| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91782146
Identifier: 91782146
GI number: 91782146
Start: 858508
End: 860196
Strand: Reverse
Name: 91782146
Synonym: Bxe_A3689
Alternate gene names: NA
Gene position: 860196-858508 (Counterclockwise)
Preceding gene: 91782147
Following gene: 91782145
Centisome position: 17.57
GC content: 59.21
Gene sequence:
>1689_bases ATGCGTTTCGTATACCCCGTCCTCCTCATGATCGTTTGTGGCGCGTGTTCGCAGCACGATAATCACTTCGCTATTTCTTC AGGAGATCGCGGTGTCGACAACGCAGTGATCGCCTGGAGAGATCAGTTTGATCCGCTGTGGCAATATCGCCGCACAACGT GCAGCACCAGGGCCGACGCGTTCTCTGACTTGAAAGGTCTGGTTCGGCAGCTTCTGCATGTGTCGACAGCAACTGCCTGT GACCGTCTAACGCTGTTGCCGGAAACCTACTATGCACACGTCGACGGCAATCAGGCTAGCGTGGTCGTGCAAAACGCCAA TGGGCGACCTGGGAGCCAGGTCCGTTTTATTCTCGCTTCCTCGGCCGGCGGCTGGAAGGTGCGGGAAGTGTCGGCGGCAA GCGCCCAGTCTGCGGTGACTATCTTCGATGGGGCGCACGCAGGTTCCAGTGATGGGCGCGTCGAGCCGGCCTATTCGGCC TGGATTCCTCACGGCGCCGCGCCCTGGCAGATCACGCACGTTATTACCTATGGTCAATCGCTTAGTCAGGGGTTTTTTAA TAAACCTGTTCTGTCCGTTGGACAGCGTTATTCGTCGTTGCGATTCAGCGGCGGTGTGCGGACTCAGGACGGCGTGCAAA GCGACGGCGAAGACGCGGCGTACCGGCAGTTCGTACCGCTAATCGAGACCCAATGGGGTGACAAGGCCGAGACGCCAACC AGCGGGACGCTGAATATGGCCATGCAGTTGATCGAACAGGAAAACCTGCAAAACCATATGAAGCTCCCCTACCGGTTCGT CGGGTCGGCACCGGGCGAGGGCTCGATGGATATCGCGACGCTGTCGCCACCGGGCCGCTATTACACGCGGCTGCTGCGCG ATATCGCCCAGGGAAAGCGGCTCGCAGACGCTCAGGGCAAGACATATGGCGTCGGCGCGATCACATGGACTCAAGGGGAA GCCGATGATTCCATCAATACACCTGTTCCGGCTTATATCGCCAGGCTGAAAACGCTGCGGGCCGACGTCGATCGGGATGC AAAGGCGCTCACGGGACAGAAGCAGGACGTGGAGATGATCACGTATCAAGTGGCCACGAATCGCCATTTCGATCAGCCGT ATCCGCATATCGCGCTTGCGCTTCTACAGGCGAGCCACGAAGATCCGCACATTCATCTGGCCGTGCCAATGTATCTCTTT CGGTATGTGGACGGCGGACATACCGATAATCGCAGCACGGAATGGATGGGCGCCTATTACGGACTGGTCCTGAAGAGGAT TCTGATCGACCAGGAAACGTGGAAGCCGCTCGAACCGCTGGCCTGGCAGCGCGCGGGCGCTACGGCCACGCTGCGCTTCA ATGTTCCCGCCCCGCCTCTCAAATGGGATACGACGCAGGTTGCGGGCAACTCGGACTACGGTTTTTCACTGCGTCTGCCA TCCGGCACCTTGCTGCCGATCCGGTCAGTGTCGATCACCGCCCCCGACGAAGTGCGAATTACCGCCCAGTCGCCTATCCC TGCCGGTACGCACGTCGAATATGCATTCAATGGTGTCGGCGTCGCAGGCAGCCGTTATGGTCCGCGTGGCAATCTGCGGG ATTCGCAAGGCGACGCGATCCGCTTCAACGATGGACGCGAATCGATGCGTCTCGACAACTGGTGCGTGATTTTCGACGTG CAGCTTTAG
Upstream 100 bases:
>100_bases CCGTGTCGTCCGTCCAGACTCTTGCGTGCGAGGTCGCACATAAGGTATGTGGTGATTCCCCTTACAATCGTCCGCGCAGA TGAACGCTAAGGATCACTCA
Downstream 100 bases:
>100_bases CACTTCGTGAAGAGCCGGCCGCATCGCATGGAAACAGGAACCGGGACGAGGCAATGGTGAAAGAAGAGCGCATCAGAGGC GGTCAGGCTGTCTCCATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MRFVYPVLLMIVCGACSQHDNHFAISSGDRGVDNAVIAWRDQFDPLWQYRRTTCSTRADAFSDLKGLVRQLLHVSTATAC DRLTLLPETYYAHVDGNQASVVVQNANGRPGSQVRFILASSAGGWKVREVSAASAQSAVTIFDGAHAGSSDGRVEPAYSA WIPHGAAPWQITHVITYGQSLSQGFFNKPVLSVGQRYSSLRFSGGVRTQDGVQSDGEDAAYRQFVPLIETQWGDKAETPT SGTLNMAMQLIEQENLQNHMKLPYRFVGSAPGEGSMDIATLSPPGRYYTRLLRDIAQGKRLADAQGKTYGVGAITWTQGE ADDSINTPVPAYIARLKTLRADVDRDAKALTGQKQDVEMITYQVATNRHFDQPYPHIALALLQASHEDPHIHLAVPMYLF RYVDGGHTDNRSTEWMGAYYGLVLKRILIDQETWKPLEPLAWQRAGATATLRFNVPAPPLKWDTTQVAGNSDYGFSLRLP SGTLLPIRSVSITAPDEVRITAQSPIPAGTHVEYAFNGVGVAGSRYGPRGNLRDSQGDAIRFNDGRESMRLDNWCVIFDV QL
Sequences:
>Translated_562_residues MRFVYPVLLMIVCGACSQHDNHFAISSGDRGVDNAVIAWRDQFDPLWQYRRTTCSTRADAFSDLKGLVRQLLHVSTATAC DRLTLLPETYYAHVDGNQASVVVQNANGRPGSQVRFILASSAGGWKVREVSAASAQSAVTIFDGAHAGSSDGRVEPAYSA WIPHGAAPWQITHVITYGQSLSQGFFNKPVLSVGQRYSSLRFSGGVRTQDGVQSDGEDAAYRQFVPLIETQWGDKAETPT SGTLNMAMQLIEQENLQNHMKLPYRFVGSAPGEGSMDIATLSPPGRYYTRLLRDIAQGKRLADAQGKTYGVGAITWTQGE ADDSINTPVPAYIARLKTLRADVDRDAKALTGQKQDVEMITYQVATNRHFDQPYPHIALALLQASHEDPHIHLAVPMYLF RYVDGGHTDNRSTEWMGAYYGLVLKRILIDQETWKPLEPLAWQRAGATATLRFNVPAPPLKWDTTQVAGNSDYGFSLRLP SGTLLPIRSVSITAPDEVRITAQSPIPAGTHVEYAFNGVGVAGSRYGPRGNLRDSQGDAIRFNDGRESMRLDNWCVIFDV QL >Mature_562_residues MRFVYPVLLMIVCGACSQHDNHFAISSGDRGVDNAVIAWRDQFDPLWQYRRTTCSTRADAFSDLKGLVRQLLHVSTATAC DRLTLLPETYYAHVDGNQASVVVQNANGRPGSQVRFILASSAGGWKVREVSAASAQSAVTIFDGAHAGSSDGRVEPAYSA WIPHGAAPWQITHVITYGQSLSQGFFNKPVLSVGQRYSSLRFSGGVRTQDGVQSDGEDAAYRQFVPLIETQWGDKAETPT SGTLNMAMQLIEQENLQNHMKLPYRFVGSAPGEGSMDIATLSPPGRYYTRLLRDIAQGKRLADAQGKTYGVGAITWTQGE ADDSINTPVPAYIARLKTLRADVDRDAKALTGQKQDVEMITYQVATNRHFDQPYPHIALALLQASHEDPHIHLAVPMYLF RYVDGGHTDNRSTEWMGAYYGLVLKRILIDQETWKPLEPLAWQRAGATATLRFNVPAPPLKWDTTQVAGNSDYGFSLRLP SGTLLPIRSVSITAPDEVRITAQSPIPAGTHVEYAFNGVGVAGSRYGPRGNLRDSQGDAIRFNDGRESMRLDNWCVIFDV QL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61835; Mature: 61835
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVYPVLLMIVCGACSQHDNHFAISSGDRGVDNAVIAWRDQFDPLWQYRRTTCSTRADA CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH FSDLKGLVRQLLHVSTATACDRLTLLPETYYAHVDGNQASVVVQNANGRPGSQVRFILAS HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEE SAGGWKVREVSAASAQSAVTIFDGAHAGSSDGRVEPAYSAWIPHGAAPWQITHVITYGQS CCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCH LSQGFFNKPVLSVGQRYSSLRFSGGVRTQDGVQSDGEDAAYRQFVPLIETQWGDKAETPT HHHCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC SGTLNMAMQLIEQENLQNHMKLPYRFVGSAPGEGSMDIATLSPPGRYYTRLLRDIAQGKR CCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCE LADAQGKTYGVGAITWTQGEADDSINTPVPAYIARLKTLRADVDRDAKALTGQKQDVEMI ECCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEE TYQVATNRHFDQPYPHIALALLQASHEDPHIHLAVPMYLFRYVDGGHTDNRSTEWMGAYY EEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHH GLVLKRILIDQETWKPLEPLAWQRAGATATLRFNVPAPPLKWDTTQVAGNSDYGFSLRLP HHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEEEECC SGTLLPIRSVSITAPDEVRITAQSPIPAGTHVEYAFNGVGVAGSRYGPRGNLRDSQGDAI CCCEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE RFNDGRESMRLDNWCVIFDVQL EECCCCCCCEECCEEEEEEECC >Mature Secondary Structure MRFVYPVLLMIVCGACSQHDNHFAISSGDRGVDNAVIAWRDQFDPLWQYRRTTCSTRADA CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH FSDLKGLVRQLLHVSTATACDRLTLLPETYYAHVDGNQASVVVQNANGRPGSQVRFILAS HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEE SAGGWKVREVSAASAQSAVTIFDGAHAGSSDGRVEPAYSAWIPHGAAPWQITHVITYGQS CCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCH LSQGFFNKPVLSVGQRYSSLRFSGGVRTQDGVQSDGEDAAYRQFVPLIETQWGDKAETPT HHHCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC SGTLNMAMQLIEQENLQNHMKLPYRFVGSAPGEGSMDIATLSPPGRYYTRLLRDIAQGKR CCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCE LADAQGKTYGVGAITWTQGEADDSINTPVPAYIARLKTLRADVDRDAKALTGQKQDVEMI ECCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEE TYQVATNRHFDQPYPHIALALLQASHEDPHIHLAVPMYLFRYVDGGHTDNRSTEWMGAYY EEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHH GLVLKRILIDQETWKPLEPLAWQRAGATATLRFNVPAPPLKWDTTQVAGNSDYGFSLRLP HHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEEEECC SGTLLPIRSVSITAPDEVRITAQSPIPAGTHVEYAFNGVGVAGSRYGPRGNLRDSQGDAI CCCEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE RFNDGRESMRLDNWCVIFDVQL EECCCCCCCEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA