| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pepA [H]
Identifier: 91782196
GI number: 91782196
Start: 920004
End: 921530
Strand: Direct
Name: pepA [H]
Synonym: Bxe_A3638
Alternate gene names: 91782196
Gene position: 920004-921530 (Clockwise)
Preceding gene: 91782192
Following gene: 91782197
Centisome position: 18.79
GC content: 65.16
Gene sequence:
>1527_bases ATGGACTTTAGCATAAAAGCCTGTGATTGGACCAAAGGCTCGTCAAACGGTTTCCTGACTGGAAAATCCGATTGCATCGT AATCGGTGTGTTCGAGTCGCAAACCCTCTCGGGCGCGGCTCTCGAGATCGACGCGGCCACCAAGGGCCTGTTGACCCGCA TCATCAAGGCCGGCGACATGGACGGCAAGGCCGGCACCACGCTGTTCCTGCACGAAGTGTCGGGTATCGGCGCTTCCCGC GTGCTGCTGGTCGGCCTCGGCAAGCAGGACGCTTTCAACCAGAAAGCCTACGGCGACGCCGCACGGGCCGCCTGGCGCGC ACTGCTGTCCACCAAGATCGTCCAGGTCACCTTCACGCTGGCGCAACTGCCGATCCTCGAGCGTTCGGCGGATTGGGCGG TGCGCGCCGCGATCCTCGCGCTGCGCGAGCTGACCTACAAGTTCACGCAGATGAAGAGCAAGCCGGACACGTCGGCGCGT GCGTTGAAGCGCATCGTCTTCAGCGTCAACACGGGCGACGAGAAGGCCGCCAAGCTGGCCGCGAAGCAGGGCGCGGCGCT CGCCAACGGCATGGACCTCACGCGCGACCTCGGCAACCTGCCGAGCAACGTCTGCACGCCAACCTACCTCGCCAACACGG CGAAGAAGCTCGCCAAAGACTGGAAGCTGAAGGTCGAAGTGCTGGGCGAAAAGCAGTGTGAAGCGCTCAAGATGGGCTCG TTCCTGTCGGTCACGGCCGGTTCGGTCGAACCGGCGCAGTTCATCGTGCTGCAATACCAGGGCGGCGCCGCGAAGGCCGC GCCGGTGGTGCTGGTCGGCAAGGGCGTGACGTTCGACACGGGCGGCATCTCGCTCAAGCCGGGCGAAGGCATGGACGAGA TGAAATACGACATGTGCGGCGCCGGTTCGGTGCTGGGCACGTTGCGCGCCGTCGCGGAAATGGGCTTGAAAATCAACGTG GTGGGCATCATTCCGGCGGTGGAGAACATGCCGTCGGCTACGGCCACCAAGCCGGGCGACATCGTCACCAGCATGAAGGG CCTGACGATCGAAGTGCTGAACACGGACGCCGAAGGCCGGCTGATCCTGTGCGACGCGCTCACCTATGCGGAGCGCTTCA AGCCGGCCGCGGTGATCGACATCGCCACGCTCACGGGTGCCTGCATCATTGCGCTCGGCCACCACAACAGCGGCCTGTTC TCCAAAGACGACGCGCTGGCGGGCGAGTTGCTCGACGCATCGCGTGAAGCGTCGGACCCGGCCTGGCGCATGCCGCTCGA CGACGAGTATCAGGATCAGCTCAAGTCGAACTTCGCGGATCTGGCCAACATCGGCGGCCGTCCGGCGGGCAGCGTGACGG CGGCGTGCTTCCTGTCGCGCTTCACGGAGGCTTACCCGTGGGCGCATCTGGACATCGCGGGTACGGCGTGGAAGAGCGGT GCGGCGAAGGGGGCAACGGGCCGTCCGGTGCCGTTGCTCGCGCAGTTCCTGATCGATAGGGCCGCCGACGGTCGCGCCAC GCAATGA
Upstream 100 bases:
>100_bases GGTTGCTTCCCGTCACACCTCCGGTGCAGCCGCCGCGGGAAAAATAGCGGATAATTGCGGCTTTCATCCTAAGCCCAGAT TTTATCCGAGGACAAGCGCG
Downstream 100 bases:
>100_bases CGCAATGCAGTAAAGATGCAGGCCCGGCCGCGCAAGCAGTCGCCGGGCGGAGCCGCCGATGACGAGAATCGACTTTCACT CGAACGTCGGCGATTCGCTG
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MDFSIKACDWTKGSSNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDMDGKAGTTLFLHEVSGIGASR VLLVGLGKQDAFNQKAYGDAARAAWRALLSTKIVQVTFTLAQLPILERSADWAVRAAILALRELTYKFTQMKSKPDTSAR ALKRIVFSVNTGDEKAAKLAAKQGAALANGMDLTRDLGNLPSNVCTPTYLANTAKKLAKDWKLKVEVLGEKQCEALKMGS FLSVTAGSVEPAQFIVLQYQGGAAKAAPVVLVGKGVTFDTGGISLKPGEGMDEMKYDMCGAGSVLGTLRAVAEMGLKINV VGIIPAVENMPSATATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLF SKDDALAGELLDASREASDPAWRMPLDDEYQDQLKSNFADLANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLAQFLIDRAADGRATQ
Sequences:
>Translated_508_residues MDFSIKACDWTKGSSNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDMDGKAGTTLFLHEVSGIGASR VLLVGLGKQDAFNQKAYGDAARAAWRALLSTKIVQVTFTLAQLPILERSADWAVRAAILALRELTYKFTQMKSKPDTSAR ALKRIVFSVNTGDEKAAKLAAKQGAALANGMDLTRDLGNLPSNVCTPTYLANTAKKLAKDWKLKVEVLGEKQCEALKMGS FLSVTAGSVEPAQFIVLQYQGGAAKAAPVVLVGKGVTFDTGGISLKPGEGMDEMKYDMCGAGSVLGTLRAVAEMGLKINV VGIIPAVENMPSATATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLF SKDDALAGELLDASREASDPAWRMPLDDEYQDQLKSNFADLANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLAQFLIDRAADGRATQ >Mature_508_residues MDFSIKACDWTKGSSNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDMDGKAGTTLFLHEVSGIGASR VLLVGLGKQDAFNQKAYGDAARAAWRALLSTKIVQVTFTLAQLPILERSADWAVRAAILALRELTYKFTQMKSKPDTSAR ALKRIVFSVNTGDEKAAKLAAKQGAALANGMDLTRDLGNLPSNVCTPTYLANTAKKLAKDWKLKVEVLGEKQCEALKMGS FLSVTAGSVEPAQFIVLQYQGGAAKAAPVVLVGKGVTFDTGGISLKPGEGMDEMKYDMCGAGSVLGTLRAVAEMGLKINV VGIIPAVENMPSATATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLF SKDDALAGELLDASREASDPAWRMPLDDEYQDQLKSNFADLANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG AAKGATGRPVPLLAQFLIDRAADGRATQ
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=524, Percent_Identity=36.8320610687023, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI47155554, Length=333, Percent_Identity=31.5315315315315, Blast_Score=117, Evalue=4e-26, Organism=Escherichia coli, GI1790710, Length=505, Percent_Identity=50.0990099009901, Blast_Score=516, Evalue=1e-147, Organism=Escherichia coli, GI87082123, Length=320, Percent_Identity=42.8125, Blast_Score=200, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17556903, Length=303, Percent_Identity=35.3135313531353, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17565172, Length=445, Percent_Identity=25.8426966292135, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI21355725, Length=334, Percent_Identity=36.8263473053892, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI24661038, Length=334, Percent_Identity=37.125748502994, Blast_Score=204, Evalue=9e-53, Organism=Drosophila melanogaster, GI20129969, Length=500, Percent_Identity=30.6, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI161077148, Length=502, Percent_Identity=30.8764940239044, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI20130057, Length=502, Percent_Identity=30.8764940239044, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI24662227, Length=329, Percent_Identity=35.258358662614, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI21355645, Length=506, Percent_Identity=28.8537549407115, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24662223, Length=506, Percent_Identity=28.8537549407115, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI19922386, Length=529, Percent_Identity=27.9773156899811, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI20129963, Length=502, Percent_Identity=27.8884462151394, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI221379063, Length=310, Percent_Identity=30.9677419354839, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI221379062, Length=310, Percent_Identity=30.9677419354839, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI21357381, Length=310, Percent_Identity=30.9677419354839, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI24646701, Length=429, Percent_Identity=26.1072261072261, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24646703, Length=429, Percent_Identity=26.1072261072261, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI21358201, Length=429, Percent_Identity=26.1072261072261, Blast_Score=90, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 53468; Mature: 53468
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSIKACDWTKGSSNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDM CCCCEEECCCCCCCCCCEEECCCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHCCCC DGKAGTTLFLHEVSGIGASRVLLVGLGKQDAFNQKAYGDAARAAWRALLSTKIVQVTFTL CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHEEEHH AQLPILERSADWAVRAAILALRELTYKFTQMKSKPDTSARALKRIVFSVNTGDEKAAKLA HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHH AKQGAALANGMDLTRDLGNLPSNVCTPTYLANTAKKLAKDWKLKVEVLGEKQCEALKMGS HHCCCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCCC FLSVTAGSVEPAQFIVLQYQGGAAKAAPVVLVGKGVTFDTGGISLKPGEGMDEMKYDMCG EEEEECCCCCCEEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHHHCC AGSVLGTLRAVAEMGLKINVVGIIPAVENMPSATATKPGDIVTSMKGLTIEVLNTDAEGR CHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC LILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLFSKDDALAGELLDASREASDP EEEEEHHHHHHHCCCCEEEEHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCC AWRMPLDDEYQDQLKSNFADLANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG CEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC AAKGATGRPVPLLAQFLIDRAADGRATQ CCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDFSIKACDWTKGSSNGFLTGKSDCIVIGVFESQTLSGAALEIDAATKGLLTRIIKAGDM CCCCEEECCCCCCCCCCEEECCCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHCCCC DGKAGTTLFLHEVSGIGASRVLLVGLGKQDAFNQKAYGDAARAAWRALLSTKIVQVTFTL CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHEEEHH AQLPILERSADWAVRAAILALRELTYKFTQMKSKPDTSARALKRIVFSVNTGDEKAAKLA HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCHHHHHHH AKQGAALANGMDLTRDLGNLPSNVCTPTYLANTAKKLAKDWKLKVEVLGEKQCEALKMGS HHCCCHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCCC FLSVTAGSVEPAQFIVLQYQGGAAKAAPVVLVGKGVTFDTGGISLKPGEGMDEMKYDMCG EEEEECCCCCCEEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHHHCC AGSVLGTLRAVAEMGLKINVVGIIPAVENMPSATATKPGDIVTSMKGLTIEVLNTDAEGR CHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC LILCDALTYAERFKPAAVIDIATLTGACIIALGHHNSGLFSKDDALAGELLDASREASDP EEEEEHHHHHHHCCCCEEEEHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCC AWRMPLDDEYQDQLKSNFADLANIGGRPAGSVTAACFLSRFTEAYPWAHLDIAGTAWKSG CEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC AAKGATGRPVPLLAQFLIDRAADGRATQ CCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA