Identity=34.4961240310078, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI87082157, Length=217, Percent_Identity=32.7188940092166, Blast_Score=83, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17506929, Length=314, Percent_Identity=55.0955414012739, Blast_Score=318, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6325261, Length=294, Percent_Identity=44.5578231292517, Blast_Score=243, Evalue=3e-65, Organism=Drosophila melanogaster, GI17136898, Length=314, Percent_Identity=60.5095541401274, Blast_Score=349, Evalue=1e-96, Organism=Drosophila melanogaster, GI24652801, Length=314, Percent_Identity=60.5095541401274, Blast_Score=349, Evalue=1e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001308 - InterPro: IPR014730 - InterPro: IPR014731 - InterPro: IPR018206 - InterPro: IPR014729 [H]
Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]
EC number: NA
Molecular weight: Translated: 31686; Mature: 31555
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00696 ETF_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILVIAEHDNTVVKVATLNTVAAALKLGGDVHVLVAGHNAQDAADAAARIAGVTKVLLA CEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC DAPQLAAGLAENVEATVLQVAKDYIHILAPATAAGKNLAPRIAAKLDVAQVSDITAVVSP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHCCEEEEECC DTFERPIYAGNAIATVRSADPVKVLTVRTTAFDAVAAEGGAATIEKIGAPADRGLSQFVS CCCCCCEECCCCEEEEECCCCEEEEEEEEHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH REVTKLDRPELTGAPVIVSGGRGLGSAENYARVLEPLADRLGAALGASRAAVDAGYVPND HHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC YQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGLVADLF CEECCCCCEECCEEEEEECHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHH NAVPDLVNALG HHHHHHHHHCC >Mature Secondary Structure TILVIAEHDNTVVKVATLNTVAAALKLGGDVHVLVAGHNAQDAADAAARIAGVTKVLLA EEEEEEECCCCEEEEEEHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC DAPQLAAGLAENVEATVLQVAKDYIHILAPATAAGKNLAPRIAAKLDVAQVSDITAVVSP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHCCEEEEECC DTFERPIYAGNAIATVRSADPVKVLTVRTTAFDAVAAEGGAATIEKIGAPADRGLSQFVS CCCCCCEECCCCEEEEECCCCEEEEEEEEHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH REVTKLDRPELTGAPVIVSGGRGLGSAENYARVLEPLADRLGAALGASRAAVDAGYVPND HHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC YQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGLVADLF CEECCCCCEECCEEEEEECHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHH NAVPDLVNALG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]