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The map label for this gene is abcA [H]

Identifier: 91782046

GI number: 91782046

Start: 746227

End: 747573

Strand: Direct

Name: abcA [H]

Synonym: Bxe_A3798

Alternate gene names: 91782046

Gene position: 746227-747573 (Clockwise)

Preceding gene: 91782045

Following gene: 91782047

Centisome position: 15.24

GC content: 54.94

Gene sequence:

>1347_bases
ATGTCATCTGAGATTGTCATTCGCGTTAAGAATCTCTCGAAGTGTTTCAATATTTATGATCAGCCTCGAGACAGGTTGAA
ACAAGCGATCTTGCCGCGCCTGCAGCGCTTGTTCGGCCGGCCGCAAAAGAGCTATCACAAAGAATTCTGGGCACTCAGAA
ACGCGGACTTCGAGATCAGAAGAGGGGAGACGGTTGGGATTATCGGCCGTAACGGCTCGGGAAAGTCTACCTTGTTGCAG
TTGCTGTGCGGCACTCTGACGCCGACTCACGGAGATATCGAGGTCACCGGAAAAGTCGCCGCGTTGCTCGAACTGGGCGC
AGGTTTCAATCCGGAATTCACCGGCCGTGAGAACGTGTTTTTAAGCGGTTCCTTCTATGGACTGACTCGCGAGCAGGTGC
AGGAGCGTTTTGATCGCATCGCAGCGTTTGCAGACATCGGCGACCATATCGAACAGCCGGTCAAGACGTATTCGAGCGGT
ATGTTCGTGCGCCTCGCGTTCGCAGTGATTGCGCACGTCGACGCCGATATTCTTGTGATCGACGAGGCGCTGTCGGTCGG
CGACGCGGTATTTACGCAGAAATGCATGCGCTTCATCCGCTCATTTCAGGAGAAGGGGACGCTGTTATTCGTGAGCCATG
ATATGCAGTCAGTCGTGAATCTGTGCCGCAATGCGATCTGGCTGAATGCGGGCGAAACGAGGATGAAAGGCACTTCCAAA
AATGTGTCGGAGGCTTACCTCAAGTACACGTTGCAGGAAGTCTACGGGGAAGAGGCGATTCTGCTGTCGGCCGCGCCGAA
AGAAAGCACGCTGGATGCGCCGATGTTTGAGGAAGCGGGTCCGCCGATGCTGGACTATGAAGCGGTCGCATCTGTGAGCT
CTAACTTGTTTGACGCGAAAGGTTGGAAGACTGGCGACGCGGAAATTGAAGCGGTACAACTCGAGAGTCTCACCGGCGAG
AACGATGGCATTTTGCGAGGCGGTGAATTGGTCAGAATGGTGGTCAGGGCTCGTGCGCACCAACCGCTTGAGCGGCCAGT
TATAGGTTTTATGGTGCGTGACCGTCTTGGTCAGAACTTGTTCGGGGAAAACACATTGTCGCTTACTGCTCTCGATCAGG
CGCGCGTTGCTGCCGGCCAGATGTTCGAGGGGGAGTTCGTATTCCGCCTGCCAATGTTGCCGGATGGGCAGTACTCAGTC
ACCGCGTCGGTGGCAGACGGAGATCTCCATAACAACGTACAGCATCATTTGCTTCACGACGCACTTATCATCAACGTGGC
GTCGAGCAAGGTTCGCTGGGGATTGGTCGGTGTGCCCTTCGAGCGGGTTACCCTGAATTGCATATGA

Upstream 100 bases:

>100_bases
GTACCGTCTTTCCATGGCTGGGCGATCAGCATGATTCTCGGTGCGCTCGTTGCATGGGGTGGCTTCTGGCTTTTCCAAAG
GCTGCGCAGAGGATTTTCCG

Downstream 100 bases:

>100_bases
TGAAATCGATAAGACAACTCTACAAAGAGCACGAAGGCAAAGTCTCCGACAAATGGTCGCTTTACCTCGATGAATACAAT
CGTCTGTTTGCACCGTATCG

Product: ABC O-antigen/lipopolysaccharide exporter, ATPase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSSEIVIRVKNLSKCFNIYDQPRDRLKQAILPRLQRLFGRPQKSYHKEFWALRNADFEIRRGETVGIIGRNGSGKSTLLQ
LLCGTLTPTHGDIEVTGKVAALLELGAGFNPEFTGRENVFLSGSFYGLTREQVQERFDRIAAFADIGDHIEQPVKTYSSG
MFVRLAFAVIAHVDADILVIDEALSVGDAVFTQKCMRFIRSFQEKGTLLFVSHDMQSVVNLCRNAIWLNAGETRMKGTSK
NVSEAYLKYTLQEVYGEEAILLSAAPKESTLDAPMFEEAGPPMLDYEAVASVSSNLFDAKGWKTGDAEIEAVQLESLTGE
NDGILRGGELVRMVVRARAHQPLERPVIGFMVRDRLGQNLFGENTLSLTALDQARVAAGQMFEGEFVFRLPMLPDGQYSV
TASVADGDLHNNVQHHLLHDALIINVASSKVRWGLVGVPFERVTLNCI

Sequences:

>Translated_448_residues
MSSEIVIRVKNLSKCFNIYDQPRDRLKQAILPRLQRLFGRPQKSYHKEFWALRNADFEIRRGETVGIIGRNGSGKSTLLQ
LLCGTLTPTHGDIEVTGKVAALLELGAGFNPEFTGRENVFLSGSFYGLTREQVQERFDRIAAFADIGDHIEQPVKTYSSG
MFVRLAFAVIAHVDADILVIDEALSVGDAVFTQKCMRFIRSFQEKGTLLFVSHDMQSVVNLCRNAIWLNAGETRMKGTSK
NVSEAYLKYTLQEVYGEEAILLSAAPKESTLDAPMFEEAGPPMLDYEAVASVSSNLFDAKGWKTGDAEIEAVQLESLTGE
NDGILRGGELVRMVVRARAHQPLERPVIGFMVRDRLGQNLFGENTLSLTALDQARVAAGQMFEGEFVFRLPMLPDGQYSV
TASVADGDLHNNVQHHLLHDALIINVASSKVRWGLVGVPFERVTLNCI
>Mature_447_residues
SSEIVIRVKNLSKCFNIYDQPRDRLKQAILPRLQRLFGRPQKSYHKEFWALRNADFEIRRGETVGIIGRNGSGKSTLLQL
LCGTLTPTHGDIEVTGKVAALLELGAGFNPEFTGRENVFLSGSFYGLTREQVQERFDRIAAFADIGDHIEQPVKTYSSGM
FVRLAFAVIAHVDADILVIDEALSVGDAVFTQKCMRFIRSFQEKGTLLFVSHDMQSVVNLCRNAIWLNAGETRMKGTSKN
VSEAYLKYTLQEVYGEEAILLSAAPKESTLDAPMFEEAGPPMLDYEAVASVSSNLFDAKGWKTGDAEIEAVQLESLTGEN
DGILRGGELVRMVVRARAHQPLERPVIGFMVRDRLGQNLFGENTLSLTALDQARVAAGQMFEGEFVFRLPMLPDGQYSVT
ASVADGDLHNNVQHHLLHDALIINVASSKVRWGLVGVPFERVTLNCI

Specific function: Influences the expression of the surface array protein gene (vapA). May have both regulatory and transport activities [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=241, Percent_Identity=24.896265560166, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI6005701, Length=214, Percent_Identity=27.1028037383178, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI27262624, Length=218, Percent_Identity=25.2293577981651, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI27262626, Length=218, Percent_Identity=25.2293577981651, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI27477115, Length=221, Percent_Identity=26.2443438914027, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI27436953, Length=207, Percent_Identity=25.1207729468599, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI27881501, Length=272, Percent_Identity=22.4264705882353, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI30795238, Length=272, Percent_Identity=22.4264705882353, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI31657092, Length=216, Percent_Identity=26.3888888888889, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI66529005, Length=250, Percent_Identity=25.6, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1789891, Length=210, Percent_Identity=27.6190476190476, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786319, Length=238, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI48995001, Length=206, Percent_Identity=26.2135922330097, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081782, Length=205, Percent_Identity=24.8780487804878, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI48994943, Length=242, Percent_Identity=26.0330578512397, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789032, Length=268, Percent_Identity=25, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790467, Length=202, Percent_Identity=25.7425742574257, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786253, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1789751, Length=155, Percent_Identity=30.3225806451613, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87081709, Length=202, Percent_Identity=25.2475247524752, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788210, Length=189, Percent_Identity=26.984126984127, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=214, Percent_Identity=23.8317757009346, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=27.2340425531915, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=23.8317757009346, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533608, Length=221, Percent_Identity=23.9819004524887, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007184, Length=238, Percent_Identity=25.6302521008403, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI221500365, Length=238, Percent_Identity=25.6302521008403, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24648314, Length=198, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24582014, Length=221, Percent_Identity=25.3393665158371, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24582012, Length=221, Percent_Identity=25.3393665158371, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 49671; Mature: 49540

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEIVIRVKNLSKCFNIYDQPRDRLKQAILPRLQRLFGRPQKSYHKEFWALRNADFEIR
CCCCEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEE
RGETVGIIGRNGSGKSTLLQLLCGTLTPTHGDIEVTGKVAALLELGAGFNPEFTGRENVF
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCEE
LSGSFYGLTREQVQERFDRIAAFADIGDHIEQPVKTYSSGMFVRLAFAVIAHVDADILVI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE
DEALSVGDAVFTQKCMRFIRSFQEKGTLLFVSHDMQSVVNLCRNAIWLNAGETRMKGTSK
ECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEECCCCHHCCCCCC
NVSEAYLKYTLQEVYGEEAILLSAAPKESTLDAPMFEEAGPPMLDYEAVASVSSNLFDAK
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCC
GWKTGDAEIEAVQLESLTGENDGILRGGELVRMVVRARAHQPLERPVIGFMVRDRLGQNL
CCCCCCCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHCCCC
FGENTLSLTALDQARVAAGQMFEGEFVFRLPMLPDGQYSVTASVADGDLHNNVQHHLLHD
CCCCCEEEEEHHHHHHHHCCEECCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHH
ALIINVASSKVRWGLVGVPFERVTLNCI
HHEEEECCCCEEEEEECCCHHHEEEECC
>Mature Secondary Structure 
SSEIVIRVKNLSKCFNIYDQPRDRLKQAILPRLQRLFGRPQKSYHKEFWALRNADFEIR
CCCEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEE
RGETVGIIGRNGSGKSTLLQLLCGTLTPTHGDIEVTGKVAALLELGAGFNPEFTGRENVF
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCEE
LSGSFYGLTREQVQERFDRIAAFADIGDHIEQPVKTYSSGMFVRLAFAVIAHVDADILVI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE
DEALSVGDAVFTQKCMRFIRSFQEKGTLLFVSHDMQSVVNLCRNAIWLNAGETRMKGTSK
ECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEECCCCHHCCCCCC
NVSEAYLKYTLQEVYGEEAILLSAAPKESTLDAPMFEEAGPPMLDYEAVASVSSNLFDAK
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCC
GWKTGDAEIEAVQLESLTGENDGILRGGELVRMVVRARAHQPLERPVIGFMVRDRLGQNL
CCCCCCCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHCCCC
FGENTLSLTALDQARVAAGQMFEGEFVFRLPMLPDGQYSVTASVADGDLHNNVQHHLLHD
CCCCCEEEEEHHHHHHHHCCEECCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHH
ALIINVASSKVRWGLVGVPFERVTLNCI
HHEEEECCCCEEEEEECCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8491726 [H]