| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782208
Identifier: 91782208
GI number: 91782208
Start: 931544
End: 932080
Strand: Direct
Name: 91782208
Synonym: Bxe_A3627
Alternate gene names: NA
Gene position: 931544-932080 (Clockwise)
Preceding gene: 91782205
Following gene: 91782209
Centisome position: 19.03
GC content: 55.31
Gene sequence:
>537_bases ATGAATTGGACAACGAGAGGGAAAATGAAAACGCTCAATCGAAGGGAGATTCTGGGCTGCAGCGCGGCGTTAGTGACGTC CGCGGTCTGCACGATGTCAGGAAGCGCTTTTGCACAGTCGGTCTCGACGCTTGATGTGATTCGCAAAGCGAAGGTGCTCA AGATTGGGGTAGTAGCCGATGGTGAGCCAAATTTCCACAAAGACCCCGGTACGGGGAAATGGAGCGGAATTTACATCGAT TTCGCCAACAGTCTCGCGTCGTCGTTGAATGCGCAGTTTCAACTCTGCGAGACCACATGGGGCCATTTCCAGCGCCACTG TGCCCCCAAAGCACGGTTGCACGCTTTGAAGCGCATCATTACCTCCTCCGAGCTGCCGAATCTAACTTCTGCCTTGTTCG GTAAGCCTCACGGGCTTGAAGGCGCGGCTGACACCTTCTCGTTTTTCAACAGTGCTGGCGTGGCGCCAATGATCCGCTCG TGCAACCGACGTGGCAGCGTAGCCATCAAAACACTCAGTGGCTTCCGATGCCGCTGA
Upstream 100 bases:
>100_bases CACGCAAACATATAGCATTTGCGCCATTTTTTGGGTCGGTTCTACTTGCGATGAGTGGCGATTCTGTACTGGGTGCCACC GGAACGCAGCGCTCATAGCA
Downstream 100 bases:
>100_bases TTATTCGACACCCGAGTACATCATTGTTGATGAGTTTGAGTTCAGGCGATGTCCTTTTTTGCCGGACTGCCCGAGGCAAG GAGAGAAGCATATGTTTCAT
Product: ABC amino acid transporter, periplasmic ligand binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNWTTRGKMKTLNRREILGCSAALVTSAVCTMSGSAFAQSVSTLDVIRKAKVLKIGVVADGEPNFHKDPGTGKWSGIYID FANSLASSLNAQFQLCETTWGHFQRHCAPKARLHALKRIITSSELPNLTSALFGKPHGLEGAADTFSFFNSAGVAPMIRS CNRRGSVAIKTLSGFRCR
Sequences:
>Translated_178_residues MNWTTRGKMKTLNRREILGCSAALVTSAVCTMSGSAFAQSVSTLDVIRKAKVLKIGVVADGEPNFHKDPGTGKWSGIYID FANSLASSLNAQFQLCETTWGHFQRHCAPKARLHALKRIITSSELPNLTSALFGKPHGLEGAADTFSFFNSAGVAPMIRS CNRRGSVAIKTLSGFRCR >Mature_178_residues MNWTTRGKMKTLNRREILGCSAALVTSAVCTMSGSAFAQSVSTLDVIRKAKVLKIGVVADGEPNFHKDPGTGKWSGIYID FANSLASSLNAQFQLCETTWGHFQRHCAPKARLHALKRIITSSELPNLTSALFGKPHGLEGAADTFSFFNSAGVAPMIRS CNRRGSVAIKTLSGFRCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19250; Mature: 19250
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWTTRGKMKTLNRREILGCSAALVTSAVCTMSGSAFAQSVSTLDVIRKAKVLKIGVVAD CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEC GEPNFHKDPGTGKWSGIYIDFANSLASSLNAQFQLCETTWGHFQRHCAPKARLHALKRII CCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TSSELPNLTSALFGKPHGLEGAADTFSFFNSAGVAPMIRSCNRRGSVAIKTLSGFRCR HHCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCC >Mature Secondary Structure MNWTTRGKMKTLNRREILGCSAALVTSAVCTMSGSAFAQSVSTLDVIRKAKVLKIGVVAD CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEEEC GEPNFHKDPGTGKWSGIYIDFANSLASSLNAQFQLCETTWGHFQRHCAPKARLHALKRII CCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TSSELPNLTSALFGKPHGLEGAADTFSFFNSAGVAPMIRSCNRRGSVAIKTLSGFRCR HHCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA