| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781985
Identifier: 91781985
GI number: 91781985
Start: 678773
End: 679267
Strand: Reverse
Name: 91781985
Synonym: Bxe_A3859
Alternate gene names: NA
Gene position: 679267-678773 (Counterclockwise)
Preceding gene: 91781988
Following gene: 91781974
Centisome position: 13.87
GC content: 70.51
Gene sequence:
>495_bases ATGACCACCTCGCTTCGACACACCGCTAGCTGGATGTTTTTCGCGATCGCATCGTGCGCGTTGCCGGCGTTCGCGCAAAA CGCCGCGCCCAATCCCGCGGCGGCCGCACCCGCCGCGACGGCCGCCAACGACTATGGCGTCAATGCCCAGCTTCCCGCCA ACCGGCGCACCGCGCATCGCAACAGCGAGCAGGCGCTGCTCGGCGCTCCCAACCCATACGGCACGGACAACGCGCAGGAC AATACCGACGACGCCCAGCGCACCGCGCTGCTCGATACGCAACGCATGACGGTGCTGGGCGGCGGCCAGGGCGCACAACC CGCGCTCGGCAAAGGCCAGCGCAAAGCGCCGGCCGCGGCCAACGGCCAGGTGCGCGTGGCCGGCCAGCCAGGCCGTCCGA ACCCCGCTAACGCGCTGACGCCCGAAGCCGCGGCGACCACCACGTACGCCGATCCCTATGCGAGCAAGCGCGGCGTCTAT CGCTCTCCGTGGTGA
Upstream 100 bases:
>100_bases ACTTTGCACTGTGGCCGTGCCGGCAAGCGTTTTGGCGGCTACACGCGTACTGGTTGGCGCACGATAGCTTTATCCCGACA GCATCTCCCTGGGGAACAAG
Downstream 100 bases:
>100_bases TATCAGCTTCATGATCAGGCCGCGTGCCGGATCAATCCGGCGCGGCTTCCTCCGCCGTGGCCGGTTTGCGTCGCCGCCGG CCCGCGGCTCCTGAAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTTSLRHTASWMFFAIASCALPAFAQNAAPNPAAAAPAATAANDYGVNAQLPANRRTAHRNSEQALLGAPNPYGTDNAQD NTDDAQRTALLDTQRMTVLGGGQGAQPALGKGQRKAPAAANGQVRVAGQPGRPNPANALTPEAAATTTYADPYASKRGVY RSPW
Sequences:
>Translated_164_residues MTTSLRHTASWMFFAIASCALPAFAQNAAPNPAAAAPAATAANDYGVNAQLPANRRTAHRNSEQALLGAPNPYGTDNAQD NTDDAQRTALLDTQRMTVLGGGQGAQPALGKGQRKAPAAANGQVRVAGQPGRPNPANALTPEAAATTTYADPYASKRGVY RSPW >Mature_163_residues TTSLRHTASWMFFAIASCALPAFAQNAAPNPAAAAPAATAANDYGVNAQLPANRRTAHRNSEQALLGAPNPYGTDNAQDN TDDAQRTALLDTQRMTVLGGGQGAQPALGKGQRKAPAAANGQVRVAGQPGRPNPANALTPEAAATTTYADPYASKRGVYR SPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16942; Mature: 16811
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSLRHTASWMFFAIASCALPAFAQNAAPNPAAAAPAATAANDYGVNAQLPANRRTAHR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NSEQALLGAPNPYGTDNAQDNTDDAQRTALLDTQRMTVLGGGQGAQPALGKGQRKAPAAA CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC NGQVRVAGQPGRPNPANALTPEAAATTTYADPYASKRGVYRSPW CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTSLRHTASWMFFAIASCALPAFAQNAAPNPAAAAPAATAANDYGVNAQLPANRRTAHR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NSEQALLGAPNPYGTDNAQDNTDDAQRTALLDTQRMTVLGGGQGAQPALGKGQRKAPAAA CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC NGQVRVAGQPGRPNPANALTPEAAATTTYADPYASKRGVYRSPW CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA