| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is wcaJ [C]
Identifier: 91782124
GI number: 91782124
Start: 835209
End: 836030
Strand: Reverse
Name: wcaJ [C]
Synonym: Bxe_A3711
Alternate gene names: 91782124
Gene position: 836030-835209 (Counterclockwise)
Preceding gene: 91782125
Following gene: 91782123
Centisome position: 17.08
GC content: 57.06
Gene sequence:
>822_bases ATGGCTTTAGTCGGCAAGGTATCGGAATCAGTATCAGAGGAAGCGACTCCTTTCGATACCCGCTACGAAGGTCGTTCGCA TGCCGACAATCCTGAATTGGGCGGCCGCGGCTTCTTATCTTCGCATATGGACAGCACCTCGGATTTCAACCGCAGTGAAG AGTCCTTTCCCTCGGACACGTCCGCGGCAAACGACCCGGACATCCCCTCCACAAAGGGTGACTTCACAAAACGCGCGCTC GATATTTTCGGCGCGTCTTTCCTGCTCCTCGTGCTGCTGCCGATTTTTCTCGTGCTGGCTTGCATCGTCAAGCGCGATGG GGGGGCGGCCTTCTTTGGACACCCTCGCGTGGGCAAAGGCGGACGCTCGTTTCGTTGTTTGAAATTCCGCTCTATGGTGC CGAAAGCCGATGTCGTTCTCGCCGAACTTCTTGCCACCGACGCCAGTGCGCGCGAGGAATGGAATCGCGATTTCAAGCTG AAGAACGATGTGCGCATCACGGGCGTCGGCCGCTTTTTACGCAAGACGAGCCTCGATGAACTACCTCAACTCTGGAATGT GCTTCGCGGCGACATGAGCCTCGTCGGCCCGCGGCCCATCGTCACCAAGGAACTGGAACGTTATGGCGCCGACGCGCATT ACTACCTGTCGGTCAGGCCTGGTGTAACGGGATTGTGGCAAGTGAGCGGGCGCAATAACGTCGACTACGCGACCAGAGTC GCACTGGACGTCTCTTACGTTAAAGAACGTTCCACCTTGCTCGACATCAGCATTCTGCTAAGAACCTTCAAAGTGGTCTT TGACGGCGGCGGCGCGTATTGA
Upstream 100 bases:
>100_bases TCTGCAAAGCGCCCAGCATTCAGCGGTTGTAATGACCGACACAACCCGCAATGCCGAAACACTCGATGTACCTGTTAACG CACTTCGAATGGGGGCAGCA
Downstream 100 bases:
>100_bases GCAGCCTGCGCTCCGGTCACGGCAATGTAATCCGTATTCTCCATGCCCGCGTCGGCCAGCACACTGGAGCGATAACGTAT GAAACAGTTAGTGGAGCTGG
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MALVGKVSESVSEEATPFDTRYEGRSHADNPELGGRGFLSSHMDSTSDFNRSEESFPSDTSAANDPDIPSTKGDFTKRAL DIFGASFLLLVLLPIFLVLACIVKRDGGAAFFGHPRVGKGGRSFRCLKFRSMVPKADVVLAELLATDASAREEWNRDFKL KNDVRITGVGRFLRKTSLDELPQLWNVLRGDMSLVGPRPIVTKELERYGADAHYYLSVRPGVTGLWQVSGRNNVDYATRV ALDVSYVKERSTLLDISILLRTFKVVFDGGGAY
Sequences:
>Translated_273_residues MALVGKVSESVSEEATPFDTRYEGRSHADNPELGGRGFLSSHMDSTSDFNRSEESFPSDTSAANDPDIPSTKGDFTKRAL DIFGASFLLLVLLPIFLVLACIVKRDGGAAFFGHPRVGKGGRSFRCLKFRSMVPKADVVLAELLATDASAREEWNRDFKL KNDVRITGVGRFLRKTSLDELPQLWNVLRGDMSLVGPRPIVTKELERYGADAHYYLSVRPGVTGLWQVSGRNNVDYATRV ALDVSYVKERSTLLDISILLRTFKVVFDGGGAY >Mature_272_residues ALVGKVSESVSEEATPFDTRYEGRSHADNPELGGRGFLSSHMDSTSDFNRSEESFPSDTSAANDPDIPSTKGDFTKRALD IFGASFLLLVLLPIFLVLACIVKRDGGAAFFGHPRVGKGGRSFRCLKFRSMVPKADVVLAELLATDASAREEWNRDFKLK NDVRITGVGRFLRKTSLDELPQLWNVLRGDMSLVGPRPIVTKELERYGADAHYYLSVRPGVTGLWQVSGRNNVDYATRVA LDVSYVKERSTLLDISILLRTFKVVFDGGGAY
Specific function: May function as a sugar transferase [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=206, Percent_Identity=37.8640776699029, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 30147; Mature: 30015
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVGKVSESVSEEATPFDTRYEGRSHADNPELGGRGFLSSHMDSTSDFNRSEESFPSDT CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCCCC SAANDPDIPSTKGDFTKRALDIFGASFLLLVLLPIFLVLACIVKRDGGAAFFGHPRVGKG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC GRSFRCLKFRSMVPKADVVLAELLATDASAREEWNRDFKLKNDVRITGVGRFLRKTSLDE CCCEEEEHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHCCHHH LPQLWNVLRGDMSLVGPRPIVTKELERYGADAHYYLSVRPGVTGLWQVSGRNNVDYATRV HHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCHHHHH ALDVSYVKERSTLLDISILLRTFKVVFDGGGAY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALVGKVSESVSEEATPFDTRYEGRSHADNPELGGRGFLSSHMDSTSDFNRSEESFPSDT CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCCCC SAANDPDIPSTKGDFTKRALDIFGASFLLLVLLPIFLVLACIVKRDGGAAFFGHPRVGKG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC GRSFRCLKFRSMVPKADVVLAELLATDASAREEWNRDFKLKNDVRITGVGRFLRKTSLDE CCCEEEEHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHCCHHH LPQLWNVLRGDMSLVGPRPIVTKELERYGADAHYYLSVRPGVTGLWQVSGRNNVDYATRV HHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCHHHHH ALDVSYVKERSTLLDISILLRTFKVVFDGGGAY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]