| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782085
Identifier: 91782085
GI number: 91782085
Start: 794358
End: 795872
Strand: Direct
Name: 91782085
Synonym: Bxe_A3751
Alternate gene names: NA
Gene position: 794358-795872 (Clockwise)
Preceding gene: 91782084
Following gene: 91782086
Centisome position: 16.23
GC content: 64.09
Gene sequence:
>1515_bases TTGCCCGGCCGACACATCAACGACCATCAGATGAGGCTCTACATGAAGTACAGACTCAAGGAAGGACCAGCTCAAGCGGC TGCGCGCGCCGGGTTCAGCGCCGCCACGGGTTATCGCATCGATCGGGACCGGCGACTGCCATCGCAGAAGAAGGCCCCGC GCGGGCGTCGCCGGGCCGATCCCCTCGTCGCGATCTTTGACACCGAGATCGTGCCGCTGCTCCAGTCCGCCCCCGGCATC CGGCCGATAGCCGTACTCGACGAGATGCTTCGGCGCCATCCCGAGCTCCCGGGCAACGTGCGTCGCACTCTCGAGCGGCG TATTCGCGACTGGCGCGCCCTTCATGGCGAGGAACGTGACGTCATGTTCCGTCAGGTACACCAGCCCGGTCAGCTAGGCT TGTCCGACTTCACCGAGATGGACAGCCTGGGCATCACCGTGGCGGGTATCGCGCTGGACCACCGCCTCTATCACTTCCGG CTGGCCTGCTCGGGCTTTGAGCACGCTCACGTCATTCTCGGCGGCGAGAGCTATGTCGCGCTGGCCGAAGGGCTTCAGAA CGCCATCTGGGCACTCGGAGGCGCACCGCGCGAGCACCGCAGCGACAGCCTGTCGGCGGCGTTCCGCAATCTCGATGCCG ACGCGCGCGAGGATTTGACCACGCGTTATGATGCGCTGTGCGCTCACTACGGCATGCAGCCCACACGCAACAACCGTGGC GTTGCCCACGAGAACGGCTCCATCGAGAGCCCTCATGGGCACCTCAAGAACGCAGTGCGTGATGCGTTGCTTCTGCGCGG CAGTCACGACTTCGACGATCTCGATTCCTATCGCCGCTTCATCGACGAGATCGTCGGTCGAATCAACGCGCGTAATGGCA AACGCATTGAGGCCGAGCGTGCACTGCTTCAGCCGCTTCCGGTCCAGCGTACGTGCGACTACGAGGAAACGCGCGTGTAC GTCACGACCACCTGCGGCTTCGTCCTGCGCAAGGTGTTCTATACCGTCCCGTCACGACTGATAGGCCATCACCTGCGCGT GCGGCTGTATGACGACCGCCTGGAGCTGTTCCTGGGCGGCACGGCCCTGATGACACTGCAGCGCGGCCGTGCGGGCCCCA ATGGCAAGCACGGCCACGTCATCAACTACCGGCACGTCATCCACGCGCTGCGCCGCAAGCCCATGGCGCTGCTCAACCTG GTCTATCGCGATCAGATCTTTCCGCGCGAGGCCTATCGCCTGACCTTCGATCGCCTGCTCGAGCAGCTCCCGGAGCGTCA GGCATGCAGGACCATGGTTGAACTGCTTAGCCTGGCCCACGAGCACAACTGCGAAGCGCAACTGGCCCAGGCACTGCAGC AGTGTCTGGGCGATGGACGGTTACCCGACCTGGACACACTGTGTTCGCGTTTCGAAGCGAAGCGCACGAACAGCATGCCG GAGGTGAACGTCCAGCTGGCACCGCTGAGCGACTACGAAGCCCTGCTTGACATGGCAACGGAGGTGACGGCATGA
Upstream 100 bases:
>100_bases ACGCCGCGCCGAGGAGTCCGCCCCGCTGCCGGGGTGCCTTGTCGGTGGTCGCGGTAAATCGGGTATGAACAGCTCTTCCA TGTAGCGAAGGGAGGCTGAG
Downstream 100 bases:
>100_bases GTCTCGACATCGACGCCACCCGCCTGTCGCTGCTGCTCAACGATTTGCGGCTGCCCGCCATCAAGCAGATCTGGTCCAGC TTTGCCGAGCGATCCGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MPGRHINDHQMRLYMKYRLKEGPAQAAARAGFSAATGYRIDRDRRLPSQKKAPRGRRRADPLVAIFDTEIVPLLQSAPGI RPIAVLDEMLRRHPELPGNVRRTLERRIRDWRALHGEERDVMFRQVHQPGQLGLSDFTEMDSLGITVAGIALDHRLYHFR LACSGFEHAHVILGGESYVALAEGLQNAIWALGGAPREHRSDSLSAAFRNLDADAREDLTTRYDALCAHYGMQPTRNNRG VAHENGSIESPHGHLKNAVRDALLLRGSHDFDDLDSYRRFIDEIVGRINARNGKRIEAERALLQPLPVQRTCDYEETRVY VTTTCGFVLRKVFYTVPSRLIGHHLRVRLYDDRLELFLGGTALMTLQRGRAGPNGKHGHVINYRHVIHALRRKPMALLNL VYRDQIFPREAYRLTFDRLLEQLPERQACRTMVELLSLAHEHNCEAQLAQALQQCLGDGRLPDLDTLCSRFEAKRTNSMP EVNVQLAPLSDYEALLDMATEVTA
Sequences:
>Translated_504_residues MPGRHINDHQMRLYMKYRLKEGPAQAAARAGFSAATGYRIDRDRRLPSQKKAPRGRRRADPLVAIFDTEIVPLLQSAPGI RPIAVLDEMLRRHPELPGNVRRTLERRIRDWRALHGEERDVMFRQVHQPGQLGLSDFTEMDSLGITVAGIALDHRLYHFR LACSGFEHAHVILGGESYVALAEGLQNAIWALGGAPREHRSDSLSAAFRNLDADAREDLTTRYDALCAHYGMQPTRNNRG VAHENGSIESPHGHLKNAVRDALLLRGSHDFDDLDSYRRFIDEIVGRINARNGKRIEAERALLQPLPVQRTCDYEETRVY VTTTCGFVLRKVFYTVPSRLIGHHLRVRLYDDRLELFLGGTALMTLQRGRAGPNGKHGHVINYRHVIHALRRKPMALLNL VYRDQIFPREAYRLTFDRLLEQLPERQACRTMVELLSLAHEHNCEAQLAQALQQCLGDGRLPDLDTLCSRFEAKRTNSMP EVNVQLAPLSDYEALLDMATEVTA >Mature_503_residues PGRHINDHQMRLYMKYRLKEGPAQAAARAGFSAATGYRIDRDRRLPSQKKAPRGRRRADPLVAIFDTEIVPLLQSAPGIR PIAVLDEMLRRHPELPGNVRRTLERRIRDWRALHGEERDVMFRQVHQPGQLGLSDFTEMDSLGITVAGIALDHRLYHFRL ACSGFEHAHVILGGESYVALAEGLQNAIWALGGAPREHRSDSLSAAFRNLDADAREDLTTRYDALCAHYGMQPTRNNRGV AHENGSIESPHGHLKNAVRDALLLRGSHDFDDLDSYRRFIDEIVGRINARNGKRIEAERALLQPLPVQRTCDYEETRVYV TTTCGFVLRKVFYTVPSRLIGHHLRVRLYDDRLELFLGGTALMTLQRGRAGPNGKHGHVINYRHVIHALRRKPMALLNLV YRDQIFPREAYRLTFDRLLEQLPERQACRTMVELLSLAHEHNCEAQLAQALQQCLGDGRLPDLDTLCSRFEAKRTNSMPE VNVQLAPLSDYEALLDMATEVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 57305; Mature: 57174
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRHINDHQMRLYMKYRLKEGPAQAAARAGFSAATGYRIDRDRRLPSQKKAPRGRRRAD CCCCCCCHHHHEEHHHHHHCCCHHHHHHHCCCCHHCCCEECHHCCCCCHHCCCCCCCCCC PLVAIFDTEIVPLLQSAPGIRPIAVLDEMLRRHPELPGNVRRTLERRIRDWRALHGEERD CEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH VMFRQVHQPGQLGLSDFTEMDSLGITVAGIALDHRLYHFRLACSGFEHAHVILGGESYVA HHHHHHCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHEEEEECCCCCEEEEECCCHHHH LAEGLQNAIWALGGAPREHRSDSLSAAFRNLDADAREDLTTRYDALCAHYGMQPTRNNRG HHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC VAHENGSIESPHGHLKNAVRDALLLRGSHDFDDLDSYRRFIDEIVGRINARNGKRIEAER CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH ALLQPLPVQRTCDYEETRVYVTTTCGFVLRKVFYTVPSRLIGHHLRVRLYDDRLELFLGG HHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHEEEEEECCHHHHHCCC TALMTLQRGRAGPNGKHGHVINYRHVIHALRRKPMALLNLVYRDQIFPREAYRLTFDRLL HHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHH EQLPERQACRTMVELLSLAHEHNCEAQLAQALQQCLGDGRLPDLDTLCSRFEAKRTNSMP HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC EVNVQLAPLSDYEALLDMATEVTA CCEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure PGRHINDHQMRLYMKYRLKEGPAQAAARAGFSAATGYRIDRDRRLPSQKKAPRGRRRAD CCCCCCHHHHEEHHHHHHCCCHHHHHHHCCCCHHCCCEECHHCCCCCHHCCCCCCCCCC PLVAIFDTEIVPLLQSAPGIRPIAVLDEMLRRHPELPGNVRRTLERRIRDWRALHGEERD CEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH VMFRQVHQPGQLGLSDFTEMDSLGITVAGIALDHRLYHFRLACSGFEHAHVILGGESYVA HHHHHHCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHEEEEECCCCCEEEEECCCHHHH LAEGLQNAIWALGGAPREHRSDSLSAAFRNLDADAREDLTTRYDALCAHYGMQPTRNNRG HHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC VAHENGSIESPHGHLKNAVRDALLLRGSHDFDDLDSYRRFIDEIVGRINARNGKRIEAER CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH ALLQPLPVQRTCDYEETRVYVTTTCGFVLRKVFYTVPSRLIGHHLRVRLYDDRLELFLGG HHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHEEEEEECCHHHHHCCC TALMTLQRGRAGPNGKHGHVINYRHVIHALRRKPMALLNLVYRDQIFPREAYRLTFDRLL HHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHH EQLPERQACRTMVELLSLAHEHNCEAQLAQALQQCLGDGRLPDLDTLCSRFEAKRTNSMP HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC EVNVQLAPLSDYEALLDMATEVTA CCEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]