| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782227
Identifier: 91782227
GI number: 91782227
Start: 946396
End: 946794
Strand: Direct
Name: 91782227
Synonym: Bxe_A3608
Alternate gene names: NA
Gene position: 946396-946794 (Clockwise)
Preceding gene: 91782226
Following gene: 91782228
Centisome position: 19.33
GC content: 59.9
Gene sequence:
>399_bases ATGGCTACGACACCCAACATGCCCGAACACGACAAACTCGACACGTTGCAGTCGCGCTTTGTACAGGTTGACAAGCTCGC GTGGAAGCCGACGCCCACGCCGGGCATCGACATGAAGATTCTAATGGAAGAACCTGAGAGCGGACTGCTGACGGCGCTGT TCCGCTGGGAGCCGGGCACTGAACTGCCGCTGCATGAGCACGTCGAGGTCGAGCAGACCTATGTGCTGGAAGGCAGCATC GTCGACGACGAAGGCGAGGTGCTTGCGGGCGATTACGTATGGCGGCCCAAGGGAAATCGCCATATCGCACGCGCGCCGAG GGGCGCACTCGTGCTGTCGTTCTTTCTGAAGCCAAACAGGTTTCTGTCGGGCGAGCTGGCAGGACAGGAACTCAAGTAA
Upstream 100 bases:
>100_bases CCAAGGGTGTTGCGGTGGGACAGAGCGCGCGCGAGGCCGCCCGCCATCTGCTGTCCTGAGCACACCGATTCGCGTAACGA ACCAGAGAGAGAGGACAAAC
Downstream 100 bases:
>100_bases AGCGGCACGCGGGTCGACATGGGGAAAGGTGCTCAGGTGGTCAACGAATTCGATGTGATCGTGGTGGGCGCGGGTGCCGG CGGTATGGCCGCGGCGGTCA
Product: anti-Sigm factor, ChrR
Products: NA
Alternate protein names: Anti-Sigma Factor ChrR
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MATTPNMPEHDKLDTLQSRFVQVDKLAWKPTPTPGIDMKILMEEPESGLLTALFRWEPGTELPLHEHVEVEQTYVLEGSI VDDEGEVLAGDYVWRPKGNRHIARAPRGALVLSFFLKPNRFLSGELAGQELK
Sequences:
>Translated_132_residues MATTPNMPEHDKLDTLQSRFVQVDKLAWKPTPTPGIDMKILMEEPESGLLTALFRWEPGTELPLHEHVEVEQTYVLEGSI VDDEGEVLAGDYVWRPKGNRHIARAPRGALVLSFFLKPNRFLSGELAGQELK >Mature_131_residues ATTPNMPEHDKLDTLQSRFVQVDKLAWKPTPTPGIDMKILMEEPESGLLTALFRWEPGTELPLHEHVEVEQTYVLEGSIV DDEGEVLAGDYVWRPKGNRHIARAPRGALVLSFFLKPNRFLSGELAGQELK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14891; Mature: 14760
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTPNMPEHDKLDTLQSRFVQVDKLAWKPTPTPGIDMKILMEEPESGLLTALFRWEPGT CCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCC ELPLHEHVEVEQTYVLEGSIVDDEGEVLAGDYVWRPKGNRHIARAPRGALVLSFFLKPNR CCCCCCCCCCEEEEEEECCEECCCCCEEECCEEECCCCCCEECCCCCCEEEEEEEECCCC FLSGELAGQELK EECCCCCCCCCC >Mature Secondary Structure ATTPNMPEHDKLDTLQSRFVQVDKLAWKPTPTPGIDMKILMEEPESGLLTALFRWEPGT CCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCC ELPLHEHVEVEQTYVLEGSIVDDEGEVLAGDYVWRPKGNRHIARAPRGALVLSFFLKPNR CCCCCCCCCCEEEEEEECCEECCCCCEEECCEEECCCCCCEECCCCCCEEEEEEEECCCC FLSGELAGQELK EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA