Click here to switch to the map view.

The map label for this gene is insF1 [C]

Identifier: 91782074

GI number: 91782074

Start: 785554

End: 786345

Strand: Direct

Name: insF1 [C]

Synonym: Bxe_A3767

Alternate gene names: 91782074

Gene position: 785554-786345 (Clockwise)

Preceding gene: 91782072

Following gene: 91782075

Centisome position: 16.05

GC content: 62.12

Gene sequence:

>792_bases
TTGTGTGCGAGGCGGTTAACTGATTTACCCGCGTGCGTTGGTGTCCTGTGGGTAAGCGTCAACGGCTATCGCGCCTGGAA
GCGTGGCGGCACGCCCAAGCGCAAGCGGCTCACTGACGCCCAGTTGCTTACGTTGATTCGGTCCATCCATGCAGAGTTCA
AGGGAGCCTATGGCTCGCCGCGCATGACCGAGGAGATTCGCGCGCGCGGGTTTCCGGCCGGCAAAGCTCGCGTGGAGCGT
CTGATGAGCAAGAACGGCATTCGGGCACGCCACAGGCGTCGTTACCGGGTCACGACCGATTCCAGGCACAAGCTGCCGGT
CGCGCCGAACTTGCTGAACCGCGAATTCACGCCGGTTGCACCGAATCAGGTGTTCAGCTCGGACATCACGTACATCTGGA
CCGACGAAGGATGGCTGTATCTTGCGGTCGTGCTGGACTTGTTCAATCGGGAAGTCGTGGGCTGGTCCATCAAGCCGCGC
ATGACGGTGGACCTTGTGACTGACGCGCTGATGATGGCGTGGTTCCGCCGGAAGCCCGCGCCCGGCGCGCTGTATCACTC
GGACCGTGGCAGCCAGGGCGCGAGCCACGAGTTTCAGCGCAAACTGTCCGACTATGGCATGCGCTGTTCGATGAGCCGCA
AGGGAAATTGTTGGGACACTCAGTTCAGAATACGCCTCGAACGTCGGACCGATCTGACCCGTGTTGGGATTGGCCGAGCT
GCCCTGGCGTTGACCTGTCGATCGGGTTCCGGCGTTCCCCGAGCGTTGCCGGGCTCACCGTCTGTGACCTGA

Upstream 100 bases:

>100_bases
GCATGGGGTGCGTTGATCGCCTCCAATGTGATTCGCCGTGAGATCGCCAGCGCTGCGCGGGAGGTAAAGCTCGAACTGAC
TACTGAACCTGTCCGCATTT

Downstream 100 bases:

>100_bases
TAGGAGCTTTGTACTGCACCATGAGTGTCCTGTCCTGCGAGTGGGGTTGGCGATGCGCCCACTACAACGGATACACGCAT
GGAACAAAACGAAGTGATTC

Product: putative transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MCARRLTDLPACVGVLWVSVNGYRAWKRGGTPKRKRLTDAQLLTLIRSIHAEFKGAYGSPRMTEEIRARGFPAGKARVER
LMSKNGIRARHRRRYRVTTDSRHKLPVAPNLLNREFTPVAPNQVFSSDITYIWTDEGWLYLAVVLDLFNREVVGWSIKPR
MTVDLVTDALMMAWFRRKPAPGALYHSDRGSQGASHEFQRKLSDYGMRCSMSRKGNCWDTQFRIRLERRTDLTRVGIGRA
ALALTCRSGSGVPRALPGSPSVT

Sequences:

>Translated_263_residues
MCARRLTDLPACVGVLWVSVNGYRAWKRGGTPKRKRLTDAQLLTLIRSIHAEFKGAYGSPRMTEEIRARGFPAGKARVER
LMSKNGIRARHRRRYRVTTDSRHKLPVAPNLLNREFTPVAPNQVFSSDITYIWTDEGWLYLAVVLDLFNREVVGWSIKPR
MTVDLVTDALMMAWFRRKPAPGALYHSDRGSQGASHEFQRKLSDYGMRCSMSRKGNCWDTQFRIRLERRTDLTRVGIGRA
ALALTCRSGSGVPRALPGSPSVT
>Mature_263_residues
MCARRLTDLPACVGVLWVSVNGYRAWKRGGTPKRKRLTDAQLLTLIRSIHAEFKGAYGSPRMTEEIRARGFPAGKARVER
LMSKNGIRARHRRRYRVTTDSRHKLPVAPNLLNREFTPVAPNQVFSSDITYIWTDEGWLYLAVVLDLFNREVVGWSIKPR
MTVDLVTDALMMAWFRRKPAPGALYHSDRGSQGASHEFQRKLSDYGMRCSMSRKGNCWDTQFRIRLERRTDLTRVGIGRA
ALALTCRSGSGVPRALPGSPSVT

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=187, Percent_Identity=34.2245989304813, Blast_Score=118, Evalue=5e-27,
Organism=Escherichia coli, GI1788405, Length=217, Percent_Identity=40.0921658986175, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1787263, Length=217, Percent_Identity=40.0921658986175, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786753, Length=217, Percent_Identity=40.0921658986175, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786570, Length=217, Percent_Identity=40.0921658986175, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1786490, Length=217, Percent_Identity=40.0921658986175, Blast_Score=165, Evalue=3e-42,
Organism=Escherichia coli, GI1789981, Length=179, Percent_Identity=34.0782122905028, Blast_Score=103, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 29834; Mature: 29834

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCARRLTDLPACVGVLWVSVNGYRAWKRGGTPKRKRLTDAQLLTLIRSIHAEFKGAYGSP
CCCCHHHHHHHHHHHHHEECCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RMTEEIRARGFPAGKARVERLMSKNGIRARHRRRYRVTTDSRHKLPVAPNLLNREFTPVA
CHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCCCHHHCCCCCCCC
PNQVFSSDITYIWTDEGWLYLAVVLDLFNREVVGWSIKPRMTVDLVTDALMMAWFRRKPA
CCHHHCCCCCEEEECCCHHHHHHHHHHHCCCEECEECCCCCHHHHHHHHHHHHHHHCCCC
PGALYHSDRGSQGASHEFQRKLSDYGMRCSMSRKGNCWDTQFRIRLERRTDLTRVGIGRA
CCCEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCHHHHCCCCE
ALALTCRSGSGVPRALPGSPSVT
EEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCARRLTDLPACVGVLWVSVNGYRAWKRGGTPKRKRLTDAQLLTLIRSIHAEFKGAYGSP
CCCCHHHHHHHHHHHHHEECCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RMTEEIRARGFPAGKARVERLMSKNGIRARHRRRYRVTTDSRHKLPVAPNLLNREFTPVA
CHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCCCHHHCCCCCCCC
PNQVFSSDITYIWTDEGWLYLAVVLDLFNREVVGWSIKPRMTVDLVTDALMMAWFRRKPA
CCHHHCCCCCEEEECCCHHHHHHHHHHHCCCEECEECCCCCHHHHHHHHHHHHHHHCCCC
PGALYHSDRGSQGASHEFQRKLSDYGMRCSMSRKGNCWDTQFRIRLERRTDLTRVGIGRA
CCCEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCHHHHCCCCE
ALALTCRSGSGVPRALPGSPSVT
EEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]