| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782133
Identifier: 91782133
GI number: 91782133
Start: 845159
End: 846421
Strand: Reverse
Name: 91782133
Synonym: Bxe_A3702
Alternate gene names: NA
Gene position: 846421-845159 (Counterclockwise)
Preceding gene: 91782138
Following gene: 91782132
Centisome position: 17.29
GC content: 65.8
Gene sequence:
>1263_bases ATGCTGACGCTCAAACGCTTCGCCAATCCGGACGTCACGCGCGCCTTCACGAATATCGTGTGGCTCGGGCTGGAGCGGCT CACGCAGATCGGCGTGGCGATCGCGATCAGCGGCATGCTGGCGCGCTACTTCGGGCCGGACATCTTCGGCAAATGGCAGT ACGCCAACACGCTGCTGCTGGTGCTCTCGCCCATCACCTGGGTGTGCGGCGCGGAGATCCTCGTGCCCACCATCGTCAAC CGGCCGCCGGCGCAACTCGGCACCGTGCTCGGCAGCGCCTTCGCGCTGCGCATTTCGGTGTCGGCCGCGGCCCTGTTGCT CACATGGCTCGGCATTGCCCTGCACTTCTTCGAGCCGCTGGTCGGCGCCATGCTCGCCGGCCTCGCCGTGACCATGCTGT TTCGCGAGCCGTTCGTCGGCGTGATCAACGCGTGGCTGCAAAGCATGACCTACAGCAAGCCGCAGTTGCTGACCAGCATG AGCACCGCGGTACTGAAGGCCGCTCTTGTCTATCTGCTCGTGCGCGCGGCGGCCACGCCCGCGCGCTTCGGCTGGCTGTG GGCGCTCGAATCGGCGGCGATTGGCGCCGTGCTCGTGATCTACTACATCGGCCGGCATGGCGGCAAGCTCGGCTGGCATC TCGACCGGGCGCTCTTCAGGCATTTCGCGAGCGCGGGCACCGTGTTCTGGCTCGGCCTGATCTGTATGTACCTGTTCCTG AAGCTGGATCGGCTCATGCTCGAACGGGCCATTTCGTTCGCCGACCTCGGGCGCTATTCCGCCGCCCAGCAGTTGAACGA AAACTGGATCACGCTCGCGCTGATGCTCGCGCAGACCATCGCGCCCGCCTTCGTCTACCGCGTGCAGGACGCTGCCCAGC TACGCCGCAACATGTGGCGGCTCACCGCCATGACCGCGGCGCTGATGGTGGGCGGCGCGATCGTGCTGGACCTGCTGGCC GGCCTGATCATCCGCAGCGTGTTCGGGCCGCAGTTCGAAGGCGCGATCGGGATTTTCCGTTGGGCCGTGTGGCTCTCCGT GCCGGCCGGCATCGAGGCGATCGGCAATCTGATCGTGCTCAAGTATCAGGCCAAATTCGTGTTGCTCTCCAAGTGGCTGC TCGCGCTGGCCGTCGCGTTCGTGGTCAATCTGCTGGCGATTCCGCGGCTCGGCGCTTACGGCGCGCTGGCGGGCCTCGCG GCCGGCTATCTGGCGGCGGCGTCGGTCAATCTTTATTACATCCGTTTCAAATTGCGCCCATGA
Upstream 100 bases:
>100_bases TGCGCACCGCGCCGCTCGGGGCGTTCGGGCCGCGCGTGCTATCGGCGCCGTCGGCACAAGCGGCGCAAGCGGCGCAAGCG GACCGCCGGGCCTCCACCGG
Downstream 100 bases:
>100_bases CGAACTCACCCGCCACCGCGCACATGACCCTCGACGACGTCGCGGTGCTGATACCCGCCTACAACGGCCAGGCCGACGTC GACCTCACGCTCGCGTCGTT
Product: polysaccharide exporter, PST family
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis Protein; O-Antigen Export Protein; Oligosaccharide Translocase; PST Family Polysaccharide Export Protein; Lipopolysaccharide/O-Antigen Transporter
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MLTLKRFANPDVTRAFTNIVWLGLERLTQIGVAIAISGMLARYFGPDIFGKWQYANTLLLVLSPITWVCGAEILVPTIVN RPPAQLGTVLGSAFALRISVSAAALLLTWLGIALHFFEPLVGAMLAGLAVTMLFREPFVGVINAWLQSMTYSKPQLLTSM STAVLKAALVYLLVRAAATPARFGWLWALESAAIGAVLVIYYIGRHGGKLGWHLDRALFRHFASAGTVFWLGLICMYLFL KLDRLMLERAISFADLGRYSAAQQLNENWITLALMLAQTIAPAFVYRVQDAAQLRRNMWRLTAMTAALMVGGAIVLDLLA GLIIRSVFGPQFEGAIGIFRWAVWLSVPAGIEAIGNLIVLKYQAKFVLLSKWLLALAVAFVVNLLAIPRLGAYGALAGLA AGYLAAASVNLYYIRFKLRP
Sequences:
>Translated_420_residues MLTLKRFANPDVTRAFTNIVWLGLERLTQIGVAIAISGMLARYFGPDIFGKWQYANTLLLVLSPITWVCGAEILVPTIVN RPPAQLGTVLGSAFALRISVSAAALLLTWLGIALHFFEPLVGAMLAGLAVTMLFREPFVGVINAWLQSMTYSKPQLLTSM STAVLKAALVYLLVRAAATPARFGWLWALESAAIGAVLVIYYIGRHGGKLGWHLDRALFRHFASAGTVFWLGLICMYLFL KLDRLMLERAISFADLGRYSAAQQLNENWITLALMLAQTIAPAFVYRVQDAAQLRRNMWRLTAMTAALMVGGAIVLDLLA GLIIRSVFGPQFEGAIGIFRWAVWLSVPAGIEAIGNLIVLKYQAKFVLLSKWLLALAVAFVVNLLAIPRLGAYGALAGLA AGYLAAASVNLYYIRFKLRP >Mature_420_residues MLTLKRFANPDVTRAFTNIVWLGLERLTQIGVAIAISGMLARYFGPDIFGKWQYANTLLLVLSPITWVCGAEILVPTIVN RPPAQLGTVLGSAFALRISVSAAALLLTWLGIALHFFEPLVGAMLAGLAVTMLFREPFVGVINAWLQSMTYSKPQLLTSM STAVLKAALVYLLVRAAATPARFGWLWALESAAIGAVLVIYYIGRHGGKLGWHLDRALFRHFASAGTVFWLGLICMYLFL KLDRLMLERAISFADLGRYSAAQQLNENWITLALMLAQTIAPAFVYRVQDAAQLRRNMWRLTAMTAALMVGGAIVLDLLA GLIIRSVFGPQFEGAIGIFRWAVWLSVPAGIEAIGNLIVLKYQAKFVLLSKWLLALAVAFVVNLLAIPRLGAYGALAGLA AGYLAAASVNLYYIRFKLRP
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45933; Mature: 45933
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLKRFANPDVTRAFTNIVWLGLERLTQIGVAIAISGMLARYFGPDIFGKWQYANTLLL CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VLSPITWVCGAEILVPTIVNRPPAQLGTVLGSAFALRISVSAAALLLTWLGIALHFFEPL HHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAMLAGLAVTMLFREPFVGVINAWLQSMTYSKPQLLTSMSTAVLKAALVYLLVRAAATP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ARFGWLWALESAAIGAVLVIYYIGRHGGKLGWHLDRALFRHFASAGTVFWLGLICMYLFL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KLDRLMLERAISFADLGRYSAAQQLNENWITLALMLAQTIAPAFVYRVQDAAQLRRNMWR HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAMTAALMVGGAIVLDLLAGLIIRSVFGPQFEGAIGIFRWAVWLSVPAGIEAIGNLIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCEEEE KYQAKFVLLSKWLLALAVAFVVNLLAIPRLGAYGALAGLAAGYLAAASVNLYYIRFKLRP EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECC >Mature Secondary Structure MLTLKRFANPDVTRAFTNIVWLGLERLTQIGVAIAISGMLARYFGPDIFGKWQYANTLLL CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VLSPITWVCGAEILVPTIVNRPPAQLGTVLGSAFALRISVSAAALLLTWLGIALHFFEPL HHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAMLAGLAVTMLFREPFVGVINAWLQSMTYSKPQLLTSMSTAVLKAALVYLLVRAAATP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ARFGWLWALESAAIGAVLVIYYIGRHGGKLGWHLDRALFRHFASAGTVFWLGLICMYLFL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KLDRLMLERAISFADLGRYSAAQQLNENWITLALMLAQTIAPAFVYRVQDAAQLRRNMWR HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAMTAALMVGGAIVLDLLAGLIIRSVFGPQFEGAIGIFRWAVWLSVPAGIEAIGNLIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCEEEE KYQAKFVLLSKWLLALAVAFVVNLLAIPRLGAYGALAGLAAGYLAAASVNLYYIRFKLRP EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA