| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91782066
Identifier: 91782066
GI number: 91782066
Start: 776446
End: 778044
Strand: Reverse
Name: 91782066
Synonym: Bxe_A3778
Alternate gene names: NA
Gene position: 778044-776446 (Counterclockwise)
Preceding gene: 91782067
Following gene: 91782065
Centisome position: 15.89
GC content: 61.73
Gene sequence:
>1599_bases ATGGCATCCAGCGACGCTACGTTTCCAGACGATATCGAGGCCTTGAAGGCTCTCCTGCTCGCGCGTGAGGCTGCGTTACG TGAGCGCGAAGGCGAGCTCACGGATCTGCGCGACACTGTAACGACGCTCCAGAAGACACTCTCCGACCGGGCGCTCGAGA TCGAGCACCTGAAGCTGTGGATCGCGAAACTCCAGCGCATGCAGTTTGGTCGCAAATCGGAGAAGATTGATCGCCAGATC GAGCAACTCGAATTGCGTCTCGAAGATCTGCAGGCCGACGATGGTGCGGCGACGGTCGACGCACCGACAAGGCCCCGCTC AGAAGCTGGCAAGCCGACGGGACGCAAGCCACTTCCAGAACATCTACCGCGCGAAGATGTTGTTCATCATCCCGACGACG CCTGCTGTCCGCAATGCGGTGGCGCGCTTGGCGACCTCGGCGAGGACGTTTCCGAGCAACTCGACTATGTACCGGGGCAT TGGCGAGTGATTCGTCACCGCCGGCTCAAGAAGGCCTGTAGCTGTTGCGACTGCATCGTGCAGGCGGCTGCGCCCAGCCG GCCAATCGATCGCGGCATGCCCGGTCCCGGGTTGCTCGCGCATGTTCTGGTCGCCAAATTCTGTGACCACCTTCCCCTGT ACCGGCAGTCAGTGATTTACGCGCGCGACGGCGTGGAACTCAGCCGTTCGACACTCGCGGACTGGGTCGGCCAGTGCAGT GCGTTGCTCCGGCCACTCGTAGAGGTCGTTCGCCGTTACGTGATGGCCGCCCCGAAGATCCACACGGATGACACGCCGGT ACCTGTGCTCGAGCCCGGCAATGGCAAGACCCGTACCGCACGTCTCTGGACATACGTCCGGGATGACCGGCCGGCTGGCT CGAAGGACGCGCCGGCGGTCTGGTTCGCATACAGTCCCACACGGGCTGGTGAATATCCACAGGCCCATCTGAAGGACTTC AGGGGAACGTTGCAGGCCGATGCGTTCGCGGGGTACAACGCAATCTACGAACGTGGTGATGTGCGTGAGGCTGCATGCAT GGCGCACGCGCGCCGCAAATTCCACGATCTGTTCGTCGCACGCAGGAACGAGGTTAACACTGAAGCGTTGCGCCGGATCG GCGAACTGTACGCAATTGAGGCCGCGATTCGTGGCAAACCACCAGACGAACGAAGACGTGTCAGGCAGGAGCAGGCGCGT CCGTTACTCGCTGCTTTCGAGATCTGGCTGCGCTCGACATTGGGTGCGGTGTCGCAGAAAGGCGATACCGCCAAAGCCAT CAACTACGCGCTGAATCAGTGGGCAGCGCTCACGCTGTACGTCGATGACGGCGCCGTGGAAATCGACAATAACGCAGCCG AACGCGCTTTACGTGCCGTCGCTCTCGGCCGAAAAAACTTCCTGCACTTCGGTTCCGACAGCGGCGGCGAACGTGGCGCC GCAATCTATACCCTGGTCGGTACCGCCAAACTAAACGGCCTTGATCCCGAGGCCTACCTGCGCCACGTCATCGCTCGCAT CGCCGAGCACCCTGTCAATCGCGTCGACGAACTGTTGCCATGGGTCGTCGCCGATCAACTCCACCATGACGTCGCTTGA
Upstream 100 bases:
>100_bases CGACTGGCGACAGCCCGTCGATGCAGCGCGCCCCTGCAGTGCTTTGTAAACGTATGTGACAACCCGGGCGTAGCGCAATG CACGCGCGTAAACTGCCTCC
Downstream 100 bases:
>100_bases CTCGCCACGCCGTCAAGAACGGTCGCGGTCGGACGGTTACCTTCGAATCGCCCAGCCTTGCGCCTCTTTGTAGAGCTCGC CAGCAACGTAAGGTTTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MASSDATFPDDIEALKALLLAREAALREREGELTDLRDTVTTLQKTLSDRALEIEHLKLWIAKLQRMQFGRKSEKIDRQI EQLELRLEDLQADDGAATVDAPTRPRSEAGKPTGRKPLPEHLPREDVVHHPDDACCPQCGGALGDLGEDVSEQLDYVPGH WRVIRHRRLKKACSCCDCIVQAAAPSRPIDRGMPGPGLLAHVLVAKFCDHLPLYRQSVIYARDGVELSRSTLADWVGQCS ALLRPLVEVVRRYVMAAPKIHTDDTPVPVLEPGNGKTRTARLWTYVRDDRPAGSKDAPAVWFAYSPTRAGEYPQAHLKDF RGTLQADAFAGYNAIYERGDVREAACMAHARRKFHDLFVARRNEVNTEALRRIGELYAIEAAIRGKPPDERRRVRQEQAR PLLAAFEIWLRSTLGAVSQKGDTAKAINYALNQWAALTLYVDDGAVEIDNNAAERALRAVALGRKNFLHFGSDSGGERGA AIYTLVGTAKLNGLDPEAYLRHVIARIAEHPVNRVDELLPWVVADQLHHDVA
Sequences:
>Translated_532_residues MASSDATFPDDIEALKALLLAREAALREREGELTDLRDTVTTLQKTLSDRALEIEHLKLWIAKLQRMQFGRKSEKIDRQI EQLELRLEDLQADDGAATVDAPTRPRSEAGKPTGRKPLPEHLPREDVVHHPDDACCPQCGGALGDLGEDVSEQLDYVPGH WRVIRHRRLKKACSCCDCIVQAAAPSRPIDRGMPGPGLLAHVLVAKFCDHLPLYRQSVIYARDGVELSRSTLADWVGQCS ALLRPLVEVVRRYVMAAPKIHTDDTPVPVLEPGNGKTRTARLWTYVRDDRPAGSKDAPAVWFAYSPTRAGEYPQAHLKDF RGTLQADAFAGYNAIYERGDVREAACMAHARRKFHDLFVARRNEVNTEALRRIGELYAIEAAIRGKPPDERRRVRQEQAR PLLAAFEIWLRSTLGAVSQKGDTAKAINYALNQWAALTLYVDDGAVEIDNNAAERALRAVALGRKNFLHFGSDSGGERGA AIYTLVGTAKLNGLDPEAYLRHVIARIAEHPVNRVDELLPWVVADQLHHDVA >Mature_531_residues ASSDATFPDDIEALKALLLAREAALREREGELTDLRDTVTTLQKTLSDRALEIEHLKLWIAKLQRMQFGRKSEKIDRQIE QLELRLEDLQADDGAATVDAPTRPRSEAGKPTGRKPLPEHLPREDVVHHPDDACCPQCGGALGDLGEDVSEQLDYVPGHW RVIRHRRLKKACSCCDCIVQAAAPSRPIDRGMPGPGLLAHVLVAKFCDHLPLYRQSVIYARDGVELSRSTLADWVGQCSA LLRPLVEVVRRYVMAAPKIHTDDTPVPVLEPGNGKTRTARLWTYVRDDRPAGSKDAPAVWFAYSPTRAGEYPQAHLKDFR GTLQADAFAGYNAIYERGDVREAACMAHARRKFHDLFVARRNEVNTEALRRIGELYAIEAAIRGKPPDERRRVRQEQARP LLAAFEIWLRSTLGAVSQKGDTAKAINYALNQWAALTLYVDDGAVEIDNNAAERALRAVALGRKNFLHFGSDSGGERGAA IYTLVGTAKLNGLDPEAYLRHVIARIAEHPVNRVDELLPWVVADQLHHDVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 59203; Mature: 59072
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSDATFPDDIEALKALLLAREAALREREGELTDLRDTVTTLQKTLSDRALEIEHLKLW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAKLQRMQFGRKSEKIDRQIEQLELRLEDLQADDGAATVDAPTRPRSEAGKPTGRKPLPE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHH HLPREDVVHHPDDACCPQCGGALGDLGEDVSEQLDYVPGHWRVIRHRRLKKACSCCDCIV HCCCHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH QAAAPSRPIDRGMPGPGLLAHVLVAKFCDHLPLYRQSVIYARDGVELSRSTLADWVGQCS HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ALLRPLVEVVRRYVMAAPKIHTDDTPVPVLEPGNGKTRTARLWTYVRDDRPAGSKDAPAV HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHEECCCCCCCCCCCEE WFAYSPTRAGEYPQAHLKDFRGTLQADAFAGYNAIYERGDVREAACMAHARRKFHDLFVA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RRNEVNTEALRRIGELYAIEAAIRGKPPDERRRVRQEQARPLLAAFEIWLRSTLGAVSQK HHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC GDTAKAINYALNQWAALTLYVDDGAVEIDNNAAERALRAVALGRKNFLHFGSDSGGERGA CCHHHHHHHHHHCCEEEEEEEECCCEEECCHHHHHHHHHHHHCCHHCEECCCCCCCCCCC AIYTLVGTAKLNGLDPEAYLRHVIARIAEHPVNRVDELLPWVVADQLHHDVA EEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASSDATFPDDIEALKALLLAREAALREREGELTDLRDTVTTLQKTLSDRALEIEHLKLW CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAKLQRMQFGRKSEKIDRQIEQLELRLEDLQADDGAATVDAPTRPRSEAGKPTGRKPLPE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHH HLPREDVVHHPDDACCPQCGGALGDLGEDVSEQLDYVPGHWRVIRHRRLKKACSCCDCIV HCCCHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH QAAAPSRPIDRGMPGPGLLAHVLVAKFCDHLPLYRQSVIYARDGVELSRSTLADWVGQCS HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ALLRPLVEVVRRYVMAAPKIHTDDTPVPVLEPGNGKTRTARLWTYVRDDRPAGSKDAPAV HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHEECCCCCCCCCCCEE WFAYSPTRAGEYPQAHLKDFRGTLQADAFAGYNAIYERGDVREAACMAHARRKFHDLFVA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RRNEVNTEALRRIGELYAIEAAIRGKPPDERRRVRQEQARPLLAAFEIWLRSTLGAVSQK HHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC GDTAKAINYALNQWAALTLYVDDGAVEIDNNAAERALRAVALGRKNFLHFGSDSGGERGA CCHHHHHHHHHHCCEEEEEEEECCCEEECCHHHHHHHHHHHHCCHHCEECCCCCCCCCCC AIYTLVGTAKLNGLDPEAYLRHVIARIAEHPVNRVDELLPWVVADQLHHDVA EEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]