| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yqgE [C]
Identifier: 91782033
GI number: 91782033
Start: 734284
End: 734949
Strand: Direct
Name: yqgE [C]
Synonym: Bxe_A3811
Alternate gene names: 91782033
Gene position: 734284-734949 (Clockwise)
Preceding gene: 91782032
Following gene: 91782034
Centisome position: 15.0
GC content: 60.36
Gene sequence:
>666_bases ATGGCTCACGGCTCGCTTCATGGCACACATCGCGGTTCCACGCTCAAAGCCCCGCCATCCTGCATCGTCTTTGCTAAAAT CCGAACTATGTCCAAGAGTACCGATCGCATCAATCTGACCAACCAGTTCCTGATCGCCATGCCGAACATGGCGGATCCGA CGTTTTCAGGAACGGTGGTCTACCTTTGCGATCACAGTGAGCGCGGCGCGCTCGGCCTCGTGATCAACCGGCCGACCGAT ATCGACCTGCAAGCGCTCTTCAGTCGCATCGATCTCAAGCTCGAGATCGAACCCCTTCTCCATGTACCCGTGTATTTCGG CGGCCCGGTGCAAACCGAGCGCGGCTTCGTGCTGCACGATCCAAAAGACGGCAACGCGTACACCTCGTCCATGTCGGTGC CGGGCGGTCTCGAAATGACCACCTCGAAAGACGTGCTCGAAGCCGTGGCGAGCGGCACGGGGCCCGAACGTTTCCTGCTC ACGCTCGGCCATGCCGGCTGGGGCGCGGGGCAGCTCGAAGAAGAGATTTCGAAAAACGGCTGGCTGACGGTCGAAGCCGA CCCGAAAATCGTTTTCGACGTGCCCGCCGAAGAGCGCCTCGAAGCGGCTTTGGCTCTTCTCGGCATCAATCTGTCGATGC TTTCGGGCGAGGCGGGTCACGCATGA
Upstream 100 bases:
>100_bases CAACCCGGGCGGCACGCAACAGCTGTGCCGCAAAACAGCGCGAACCCGCACGGTGGCGAGCGCCCGCGTGCGTGATAGAG TGCAACCTGATTCGCCGTCG
Downstream 100 bases:
>100_bases GCCTGGCCGCCGGACGTGAGGCGACGCTGCTTGCGTTCGACTACGGTGAAAAACGCATCGGCGTGGCGGTCGGCAATTCA CTGACGAAGAGCGCGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MAHGSLHGTHRGSTLKAPPSCIVFAKIRTMSKSTDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTD IDLQALFSRIDLKLEIEPLLHVPVYFGGPVQTERGFVLHDPKDGNAYTSSMSVPGGLEMTTSKDVLEAVASGTGPERFLL TLGHAGWGAGQLEEEISKNGWLTVEADPKIVFDVPAEERLEAALALLGINLSMLSGEAGHA
Sequences:
>Translated_221_residues MAHGSLHGTHRGSTLKAPPSCIVFAKIRTMSKSTDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTD IDLQALFSRIDLKLEIEPLLHVPVYFGGPVQTERGFVLHDPKDGNAYTSSMSVPGGLEMTTSKDVLEAVASGTGPERFLL TLGHAGWGAGQLEEEISKNGWLTVEADPKIVFDVPAEERLEAALALLGINLSMLSGEAGHA >Mature_220_residues AHGSLHGTHRGSTLKAPPSCIVFAKIRTMSKSTDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDI DLQALFSRIDLKLEIEPLLHVPVYFGGPVQTERGFVLHDPKDGNAYTSSMSVPGGLEMTTSKDVLEAVASGTGPERFLLT LGHAGWGAGQLEEEISKNGWLTVEADPKIVFDVPAEERLEAALALLGINLSMLSGEAGHA
Specific function: Unknown
COG id: COG1678
COG function: function code K; Putative transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0301 (AlgH) family [H]
Homologues:
Organism=Escherichia coli, GI87082187, Length=191, Percent_Identity=40.3141361256544, Blast_Score=152, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003774 [H]
Pfam domain/function: PF02622 DUF179 [H]
EC number: NA
Molecular weight: Translated: 23690; Mature: 23559
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHGSLHGTHRGSTLKAPPSCIVFAKIRTMSKSTDRINLTNQFLIAMPNMADPTFSGTVV CCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCEEEECCEEEEEECCCCCCCCCCEEE YLCDHSERGALGLVINRPTDIDLQALFSRIDLKLEIEPLLHVPVYFGGPVQTERGFVLHD EEEECCCCCEEEEEEECCCCCCHHHHHHHCCEEEEEEEEEEEEEEECCCCCCCCCEEEEC PKDGNAYTSSMSVPGGLEMTTSKDVLEAVASGTGPERFLLTLGHAGWGAGQLEEEISKNG CCCCCEEEECCCCCCCCEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCC WLTVEADPKIVFDVPAEERLEAALALLGINLSMLSGEAGHA CEEEECCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure AHGSLHGTHRGSTLKAPPSCIVFAKIRTMSKSTDRINLTNQFLIAMPNMADPTFSGTVV CCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCEEEECCEEEEEECCCCCCCCCCEEE YLCDHSERGALGLVINRPTDIDLQALFSRIDLKLEIEPLLHVPVYFGGPVQTERGFVLHD EEEECCCCCEEEEEEECCCCCCHHHHHHHCCEEEEEEEEEEEEEEECCCCCCCCCEEEEC PKDGNAYTSSMSVPGGLEMTTSKDVLEAVASGTGPERFLLTLGHAGWGAGQLEEEISKNG CCCCCEEEECCCCCCCCEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCC WLTVEADPKIVFDVPAEERLEAALALLGINLSMLSGEAGHA CEEEECCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA