| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is insC1 [C]
Identifier: 91782077
GI number: 91782077
Start: 789737
End: 790144
Strand: Reverse
Name: insC1 [C]
Synonym: Bxe_A3761
Alternate gene names: 91782077
Gene position: 790144-789737 (Counterclockwise)
Preceding gene: 91782081
Following gene: 91782076
Centisome position: 16.14
GC content: 59.07
Gene sequence:
>408_bases ATGCTTGAGCCGTATGCAGGGAAACTTGCACGTACGGTTCTTAGGGGAGGCCGCAGCGGCGACGCTGTGGCCTTACCCGA TTTTAAGCCCGGCTCTAACGTGGAACCCATTGAAGTTCTGACCCAGCCCGAACAGCGCCGCCGGCGCTCTGTCGAGGAGA AGCTTGCGATAGTGCGCGAGACCTTCGAGCCCGGCGCAACCGTATCCGGAGTTGCCCGTCGTCATCAGGTAAATGCAAAC CAGGTGTTCGCCTGGCGCAAGCTCTACCAGGACGGAAGCCTGTCAGCAGTTAGTGCTGGCGAGCAGGTCGTGCCGGCATC CGACCTGGCCGAAGCGATGAAACAGATTCGTGAACTCCAGCGACTGCTGGGCAAAAATGGTATGGACGCCTCCTCATCGC ATAATTGA
Upstream 100 bases:
>100_bases TCGCGGTGTCTGCGCCCTTCGCTGCGGCGGAAGAACCTCGGCAAGACAATGCGCAGGCGTCAGATGGTGGACGCCGGTCA CACCGGCGTGTGACTTTGGA
Downstream 100 bases:
>100_bases GGCCCGTCCTACCGGAGAGAGAAATGGAACCGACAGTCGTGGGCGTAGACATCGCCAAGCGGGTTTTCCAACTTCACTGG ATAGTTTCAGATACCGGCGC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MLEPYAGKLARTVLRGGRSGDAVALPDFKPGSNVEPIEVLTQPEQRRRRSVEEKLAIVRETFEPGATVSGVARRHQVNAN QVFAWRKLYQDGSLSAVSAGEQVVPASDLAEAMKQIRELQRLLGKNGMDASSSHN
Sequences:
>Translated_135_residues MLEPYAGKLARTVLRGGRSGDAVALPDFKPGSNVEPIEVLTQPEQRRRRSVEEKLAIVRETFEPGATVSGVARRHQVNAN QVFAWRKLYQDGSLSAVSAGEQVVPASDLAEAMKQIRELQRLLGKNGMDASSSHN >Mature_135_residues MLEPYAGKLARTVLRGGRSGDAVALPDFKPGSNVEPIEVLTQPEQRRRRSVEEKLAIVRETFEPGATVSGVARRHQVNAN QVFAWRKLYQDGSLSAVSAGEQVVPASDLAEAMKQIRELQRLLGKNGMDASSSHN
Specific function: Involved in the transposition of the insertion sequence is2 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI145693215, Length=93, Percent_Identity=68.8172043010753, Blast_Score=129, Evalue=7e-32, Organism=Escherichia coli, GI145693180, Length=93, Percent_Identity=68.8172043010753, Blast_Score=129, Evalue=7e-32, Organism=Escherichia coli, GI145693177, Length=93, Percent_Identity=68.8172043010753, Blast_Score=129, Evalue=7e-32, Organism=Escherichia coli, GI145693154, Length=93, Percent_Identity=68.8172043010753, Blast_Score=129, Evalue=7e-32, Organism=Escherichia coli, GI145693126, Length=93, Percent_Identity=68.8172043010753, Blast_Score=129, Evalue=7e-32, Organism=Escherichia coli, GI145693097, Length=93, Percent_Identity=68.8172043010753, Blast_Score=129, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR002514 [H]
Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 14753; Mature: 14753
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEPYAGKLARTVLRGGRSGDAVALPDFKPGSNVEPIEVLTQPEQRRRRSVEEKLAIVRE CCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH TFEPGATVSGVARRHQVNANQVFAWRKLYQDGSLSAVSAGEQVVPASDLAEAMKQIRELQ HCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH RLLGKNGMDASSSHN HHHCCCCCCCCCCCC >Mature Secondary Structure MLEPYAGKLARTVLRGGRSGDAVALPDFKPGSNVEPIEVLTQPEQRRRRSVEEKLAIVRE CCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH TFEPGATVSGVARRHQVNANQVFAWRKLYQDGSLSAVSAGEQVVPASDLAEAMKQIRELQ HCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH RLLGKNGMDASSSHN HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA