| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782023
Identifier: 91782023
GI number: 91782023
Start: 725535
End: 726125
Strand: Reverse
Name: 91782023
Synonym: Bxe_A3821
Alternate gene names: NA
Gene position: 726125-725535 (Counterclockwise)
Preceding gene: 91782025
Following gene: 91782022
Centisome position: 14.83
GC content: 65.99
Gene sequence:
>591_bases ATGCTTAGACGCACCTTTATCTGGGGCACGCCCGGATCGCTTCTGGCACTTGGCACTGTGCTCTCAGGCTGTACCACCAC GCCTTCCTCCGATGCGAGCCGTAGCGAGCAGAGGGACAAGCGCCGCTCTATCGACGCAGGTGTCGACTCGACTCTCGCGC GCGTCTATGGGCTCGCGGGCGGCTCGCGCGAACTGGTCGGCAAGGCGCACGGCGTACTGACGTTCCCCTCCGTGATCGAC GCCGGCTTCGTGGTCGGCGGCCAGTATGGCGAGGGGTCCTTGCGGGTCGGCGGGCGCACGGTCGGCTACTACAGTACGGC GACCGGTTCGATCGGCTGGCAGATCGGCGCGCAATCGCGCGCGATCGTATTCCTGTTCATGACCGACGATTCGCTCAACC GCTTCCGGAGCAGAGACGGCTGGTCGGCCGGCGGCGATGCCTCCGTGGCCGTGCTGAAAGTCGGAGCGAACGGCGATCTC GACACCAGTACGGCGAGCGGACAGGTCGACGCTTTCGTGCTGACCAACACCGGCCTGATGGCGGGTGCGTCGCTGCAAGG CACCAAAGTCACGCGGCTCACGTCGCTTTGA
Upstream 100 bases:
>100_bases GTGCGTTCGAACATAGACAGCGGTCTGTACGTTGTCGTACCGCATTCTCCCGCGCGAGCGCGTAGCGTGTCTCTTATCGT CGACCAGCGGGGAGAAAATC
Downstream 100 bases:
>100_bases CATTCAAACCGGGGAGCGCGCGATGCGCGCCCCTCGTCGTTGACACACATCGTTGACACAGAGTGGAAAAACCATGTTGC GAAGCATACAAGACTTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLRRTFIWGTPGSLLALGTVLSGCTTTPSSDASRSEQRDKRRSIDAGVDSTLARVYGLAGGSRELVGKAHGVLTFPSVID AGFVVGGQYGEGSLRVGGRTVGYYSTATGSIGWQIGAQSRAIVFLFMTDDSLNRFRSRDGWSAGGDASVAVLKVGANGDL DTSTASGQVDAFVLTNTGLMAGASLQGTKVTRLTSL
Sequences:
>Translated_196_residues MLRRTFIWGTPGSLLALGTVLSGCTTTPSSDASRSEQRDKRRSIDAGVDSTLARVYGLAGGSRELVGKAHGVLTFPSVID AGFVVGGQYGEGSLRVGGRTVGYYSTATGSIGWQIGAQSRAIVFLFMTDDSLNRFRSRDGWSAGGDASVAVLKVGANGDL DTSTASGQVDAFVLTNTGLMAGASLQGTKVTRLTSL >Mature_196_residues MLRRTFIWGTPGSLLALGTVLSGCTTTPSSDASRSEQRDKRRSIDAGVDSTLARVYGLAGGSRELVGKAHGVLTFPSVID AGFVVGGQYGEGSLRVGGRTVGYYSTATGSIGWQIGAQSRAIVFLFMTDDSLNRFRSRDGWSAGGDASVAVLKVGANGDL DTSTASGQVDAFVLTNTGLMAGASLQGTKVTRLTSL
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20262; Mature: 20262
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRTFIWGTPGSLLALGTVLSGCTTTPSSDASRSEQRDKRRSIDAGVDSTLARVYGLAG CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC GSRELVGKAHGVLTFPSVIDAGFVVGGQYGEGSLRVGGRTVGYYSTATGSIGWQIGAQSR CCHHHHHCCCCEEECHHHHCCCEEEECCCCCCEEEECCEEEEEEECCCCCCEEEECCCCC AIVFLFMTDDSLNRFRSRDGWSAGGDASVAVLKVGANGDLDTSTASGQVDAFVLTNTGLM EEEEEEEECCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCEE AGASLQGTKVTRLTSL ECCCCCCCEEEEEECC >Mature Secondary Structure MLRRTFIWGTPGSLLALGTVLSGCTTTPSSDASRSEQRDKRRSIDAGVDSTLARVYGLAG CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC GSRELVGKAHGVLTFPSVIDAGFVVGGQYGEGSLRVGGRTVGYYSTATGSIGWQIGAQSR CCHHHHHCCCCEEECHHHHCCCEEEECCCCCCEEEECCEEEEEEECCCCCCEEEECCCCC AIVFLFMTDDSLNRFRSRDGWSAGGDASVAVLKVGANGDLDTSTASGQVDAFVLTNTGLM EEEEEEEECCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCEE AGASLQGTKVTRLTSL ECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA