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The map label for this gene is rfaC [H]

Identifier: 91782135

GI number: 91782135

Start: 848363

End: 849364

Strand: Direct

Name: rfaC [H]

Synonym: Bxe_A3700

Alternate gene names: 91782135

Gene position: 848363-849364 (Clockwise)

Preceding gene: 91782134

Following gene: 91782136

Centisome position: 17.33

GC content: 67.76

Gene sequence:

>1002_bases
TTGAGCGTGCAAAAGATATTGATCGTGAGGGTGTCGTCGTTGGGCGACGTCGTCCACAACATGCCGGTGATCGCCGACAT
CCGGCGCCGCCACCCCGAGGCTCAGATCGACTGGCTCGTCGAAGAGAGCTTCGTGGGGCTGGTGCAACTCGTGAGCGGCG
TGCGCCGGGCGATTCCCGTGTCCCTGCGGCGCTGGCGCAAGCGCATTCTGTCGCTGGACAACTGGCGCGAGATTGGCGCA
TTCCGCCGCGCGCTCGCCGCCGAAAACTACGATCTCGTGATCGACTGCCAGGGACTCATCAAGACCGCATGGGTGGCGAA
CATGGCGCGCGGGCCGCTGGTCGGCCTCGCGAACCGTACCGACGGCGCGGGCTTCGAATGGCCGGTGCGCTTCTTTTACG
ACAGGCGCGTGCCGATCGAGCCGCGCACCCACGTGGTGGAACGTACGCGCCAACTGGTGGCCGCGGCGCTGAACGACCCG
CCGCCGCAACCCACCGACCACATCGACTTCGGCATCGACACCGGGCGGGCCGCGCTGGCTTTGTCCGAGGCGAATCTGAA
CCTGCCGGTGCCGTATGTGGTGTTCGTGCACGCCACCTCGCGCGCCGACAAACAGTGGCCGGACACCGCGTGGATCGAGT
TGGGGCAGTCATTGGTGCGGCGCGGCGCGTCGATCGTGCTGCCGTGGGGCAGTGAGGCGGAACGCGCCACCAGCGAGCGC
CTCGCCAAGGAATTCGGCGCGGCGGCCATCGTGCCGCCGAAGCTCTCGTTGCCGGCCGTGGTCGGGCTGATCGAAGGCGC
GGCCGCGACCGTCGGAGTTGACACAGGTCTGGTTCACATCGCCGCGGCGCTGAAGCGCCCGACCATCGAGTTGTACAATT
TCGCCACCGCGTGGCGCACCGGCGGCTACTGGTCGCCGAACGTCGTCAATCTCGGCACGGCCGGACAGCCGCCCACGCTG
CAACAGGTGAAGTCGGCACTCGCGGGCTTCGGCCTGCTGTAA

Upstream 100 bases:

>100_bases
CCCAGGTTTTTCTCGTCCCTTGCCCGGGGGCCTGGCGCGAAACGACAGGTTCGGGGCTCTCTCAACGCATCTTCGGGCCG
GACAGCCGGTTTTCCCACTC

Downstream 100 bases:

>100_bases
CACGTCCGGGGCGCTTCGCCTTGCGCTCCAACCGTTTTCAAGGGCGATCATGAACGAAACCCAGATCATCGAAGTAGCGA
ACGCCGACTGGCACGGGCGC

Product: putative lipopolysaccharide heptosyltransferase-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSVQKILIVRVSSLGDVVHNMPVIADIRRRHPEAQIDWLVEESFVGLVQLVSGVRRAIPVSLRRWRKRILSLDNWREIGA
FRRALAAENYDLVIDCQGLIKTAWVANMARGPLVGLANRTDGAGFEWPVRFFYDRRVPIEPRTHVVERTRQLVAAALNDP
PPQPTDHIDFGIDTGRAALALSEANLNLPVPYVVFVHATSRADKQWPDTAWIELGQSLVRRGASIVLPWGSEAERATSER
LAKEFGAAAIVPPKLSLPAVVGLIEGAAATVGVDTGLVHIAAALKRPTIELYNFATAWRTGGYWSPNVVNLGTAGQPPTL
QQVKSALAGFGLL

Sequences:

>Translated_333_residues
MSVQKILIVRVSSLGDVVHNMPVIADIRRRHPEAQIDWLVEESFVGLVQLVSGVRRAIPVSLRRWRKRILSLDNWREIGA
FRRALAAENYDLVIDCQGLIKTAWVANMARGPLVGLANRTDGAGFEWPVRFFYDRRVPIEPRTHVVERTRQLVAAALNDP
PPQPTDHIDFGIDTGRAALALSEANLNLPVPYVVFVHATSRADKQWPDTAWIELGQSLVRRGASIVLPWGSEAERATSER
LAKEFGAAAIVPPKLSLPAVVGLIEGAAATVGVDTGLVHIAAALKRPTIELYNFATAWRTGGYWSPNVVNLGTAGQPPTL
QQVKSALAGFGLL
>Mature_332_residues
SVQKILIVRVSSLGDVVHNMPVIADIRRRHPEAQIDWLVEESFVGLVQLVSGVRRAIPVSLRRWRKRILSLDNWREIGAF
RRALAAENYDLVIDCQGLIKTAWVANMARGPLVGLANRTDGAGFEWPVRFFYDRRVPIEPRTHVVERTRQLVAAALNDPP
PQPTDHIDFGIDTGRAALALSEANLNLPVPYVVFVHATSRADKQWPDTAWIELGQSLVRRGASIVLPWGSEAERATSERL
AKEFGAAAIVPPKLSLPAVVGLIEGAAATVGVDTGLVHIAAALKRPTIELYNFATAWRTGGYWSPNVVNLGTAGQPPTLQ
QVKSALAGFGLL

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=309, Percent_Identity=41.1003236245955, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1790050, Length=299, Percent_Identity=25.4180602006689, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36454; Mature: 36323

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQKILIVRVSSLGDVVHNMPVIADIRRRHPEAQIDWLVEESFVGLVQLVSGVRRAIPV
CCCHHEEEEEHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
SLRRWRKRILSLDNWREIGAFRRALAAENYDLVIDCQGLIKTAWVANMARGPLVGLANRT
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCEEEECCCC
DGAGFEWPVRFFYDRRVPIEPRTHVVERTRQLVAAALNDPPPQPTDHIDFGIDTGRAALA
CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
LSEANLNLPVPYVVFVHATSRADKQWPDTAWIELGQSLVRRGASIVLPWGSEAERATSER
EECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
LAKEFGAAAIVPPKLSLPAVVGLIEGAAATVGVDTGLVHIAAALKRPTIELYNFATAWRT
HHHHHCCEEECCCCCCHHHHHHHHHCCHHEEECHHHHHHHHHHHCCCCHHHHHHHHHHCC
GGYWSPNVVNLGTAGQPPTLQQVKSALAGFGLL
CCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVQKILIVRVSSLGDVVHNMPVIADIRRRHPEAQIDWLVEESFVGLVQLVSGVRRAIPV
CCHHEEEEEHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
SLRRWRKRILSLDNWREIGAFRRALAAENYDLVIDCQGLIKTAWVANMARGPLVGLANRT
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCEEEECCCC
DGAGFEWPVRFFYDRRVPIEPRTHVVERTRQLVAAALNDPPPQPTDHIDFGIDTGRAALA
CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
LSEANLNLPVPYVVFVHATSRADKQWPDTAWIELGQSLVRRGASIVLPWGSEAERATSER
EECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
LAKEFGAAAIVPPKLSLPAVVGLIEGAAATVGVDTGLVHIAAALKRPTIELYNFATAWRT
HHHHHCCEEECCCCCCHHHHHHHHHCCHHEEECHHHHHHHHHHHCCCCHHHHHHHHHHCC
GGYWSPNVVNLGTAGQPPTLQQVKSALAGFGLL
CCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478319; 8041620; 9278503; 1624462 [H]