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The map label for this gene is yfdE [H]

Identifier: 91782241

GI number: 91782241

Start: 962124

End: 963443

Strand: Reverse

Name: yfdE [H]

Synonym: Bxe_A3594

Alternate gene names: 91782241

Gene position: 963443-962124 (Counterclockwise)

Preceding gene: 91782242

Following gene: 91782240

Centisome position: 19.68

GC content: 62.2

Gene sequence:

>1320_bases
ATGAACGATATCAACAGGCAACGCGGCGAGGCGCACGGTGAAGCTGCTGGCCCCCAAGGTCCGTTGCTCGGATTGCGCGT
GATCGATTTCACCCATTTCGTCGCAGGTCCTTACGCGACGATGCTGCTCGCCGATCTCGGCGCAGAAGTAATCAAGATCG
AAAATCCGGAGCGCGGCGACGAGTTCCGCCACTACCCGCCCTATAGCGAGAAGCTCAACGGTGAGGGCAGCCCGTTTCTC
TGGGTGAATCGCAACAAGAAGAGCCTGGCCGTTAACATGAAGTCGACACATGGGCTACGCATCGTCAAGGAGTTGATTCG
CGGCGCGGATATCGTCGTCGAGAATTTCTCGCGCGGCGTGATGGAGCGCTTCGGTCTCGATTACGAGACCGTCAGCAGCG
ACAACCCCGGTCTTATTTTCTGTAGCGTCTCGGCATACGGCGATGGCGGGACGGGTACGACACGTGTCGGCTTCGATCCG
ATCGCGCAAGCGGAAAGCGGCTTCATGTCGCTCAATGGTTACGCCGATCGCGAAGGCGTGCGCGCGGGCGCGTCCGTCAT
CGACATCAGCACCGCAATGATGGCGTCCAACGCGATCCTAGCGGCCGTGGTCGAGCGCCAACGCACGGGTAAAGGCCAGC
GGGTCGAAACGTCGCTTTACGCGACCGCCATGACGATGATCGGTTACGCACCCTCGCAGACGCTCATGGATCCAGACTGG
GTGTCGACACGGCACGGCAACTCCAGCCCCGATACGGCGCCAACCGGCGTGTACTACGCATCGGACGGCCCGATCTACAT
TGCATGCACGAGCACGGCGATCTACCAGCGACTCTTCACGCTGATAGGACGTGAAGACCTCGCGAACGATGCGTCGCTGA
TCGTCAAGAAAAACCGGCTTGCGGCGCGCGACCAGCTCAATACCGCGCTCAACGCGGTGCTGGCGACAAACACCGTCGAG
CACTGGATGCCGCGTCTGCTTGCAGCTCGTATTCCTGCGGGGCCGGTGCGTACAATCGCAGAAGCGATCCGCTCGCCCGA
AGCGGAAGAGCTAAACATCGTCAGCTGGATTGCGCATCCGACCGCCGGCAAGGTTCCTAACATCCGCCTGCCGATCACGC
TGAGCAGAAGCCCGCTCGCCGCGCCAGTCGCTGCGCCCGCGCTCGGCCAGCATACGCGCTACGTGCTGCGCCACACGCTC
GGCTACGACGAAGGTCAGATCGATATGCTGGAACGCGCGGGCGCTTTCGGCGAATCGGGCCTCGCACCGGAAGACACTGC
GGCGGCAGCCCGCTGTCCGTTCCTGAACGCGGCGTTGTAA

Upstream 100 bases:

>100_bases
GGTGCGCAAATACGCCAACAACATCACTGGTGTGATGGCGTTGCCTGTACGCATCGCGGCGTAAGCGCCGGTTTCTCAAC
ATGCAAAGGAGACATTGCAG

Downstream 100 bases:

>100_bases
TCCGCGCGAAGCGGCGCGGGATACATCGCGCCGCCAGAACAACTGCAGTATCGAGGAGACACGATCGTGGAAAAGATCGA
GACCGAATTTGATTACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNDINRQRGEAHGEAAGPQGPLLGLRVIDFTHFVAGPYATMLLADLGAEVIKIENPERGDEFRHYPPYSEKLNGEGSPFL
WVNRNKKSLAVNMKSTHGLRIVKELIRGADIVVENFSRGVMERFGLDYETVSSDNPGLIFCSVSAYGDGGTGTTRVGFDP
IAQAESGFMSLNGYADREGVRAGASVIDISTAMMASNAILAAVVERQRTGKGQRVETSLYATAMTMIGYAPSQTLMDPDW
VSTRHGNSSPDTAPTGVYYASDGPIYIACTSTAIYQRLFTLIGREDLANDASLIVKKNRLAARDQLNTALNAVLATNTVE
HWMPRLLAARIPAGPVRTIAEAIRSPEAEELNIVSWIAHPTAGKVPNIRLPITLSRSPLAAPVAAPALGQHTRYVLRHTL
GYDEGQIDMLERAGAFGESGLAPEDTAAAARCPFLNAAL

Sequences:

>Translated_439_residues
MNDINRQRGEAHGEAAGPQGPLLGLRVIDFTHFVAGPYATMLLADLGAEVIKIENPERGDEFRHYPPYSEKLNGEGSPFL
WVNRNKKSLAVNMKSTHGLRIVKELIRGADIVVENFSRGVMERFGLDYETVSSDNPGLIFCSVSAYGDGGTGTTRVGFDP
IAQAESGFMSLNGYADREGVRAGASVIDISTAMMASNAILAAVVERQRTGKGQRVETSLYATAMTMIGYAPSQTLMDPDW
VSTRHGNSSPDTAPTGVYYASDGPIYIACTSTAIYQRLFTLIGREDLANDASLIVKKNRLAARDQLNTALNAVLATNTVE
HWMPRLLAARIPAGPVRTIAEAIRSPEAEELNIVSWIAHPTAGKVPNIRLPITLSRSPLAAPVAAPALGQHTRYVLRHTL
GYDEGQIDMLERAGAFGESGLAPEDTAAAARCPFLNAAL
>Mature_439_residues
MNDINRQRGEAHGEAAGPQGPLLGLRVIDFTHFVAGPYATMLLADLGAEVIKIENPERGDEFRHYPPYSEKLNGEGSPFL
WVNRNKKSLAVNMKSTHGLRIVKELIRGADIVVENFSRGVMERFGLDYETVSSDNPGLIFCSVSAYGDGGTGTTRVGFDP
IAQAESGFMSLNGYADREGVRAGASVIDISTAMMASNAILAAVVERQRTGKGQRVETSLYATAMTMIGYAPSQTLMDPDW
VSTRHGNSSPDTAPTGVYYASDGPIYIACTSTAIYQRLFTLIGREDLANDASLIVKKNRLAARDQLNTALNAVLATNTVE
HWMPRLLAARIPAGPVRTIAEAIRSPEAEELNIVSWIAHPTAGKVPNIRLPITLSRSPLAAPVAAPALGQHTRYVLRHTL
GYDEGQIDMLERAGAFGESGLAPEDTAAAARCPFLNAAL

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=399, Percent_Identity=30.5764411027569, Blast_Score=221, Evalue=9e-58,
Organism=Homo sapiens, GI300863124, Length=421, Percent_Identity=29.4536817102138, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI300863126, Length=399, Percent_Identity=29.3233082706767, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI13376042, Length=421, Percent_Identity=26.3657957244656, Blast_Score=165, Evalue=7e-41,
Organism=Homo sapiens, GI266456254, Length=396, Percent_Identity=25, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI42794625, Length=396, Percent_Identity=25, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI266458393, Length=200, Percent_Identity=29, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI266458397, Length=200, Percent_Identity=29, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI42822893, Length=147, Percent_Identity=30.6122448979592, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI266458395, Length=147, Percent_Identity=30.6122448979592, Blast_Score=79, Evalue=9e-15,
Organism=Escherichia coli, GI87082093, Length=341, Percent_Identity=31.0850439882698, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI1788717, Length=418, Percent_Identity=27.7511961722488, Blast_Score=138, Evalue=8e-34,
Organism=Escherichia coli, GI1786222, Length=405, Percent_Identity=27.1604938271605, Blast_Score=103, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI32564160, Length=353, Percent_Identity=22.6628895184136, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115535051, Length=379, Percent_Identity=21.8997361477573, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648431, Length=392, Percent_Identity=34.6938775510204, Blast_Score=231, Evalue=7e-61,
Organism=Drosophila melanogaster, GI24585488, Length=205, Percent_Identity=29.2682926829268, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 47224; Mature: 47224

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDINRQRGEAHGEAAGPQGPLLGLRVIDFTHFVAGPYATMLLADLGAEVIKIENPERGD
CCCCCHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
EFRHYPPYSEKLNGEGSPFLWVNRNKKSLAVNMKSTHGLRIVKELIRGADIVVENFSRGV
CCCCCCCHHHHCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHH
MERFGLDYETVSSDNPGLIFCSVSAYGDGGTGTTRVGFDPIAQAESGFMSLNGYADREGV
HHHHCCCCEEECCCCCCEEEEEEEECCCCCCCCEECCCCCHHHHCCCCEEECCCCCCCHH
RAGASVIDISTAMMASNAILAAVVERQRTGKGQRVETSLYATAMTMIGYAPSQTLMDPDW
HCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCC
VSTRHGNSSPDTAPTGVYYASDGPIYIACTSTAIYQRLFTLIGREDLANDASLIVKKNRL
CCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHCHHHCCCCCCEEEECCHH
AARDQLNTALNAVLATNTVEHWMPRLLAARIPAGPVRTIAEAIRSPEAEELNIVSWIAHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECC
TAGKVPNIRLPITLSRSPLAAPVAAPALGQHTRYVLRHTLGYDEGQIDMLERAGAFGESG
CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC
LAPEDTAAAARCPFLNAAL
CCCCCHHHHHHCCCHHCCC
>Mature Secondary Structure
MNDINRQRGEAHGEAAGPQGPLLGLRVIDFTHFVAGPYATMLLADLGAEVIKIENPERGD
CCCCCHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
EFRHYPPYSEKLNGEGSPFLWVNRNKKSLAVNMKSTHGLRIVKELIRGADIVVENFSRGV
CCCCCCCHHHHCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHH
MERFGLDYETVSSDNPGLIFCSVSAYGDGGTGTTRVGFDPIAQAESGFMSLNGYADREGV
HHHHCCCCEEECCCCCCEEEEEEEECCCCCCCCEECCCCCHHHHCCCCEEECCCCCCCHH
RAGASVIDISTAMMASNAILAAVVERQRTGKGQRVETSLYATAMTMIGYAPSQTLMDPDW
HCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCC
VSTRHGNSSPDTAPTGVYYASDGPIYIACTSTAIYQRLFTLIGREDLANDASLIVKKNRL
CCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHCHHHCCCCCCEEEECCHH
AARDQLNTALNAVLATNTVEHWMPRLLAARIPAGPVRTIAEAIRSPEAEELNIVSWIAHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECC
TAGKVPNIRLPITLSRSPLAAPVAAPALGQHTRYVLRHTLGYDEGQIDMLERAGAFGESG
CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC
LAPEDTAAAARCPFLNAAL
CCCCCHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]