| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782016
Identifier: 91782016
GI number: 91782016
Start: 718165
End: 719250
Strand: Reverse
Name: 91782016
Synonym: Bxe_A3828
Alternate gene names: NA
Gene position: 719250-718165 (Counterclockwise)
Preceding gene: 91782017
Following gene: 91782014
Centisome position: 14.69
GC content: 65.65
Gene sequence:
>1086_bases ATGAGCACTCCGCAGCGCCGCTCCGCCAGCACCCCGCTCATGCCGGAAAGCGGCGCGTTGCCGCCGCCGGCGAAGCCTGG CGTCGAGACCGGCCTCGTGCGTATCGCGCCTGGCCTGCTCGGCAAAACATCGCGGCTGCGCTCAGTCATGGTCTGGGTCG TCGGAGTGATGGGCTGTATCGCCGTCATCCTGGTGGTGCTGCACCTCGGCTCACTGCAGAAGATGGCCGAACTGATACGC TCGGCGCGCCCCGGCTGGATGCTGGTCGCACTCGCCGTTCAATGCGGCACGTATGTCAGCGCGGCGTTCGTATGGCGCCA GACTTTGCGCGAGGCCGGACATCCTCTGTCCCTGCGCACCTTGACACCACTCGGCATCGCCAAGGTATTCACGGATCAGG TGTTGCCGAGCGGCGGCATCAGCGGCACGATGCTGGTGGTGCGTGGCCTGACCGGCCGGCACGTCCCGGCCGGAATAGCG ATGGCGGCCATGCTGGTCGGCATGGTGTCCTACGACATCGCCTATCTGCTCGTGGTGCTCGCAAGCGCCGGCATGCTGTG GTGGCAGCACCGGCTGAACACGGCATTGGTCATCGGCGTGGCGGTCTTCGTAGTGGTCACCGTAGCGGTGCCGGCCGCCG TGCTGGGACTCAAACAATGGGGCCAACGTGCGCCGATCGCGTGGCTCAGCAAGTGGCTGGGCGTCACCACACTGCTTCGA CAATTGACCGACGCGCCCACTCATCTTCTACGCAGCCCGCGCCTGCTACTGCAAACTGTCGGGCTGCAACTGGCCATCTT CGTCTGCGATGCCCTGACGCTCTGGCTCGCGTTCAATGCGATCGGCGAAGTGCCGCCGCTTTGGGTCGTGTTCGTGAGCT TCATCATTGCGTCGATGGTGGCCACCATCGGTCCGATTCCGGTCGGCCTGGGGACCTTCGAAGCCACCTCCGTGGGAATG CTGAATCTGCTCGGCGTGTCGGTGGAGGCGGCGCTCGCCGCCACGCTTCTGTTGCGCGCGCTGACCTTCTGGCTACCGAT GCTGCCCGGCATCTGGCTGGCTCGCCGGGAGATTCGGCTTCATTAG
Upstream 100 bases:
>100_bases CCTGCTTTAGAATCATTTCGGCACTGGAGCGAAGCGCGGCTACGCGTCCGGGCTCGCACTCCTGCAGTGCCTTCTATTGC GTCCCGACGCGTCCCGACCC
Downstream 100 bases:
>100_bases GCGGCGCGGATCGCATTCGAGGTGATCGGGTCCATTCACGACACGACACGACACCACACGCGGCGCGGATTCATGCAACG TCTAACTGATCTTCAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSTPQRRSASTPLMPESGALPPPAKPGVETGLVRIAPGLLGKTSRLRSVMVWVVGVMGCIAVILVVLHLGSLQKMAELIR SARPGWMLVALAVQCGTYVSAAFVWRQTLREAGHPLSLRTLTPLGIAKVFTDQVLPSGGISGTMLVVRGLTGRHVPAGIA MAAMLVGMVSYDIAYLLVVLASAGMLWWQHRLNTALVIGVAVFVVVTVAVPAAVLGLKQWGQRAPIAWLSKWLGVTTLLR QLTDAPTHLLRSPRLLLQTVGLQLAIFVCDALTLWLAFNAIGEVPPLWVVFVSFIIASMVATIGPIPVGLGTFEATSVGM LNLLGVSVEAALAATLLLRALTFWLPMLPGIWLARREIRLH
Sequences:
>Translated_361_residues MSTPQRRSASTPLMPESGALPPPAKPGVETGLVRIAPGLLGKTSRLRSVMVWVVGVMGCIAVILVVLHLGSLQKMAELIR SARPGWMLVALAVQCGTYVSAAFVWRQTLREAGHPLSLRTLTPLGIAKVFTDQVLPSGGISGTMLVVRGLTGRHVPAGIA MAAMLVGMVSYDIAYLLVVLASAGMLWWQHRLNTALVIGVAVFVVVTVAVPAAVLGLKQWGQRAPIAWLSKWLGVTTLLR QLTDAPTHLLRSPRLLLQTVGLQLAIFVCDALTLWLAFNAIGEVPPLWVVFVSFIIASMVATIGPIPVGLGTFEATSVGM LNLLGVSVEAALAATLLLRALTFWLPMLPGIWLARREIRLH >Mature_360_residues STPQRRSASTPLMPESGALPPPAKPGVETGLVRIAPGLLGKTSRLRSVMVWVVGVMGCIAVILVVLHLGSLQKMAELIRS ARPGWMLVALAVQCGTYVSAAFVWRQTLREAGHPLSLRTLTPLGIAKVFTDQVLPSGGISGTMLVVRGLTGRHVPAGIAM AAMLVGMVSYDIAYLLVVLASAGMLWWQHRLNTALVIGVAVFVVVTVAVPAAVLGLKQWGQRAPIAWLSKWLGVTTLLRQ LTDAPTHLLRSPRLLLQTVGLQLAIFVCDALTLWLAFNAIGEVPPLWVVFVSFIIASMVATIGPIPVGLGTFEATSVGML NLLGVSVEAALAATLLLRALTFWLPMLPGIWLARREIRLH
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38547; Mature: 38416
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPQRRSASTPLMPESGALPPPAKPGVETGLVRIAPGLLGKTSRLRSVMVWVVGVMGCI CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AVILVVLHLGSLQKMAELIRSARPGWMLVALAVQCGTYVSAAFVWRQTLREAGHPLSLRT HHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC LTPLGIAKVFTDQVLPSGGISGTMLVVRGLTGRHVPAGIAMAAMLVGMVSYDIAYLLVVL CCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASAGMLWWQHRLNTALVIGVAVFVVVTVAVPAAVLGLKQWGQRAPIAWLSKWLGVTTLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QLTDAPTHLLRSPRLLLQTVGLQLAIFVCDALTLWLAFNAIGEVPPLWVVFVSFIIASMV HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ATIGPIPVGLGTFEATSVGMLNLLGVSVEAALAATLLLRALTFWLPMLPGIWLARREIRL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC H C >Mature Secondary Structure STPQRRSASTPLMPESGALPPPAKPGVETGLVRIAPGLLGKTSRLRSVMVWVVGVMGCI CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AVILVVLHLGSLQKMAELIRSARPGWMLVALAVQCGTYVSAAFVWRQTLREAGHPLSLRT HHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC LTPLGIAKVFTDQVLPSGGISGTMLVVRGLTGRHVPAGIAMAAMLVGMVSYDIAYLLVVL CCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASAGMLWWQHRLNTALVIGVAVFVVVTVAVPAAVLGLKQWGQRAPIAWLSKWLGVTTLLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QLTDAPTHLLRSPRLLLQTVGLQLAIFVCDALTLWLAFNAIGEVPPLWVVFVSFIIASMV HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ATIGPIPVGLGTFEATSVGMLNLLGVSVEAALAATLLLRALTFWLPMLPGIWLARREIRL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA