Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is sppA [H]

Identifier: 91782184

GI number: 91782184

Start: 898834

End: 899805

Strand: Direct

Name: sppA [H]

Synonym: Bxe_A3650

Alternate gene names: 91782184

Gene position: 898834-899805 (Clockwise)

Preceding gene: 91782183

Following gene: 91782186

Centisome position: 18.36

GC content: 66.67

Gene sequence:

>972_bases
ATGACGCCGGGCTATCAGCACCTCGCAACGCGCCTGCTCAACACGCCGCTCGCGATCGAGCAAGGCAGGTTCGCGGCCTT
CGCGGCGACCACCTGTGCTACGCCGCGCATCGCAGCTATCGGTAGCAGGGTCGGCGACGACATTGCGCAAGCCGGATCTC
GACCGCCGTATGCGATGGTCGCAGGCATTGCGGTCATCCAGGTGCAGGGGATGCTGCTGAGCAGGACCGGCGCAGCGGGC
CCGTGCCTGATGACCGGCGCCGACTTCGTGACGGGCTATGACGGTATCCGCGCGAACGTAAGCGCCGCTCTCGCCGATCC
TGCCGTGCGGGCGATCGTGCTCGATATCGACAGCCCGGGCGGTGAGATAGCGGGCCTGCTGGACCTCGCCGATGCAATCT
ACGCGGCGCGTCGGCGCAAGCCGCTATTGGCGGTCTGTAACGAGTGCGCCTTTAGCGCTGCATACTGCCTCGCCTCAGCA
TGCGAACAGGTCACCGTGCCGCGCACGGGCGGCACTGGTGGCGTCGGCGTGCTCGTCGTGCATGTGGATTTCTCGAAGGC
GCTCACCGATGCAGGAATCGCGGTCACGCTGATCACTTCCGGTGAGCACAAAGCGGACGGTAACGAGTACCGGCCACTCT
CGCGCGACGCATACCGACGCATCAAGGCCGATGTGGACGCAACCGCCAAGATGCTCATCGCGATGGTGGCGCACAATCGC
GGCCTGTCGCAAGCGCAGGTGCGCGACACGGAGGGCGCGACGTATCTGGGAGCGGCTGGCGTACGTGCCGGACTGGCTGA
CGCTGTGATGTCACCGGACGAGGCGCTTCTCTCACTGCTGCGTGAACTCGACCGACCAAGGGCGCTATCCAGCCACCAGG
AAGCGAGGGGACACCAATCGTCCCGGCGGCAGCAGCGCAGGTCGTGGGGCGAGCTTGCCTACCGCGCCGAGGTGAAGGCG
GCGCTGCGGTAG

Upstream 100 bases:

>100_bases
GACAAGCGCCCGCAGCCTTATCGGGTCAAGTCTGAGGTCGTGACCGAAAGCGGTCCCCGCGGCCGGTTCGCTGGTGAAAC
CGTCGTTCGTTGAGGCATCC

Downstream 100 bases:

>100_bases
CGATGCGGGCCCCTAGGTGGCCGCGACGACTGCCAGACATCCCAAGTGTTGACACGCCTGCGTGAGCGGCATAGCGGCCC
GCGTGTGCGGCGGTATGAAT

Product: serine peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTPGYQHLATRLLNTPLAIEQGRFAAFAATTCATPRIAAIGSRVGDDIAQAGSRPPYAMVAGIAVIQVQGMLLSRTGAAG
PCLMTGADFVTGYDGIRANVSAALADPAVRAIVLDIDSPGGEIAGLLDLADAIYAARRRKPLLAVCNECAFSAAYCLASA
CEQVTVPRTGGTGGVGVLVVHVDFSKALTDAGIAVTLITSGEHKADGNEYRPLSRDAYRRIKADVDATAKMLIAMVAHNR
GLSQAQVRDTEGATYLGAAGVRAGLADAVMSPDEALLSLLRELDRPRALSSHQEARGHQSSRRQQRRSWGELAYRAEVKA
ALR

Sequences:

>Translated_323_residues
MTPGYQHLATRLLNTPLAIEQGRFAAFAATTCATPRIAAIGSRVGDDIAQAGSRPPYAMVAGIAVIQVQGMLLSRTGAAG
PCLMTGADFVTGYDGIRANVSAALADPAVRAIVLDIDSPGGEIAGLLDLADAIYAARRRKPLLAVCNECAFSAAYCLASA
CEQVTVPRTGGTGGVGVLVVHVDFSKALTDAGIAVTLITSGEHKADGNEYRPLSRDAYRRIKADVDATAKMLIAMVAHNR
GLSQAQVRDTEGATYLGAAGVRAGLADAVMSPDEALLSLLRELDRPRALSSHQEARGHQSSRRQQRRSWGELAYRAEVKA
ALR
>Mature_322_residues
TPGYQHLATRLLNTPLAIEQGRFAAFAATTCATPRIAAIGSRVGDDIAQAGSRPPYAMVAGIAVIQVQGMLLSRTGAAGP
CLMTGADFVTGYDGIRANVSAALADPAVRAIVLDIDSPGGEIAGLLDLADAIYAARRRKPLLAVCNECAFSAAYCLASAC
EQVTVPRTGGTGGVGVLVVHVDFSKALTDAGIAVTLITSGEHKADGNEYRPLSRDAYRRIKADVDATAKMLIAMVAHNRG
LSQAQVRDTEGATYLGAAGVRAGLADAVMSPDEALLSLLRELDRPRALSSHQEARGHQSSRRQQRRSWGELAYRAEVKAA
LR

Specific function: Digestion of cleaved signal peptides. Required for efficient processing of precursors under conditions of hyper-secretion [H]

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S49 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004635
- InterPro:   IPR002142 [H]

Pfam domain/function: PF01343 Peptidase_S49 [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 33881; Mature: 33750

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGYQHLATRLLNTPLAIEQGRFAAFAATTCATPRIAAIGSRVGDDIAQAGSRPPYAMV
CCCCHHHHHHHHHCCCCEECCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
AGIAVIQVQGMLLSRTGAAGPCLMTGADFVTGYDGIRANVSAALADPAVRAIVLDIDSPG
HHHHHHHHHHHHEECCCCCCCEEECCCHHHCCCCCHHHCHHHHHCCCCEEEEEEEECCCC
GEIAGLLDLADAIYAARRRKPLLAVCNECAFSAAYCLASACEQVTVPRTGGTGGVGVLVV
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEE
HVDFSKALTDAGIAVTLITSGEHKADGNEYRPLSRDAYRRIKADVDATAKMLIAMVAHNR
EEEHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCC
GLSQAQVRDTEGATYLGAAGVRAGLADAVMSPDEALLSLLRELDRPRALSSHQEARGHQS
CCCHHHHCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHH
SRRQQRRSWGELAYRAEVKAALR
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPGYQHLATRLLNTPLAIEQGRFAAFAATTCATPRIAAIGSRVGDDIAQAGSRPPYAMV
CCCHHHHHHHHHCCCCEECCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
AGIAVIQVQGMLLSRTGAAGPCLMTGADFVTGYDGIRANVSAALADPAVRAIVLDIDSPG
HHHHHHHHHHHHEECCCCCCCEEECCCHHHCCCCCHHHCHHHHHCCCCEEEEEEEECCCC
GEIAGLLDLADAIYAARRRKPLLAVCNECAFSAAYCLASACEQVTVPRTGGTGGVGVLVV
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEE
HVDFSKALTDAGIAVTLITSGEHKADGNEYRPLSRDAYRRIKADVDATAKMLIAMVAHNR
EEEHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCC
GLSQAQVRDTEGATYLGAAGVRAGLADAVMSPDEALLSLLRELDRPRALSSHQEARGHQS
CCCHHHHCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHH
SRRQQRRSWGELAYRAEVKAALR
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 10455123 [H]