| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782167
Identifier: 91782167
GI number: 91782167
Start: 881508
End: 882734
Strand: Reverse
Name: 91782167
Synonym: Bxe_A3668
Alternate gene names: NA
Gene position: 882734-881508 (Counterclockwise)
Preceding gene: 91782168
Following gene: 91782166
Centisome position: 18.03
GC content: 52.24
Gene sequence:
>1227_bases GTGTTGGTGGGAGCAAACGGGAGCGGAAAGACGTCGTTGCTGAAGGGGATAGCCGAGCTGTTCAATGGATTTGTAGGTGG TGTTAGCTCGAAAAGCATTGCTCCAACGCTGACGGCTGACTCCGTCCGGGTCGAACGCATCGACATTCAAGGCAGACTGA GATTTGAGGAGCAGTATCCAGTATCGGTTCTTGCCGAAGGAAGCATCGGCGATAAAAGACTGTCGTGGGGTGTCACCCGC GAAGCGCCTACCGGAAACTTTACGTACCTTGGCGGACAACCAGGTGATGTATGGAAGACAGCAAGTGACAAAGGCGTAAA CACTGCTCTCGCAAAAAAACTCCCTATCCTCGCGTTCTACCAGGCAAATCGCCAATGGAATTTGAACCGGGCAAGTGAGC TTGAGGCTGCAACGAGCAAAGACGGTCGTATGAACGCTTATAACAATTTTTTCAATGCGTCTAGCGATGCTGCCTCTTTG CAAACCTGGGTCATATCTAAATGCCTGGAGCGCTTTCAAGTTTCCTCGGAAACAAACAGACTGTTCGACGAGGTAACTGA CGACGAGCTTGCTTTAGTTAACGGTGCGCTCGCCAACGCGATCGGGGAAATTCAAGGTATCAAATTTGATATGCGGGAGA AAAGCCTGCTTGTCGAATGGAAGCAGTCCGCTGGTTCAAGCCGCTCAGCTACCGTTTTTGGAAATCTAAGCGATGGGCAA AAAGCGGTCGTGGGGTTGATCGTAGACATTGCACGACGCATCTGCCTCCTAAATCCTCAGTTGGGGCAATCAGCCATTAA GGAGACGCCGGGAATTGTCCTCATCGATGAACTCGACATGCATCTCCATCCCAAGTGGCAACGAGCACTTACCTTGGGCT TGCAGTCCGCATTCCCCTCCGTTCAATTCATCGTTGCGAGCCATTCGCCGCAAATTTTAGGAGAGATGAAGCCAGAGCAG ATTATCGTGCTAACCGGAGGAACGACCTCCAATCCTCAGGTCAGCTACGGACTCGACTCGAGCGCGGTACTTGAAGAAAT TATGGACGTCCCCGCTCGTCCGTTAGAAGTCGCCAATGAACTGTCGGCACTATTCGAAGCTTTAGAGCGAAATGAACTGA ATGTTGCGCGCCAACACCTCGCCAAATTGCGTGCTGGCGCGCCGGGCATTGTCGAACTGAACCGCGCCGAGGCCCTTCTC AAGAGAAAGGAGGTGCTTGGCCGATGA
Upstream 100 bases:
>100_bases ACAGGCGCAAACCGGAATTCCTATGAAAATCGACAAAGTACGGCTGACTAACTATCGCTGCCATCGCGACATCGCTGTTA GTTTTTCGCCGCATTTTAAT
Downstream 100 bases:
>100_bases GATATGTTGTAAAAAACCAAGAACCTGAATCGTTCGCGGCCTGGAAAAAATTAGCAAATAGGGACTGGAAGCCTAGCTAT CAGGACCTTATGAATCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; SMC Domain Protein; AAA ATPase; Antigen PgaA; RecF/RecN/SMC N Terminal Domain; PgaA Protein; RecF/RecN/SMC Family Protein
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MLVGANGSGKTSLLKGIAELFNGFVGGVSSKSIAPTLTADSVRVERIDIQGRLRFEEQYPVSVLAEGSIGDKRLSWGVTR EAPTGNFTYLGGQPGDVWKTASDKGVNTALAKKLPILAFYQANRQWNLNRASELEAATSKDGRMNAYNNFFNASSDAASL QTWVISKCLERFQVSSETNRLFDEVTDDELALVNGALANAIGEIQGIKFDMREKSLLVEWKQSAGSSRSATVFGNLSDGQ KAVVGLIVDIARRICLLNPQLGQSAIKETPGIVLIDELDMHLHPKWQRALTLGLQSAFPSVQFIVASHSPQILGEMKPEQ IIVLTGGTTSNPQVSYGLDSSAVLEEIMDVPARPLEVANELSALFEALERNELNVARQHLAKLRAGAPGIVELNRAEALL KRKEVLGR
Sequences:
>Translated_408_residues MLVGANGSGKTSLLKGIAELFNGFVGGVSSKSIAPTLTADSVRVERIDIQGRLRFEEQYPVSVLAEGSIGDKRLSWGVTR EAPTGNFTYLGGQPGDVWKTASDKGVNTALAKKLPILAFYQANRQWNLNRASELEAATSKDGRMNAYNNFFNASSDAASL QTWVISKCLERFQVSSETNRLFDEVTDDELALVNGALANAIGEIQGIKFDMREKSLLVEWKQSAGSSRSATVFGNLSDGQ KAVVGLIVDIARRICLLNPQLGQSAIKETPGIVLIDELDMHLHPKWQRALTLGLQSAFPSVQFIVASHSPQILGEMKPEQ IIVLTGGTTSNPQVSYGLDSSAVLEEIMDVPARPLEVANELSALFEALERNELNVARQHLAKLRAGAPGIVELNRAEALL KRKEVLGR >Mature_408_residues MLVGANGSGKTSLLKGIAELFNGFVGGVSSKSIAPTLTADSVRVERIDIQGRLRFEEQYPVSVLAEGSIGDKRLSWGVTR EAPTGNFTYLGGQPGDVWKTASDKGVNTALAKKLPILAFYQANRQWNLNRASELEAATSKDGRMNAYNNFFNASSDAASL QTWVISKCLERFQVSSETNRLFDEVTDDELALVNGALANAIGEIQGIKFDMREKSLLVEWKQSAGSSRSATVFGNLSDGQ KAVVGLIVDIARRICLLNPQLGQSAIKETPGIVLIDELDMHLHPKWQRALTLGLQSAFPSVQFIVASHSPQILGEMKPEQ IIVLTGGTTSNPQVSYGLDSSAVLEEIMDVPARPLEVANELSALFEALERNELNVARQHLAKLRAGAPGIVELNRAEALL KRKEVLGR
Specific function: Unknown
COG id: COG3950
COG function: function code R; Predicted ATP-binding protein involved in virulence
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44228; Mature: 44228
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00847 MCM_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGANGSGKTSLLKGIAELFNGFVGGVSSKSIAPTLTADSVRVERIDIQGRLRFEEQYP CEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEEECEEEEECCCCC VSVLAEGSIGDKRLSWGVTREAPTGNFTYLGGQPGDVWKTASDKGVNTALAKKLPILAFY EEEEECCCCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCEEEEE QANRQWNLNRASELEAATSKDGRMNAYNNFFNASSDAASLQTWVISKCLERFQVSSETNR ECCCCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH LFDEVTDDELALVNGALANAIGEIQGIKFDMREKSLLVEWKQSAGSSRSATVFGNLSDGQ HHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCH KAVVGLIVDIARRICLLNPQLGQSAIKETPGIVLIDELDMHLHPKWQRALTLGLQSAFPS HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC VQFIVASHSPQILGEMKPEQIIVLTGGTTSNPQVSYGLDSSAVLEEIMDVPARPLEVANE EEEEEECCCCHHHHCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHH LSALFEALERNELNVARQHLAKLRAGAPGIVELNRAEALLKRKEVLGR HHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC >Mature Secondary Structure MLVGANGSGKTSLLKGIAELFNGFVGGVSSKSIAPTLTADSVRVERIDIQGRLRFEEQYP CEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEEECEEEEECCCCC VSVLAEGSIGDKRLSWGVTREAPTGNFTYLGGQPGDVWKTASDKGVNTALAKKLPILAFY EEEEECCCCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCEEEEE QANRQWNLNRASELEAATSKDGRMNAYNNFFNASSDAASLQTWVISKCLERFQVSSETNR ECCCCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH LFDEVTDDELALVNGALANAIGEIQGIKFDMREKSLLVEWKQSAGSSRSATVFGNLSDGQ HHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCH KAVVGLIVDIARRICLLNPQLGQSAIKETPGIVLIDELDMHLHPKWQRALTLGLQSAFPS HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC VQFIVASHSPQILGEMKPEQIIVLTGGTTSNPQVSYGLDSSAVLEEIMDVPARPLEVANE EEEEEECCCCHHHHCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHH LSALFEALERNELNVARQHLAKLRAGAPGIVELNRAEALLKRKEVLGR HHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA