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The map label for this gene is rbsC [H]

Identifier: 91782161

GI number: 91782161

Start: 876123

End: 877136

Strand: Direct

Name: rbsC [H]

Synonym: Bxe_A3674

Alternate gene names: 91782161

Gene position: 876123-877136 (Clockwise)

Preceding gene: 91782160

Following gene: 91782162

Centisome position: 17.9

GC content: 64.0

Gene sequence:

>1014_bases
ATGCGACCGGCACCCACTGAAGCCGTTCAATCCGGCCGCGCGTTGCGCTTCGCGCATCGGCTGTATGCGCTCGGTCCGCT
GGTTGGACTGATCGCGCTGTGCATTGTCGGCACGCTGCTCAACCGCGATTTCGCCACCGTCGACAACATGATGAACGTGC
TTACGCGCACGTCGTTCATCGGCATCATCGCGGTCGGCATGACCTTCGTGATCATCTCGGGCGGCATCGATCTCTCGGTC
GGCTCGATGGCGGCGCTGATCGCGGGCAGCATGATCTGGCTGATGAACGGACTCGCGGCGGGCATAGGCGGCCATACATT
CGCGCCTTTGCTGATCCTCACGCTCGGCATCGTGTTCGCGCTCGTGCTCGGTGGGCTGTTCGGCTGCGCGCACGGCTTGC
TGATTACCAAAGGGCGGATCGAGCCGTTCATCGTCACGCTCGGCACGTTGGGCATCTTTCGCGCGGTGCTGACCTGGCTT
GCCGACGGCGGCGCGCTGACTCTGGATAACTCGCTGTCCGACCTGTACGGCCCGGTCTATTACGCGAGCCTGTTCGGCGT
GCCAGTGCCGATCTGGGTGTTTCTGGTGGTCGCGGCGGGCGGCGCGCTGATTCTCAACCGCACGGCGTTCGGCCGCCATG
TGCAGGCGATCGGGTCGAATGAACAGGTCGCGCGCTACGCGGCGATTCGCGTGGATACCGTAAAGATCGTCACCTACGTG
CTGCTCGGCATTTGCGTGGGCGTTGCCACGGTGTTGTATGTGCCGCGGCTCGGATCCGCCACGCCGACGACCGGTTTGCT
GTGGGAGCTCGAAGCGATCGCGTCGGTAGTGGTCGGCGGCACGGCGCTCAAGGGCGGCGAAGGCCGCGTGATCGGCACGG
TGATCGGCGCGATCCTGCTGTCGGTGATCGCGAACATTCTGAATCTGACCAGCATCATCAGCGTGTATCTGAACGCGGCG
GTGCAGGGCGTGGTGATTATCTTCGTCGCGTTCGTTCAACGTGGACGGCGGTAG

Upstream 100 bases:

>100_bases
GAGCTGATCGGCTTGTGCCACCGCGTCGCCGTGATGCGGGCGGGACGCCTGCCAGCCACGCTGACGCTCGAGCATCTGAC
CGAAGAGGAGTTGATCGCCC

Downstream 100 bases:

>100_bases
CGGTAGTGCTTCGGTAGTGCTTCAGATTGCGCTTCAAACTGCAATAACGGTGAATTGAGATCGGGGCGCACGAACGCCTC
ACACAAGGAGACATAACCAT

Product: ABC sugar transporter, inner membrane subunit

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRPAPTEAVQSGRALRFAHRLYALGPLVGLIALCIVGTLLNRDFATVDNMMNVLTRTSFIGIIAVGMTFVIISGGIDLSV
GSMAALIAGSMIWLMNGLAAGIGGHTFAPLLILTLGIVFALVLGGLFGCAHGLLITKGRIEPFIVTLGTLGIFRAVLTWL
ADGGALTLDNSLSDLYGPVYYASLFGVPVPIWVFLVVAAGGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYV
LLGICVGVATVLYVPRLGSATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANILNLTSIISVYLNAA
VQGVVIIFVAFVQRGRR

Sequences:

>Translated_337_residues
MRPAPTEAVQSGRALRFAHRLYALGPLVGLIALCIVGTLLNRDFATVDNMMNVLTRTSFIGIIAVGMTFVIISGGIDLSV
GSMAALIAGSMIWLMNGLAAGIGGHTFAPLLILTLGIVFALVLGGLFGCAHGLLITKGRIEPFIVTLGTLGIFRAVLTWL
ADGGALTLDNSLSDLYGPVYYASLFGVPVPIWVFLVVAAGGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYV
LLGICVGVATVLYVPRLGSATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANILNLTSIISVYLNAA
VQGVVIIFVAFVQRGRR
>Mature_337_residues
MRPAPTEAVQSGRALRFAHRLYALGPLVGLIALCIVGTLLNRDFATVDNMMNVLTRTSFIGIIAVGMTFVIISGGIDLSV
GSMAALIAGSMIWLMNGLAAGIGGHTFAPLLILTLGIVFALVLGGLFGCAHGLLITKGRIEPFIVTLGTLGIFRAVLTWL
ADGGALTLDNSLSDLYGPVYYASLFGVPVPIWVFLVVAAGGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYV
LLGICVGVATVLYVPRLGSATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSVIANILNLTSIISVYLNAA
VQGVVIIFVAFVQRGRR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=333, Percent_Identity=35.1351351351351, Blast_Score=167, Evalue=9e-43,
Organism=Escherichia coli, GI145693152, Length=342, Percent_Identity=32.4561403508772, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1790524, Length=300, Percent_Identity=33, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI87082395, Length=302, Percent_Identity=34.7682119205298, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1788896, Length=311, Percent_Identity=32.1543408360129, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787793, Length=292, Percent_Identity=30.8219178082192, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI145693214, Length=252, Percent_Identity=30.952380952381, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789992, Length=138, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787794, Length=288, Percent_Identity=30.5555555555556, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1788471, Length=230, Percent_Identity=28.2608695652174, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35082; Mature: 35082

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAPTEAVQSGRALRFAHRLYALGPLVGLIALCIVGTLLNRDFATVDNMMNVLTRTSFI
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GIIAVGMTFVIISGGIDLSVGSMAALIAGSMIWLMNGLAAGIGGHTFAPLLILTLGIVFA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LVLGGLFGCAHGLLITKGRIEPFIVTLGTLGIFRAVLTWLADGGALTLDNSLSDLYGPVY
HHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHH
YASLFGVPVPIWVFLVVAAGGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYV
HHHHHCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LLGICVGVATVLYVPRLGSATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH
SVIANILNLTSIISVYLNAAVQGVVIIFVAFVQRGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPAPTEAVQSGRALRFAHRLYALGPLVGLIALCIVGTLLNRDFATVDNMMNVLTRTSFI
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GIIAVGMTFVIISGGIDLSVGSMAALIAGSMIWLMNGLAAGIGGHTFAPLLILTLGIVFA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LVLGGLFGCAHGLLITKGRIEPFIVTLGTLGIFRAVLTWLADGGALTLDNSLSDLYGPVY
HHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHH
YASLFGVPVPIWVFLVVAAGGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYV
HHHHHCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LLGICVGVATVLYVPRLGSATPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH
SVIANILNLTSIISVYLNAAVQGVVIIFVAFVQRGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]