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The map label for this gene is rhaS [C]

Identifier: 91781976

GI number: 91781976

Start: 666335

End: 667327

Strand: Direct

Name: rhaS [C]

Synonym: Bxe_A3868

Alternate gene names: 91781976

Gene position: 666335-667327 (Clockwise)

Preceding gene: 91781975

Following gene: 91781977

Centisome position: 13.61

GC content: 64.85

Gene sequence:

>993_bases
ATGACTATGACCTGCGCGAGTCTCGAGTCTGCAATGCTGCGCTGGGTGCACGCTCCGAACAAGGGTATGCGTCGCATCGC
GATACTGATGTTCAACGACTGCTCGCTGCAGGGCGCCGGAGTCGTTGCCGAGGTGTTTCAGGCCGCGAACGAAATGGCTT
CGTCCGGCGCGGGCGGCTGGTTATATGACGTTTCCTTCCTGTCGGCCGACGGCGGCATGGTGACTTCGTCGTCCGCGCTG
CGGGTCTGGACAGACGGACTCGACGCGCGGCATTACGGCGGTTTCGATGCGTTGTATGTCGCGGGCGGTAAAGGTGCACT
CGCCGCCGCAAGCGACGAGCGGCTGATTGCGTGGCTGCGCCGCGTACGCCGCAATACCGGCATGATCCGGCCGATCGCGG
AAGGCCGCGCGCTGCTCGATGCGGCCTATGTGCCGGATAGCAGCAGGGAAGCCGGCGATGCACAGGCGCAGCCGATACCG
GCGCGCCAACCGGAACAGACCGCCGACGCGGGCGATCGCCTCGAATCGATGAGAAGCGCGCTCGCCATGATCAAGCGCGA
TCTCGGCAGCGCCACGGCACGCACGGTGGCCGAGCGCCTGCTGGCCGATTCGTGCTCGAATCTCGCGCCGCTGCTCGGCG
AAGACGGCGGCCTGAGCCCCGGCGACAAGGTGCGCGCGGCCGCCCGCTGGCTGCAAGAGAATTGTCAGCAGGCGATATCG
ATTGCCGACGCGGCGCAGTTCGCCGCCATGAGCGAACGCAACTTTCTGCGCCGCTTCAAGATGGAAATGGGCATCACGCC
CTCGAGTTTTCTGTTGCACGAGCGCCTTGCGGTGACCTGCAGCCTGTTGACCGAATCCGAATTGCCGGTCGACAAGATCG
CGCGGCGTACCGGCATGGGCAATGGCGACCGCCTGGCCAAGGTGTTTCGCAAGCGGATGAGAATTTCGCCGACCGAATTT
CGGATTCAAAGCCGCCGACTGGTCGGCGAATAG

Upstream 100 bases:

>100_bases
GGCTAAATACTTGATTGGCGGTGACTATGATGCGCTGCACAGAGCCGGCCTCTCTGCGGCCGTCCCGGGTGAAGAGTTAG
ATCCGTTTTCTGGTGAGAGG

Downstream 100 bases:

>100_bases
CGCGACGGGGCCAGCCGGAGGGCCGTGCGGCAACGCGGCATCCGGTCCGTTATTCCGCCGATCTTTGCGAATTATAAGGA
ATGCGAATATGTTGACTCAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Activator FtrA; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; ThiJ/PfpI Domain-Containing Protein; AraC Family Regulatory Protein; AraC Family Transcription Regulator Protein; DJ-1/PfpI Family; ADPA Family Transcriptional Regulator; GATase1_AraC_1 Family Transcriptional Regulator

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTMTCASLESAMLRWVHAPNKGMRRIAILMFNDCSLQGAGVVAEVFQAANEMASSGAGGWLYDVSFLSADGGMVTSSSAL
RVWTDGLDARHYGGFDALYVAGGKGALAAASDERLIAWLRRVRRNTGMIRPIAEGRALLDAAYVPDSSREAGDAQAQPIP
ARQPEQTADAGDRLESMRSALAMIKRDLGSATARTVAERLLADSCSNLAPLLGEDGGLSPGDKVRAAARWLQENCQQAIS
IADAAQFAAMSERNFLRRFKMEMGITPSSFLLHERLAVTCSLLTESELPVDKIARRTGMGNGDRLAKVFRKRMRISPTEF
RIQSRRLVGE

Sequences:

>Translated_330_residues
MTMTCASLESAMLRWVHAPNKGMRRIAILMFNDCSLQGAGVVAEVFQAANEMASSGAGGWLYDVSFLSADGGMVTSSSAL
RVWTDGLDARHYGGFDALYVAGGKGALAAASDERLIAWLRRVRRNTGMIRPIAEGRALLDAAYVPDSSREAGDAQAQPIP
ARQPEQTADAGDRLESMRSALAMIKRDLGSATARTVAERLLADSCSNLAPLLGEDGGLSPGDKVRAAARWLQENCQQAIS
IADAAQFAAMSERNFLRRFKMEMGITPSSFLLHERLAVTCSLLTESELPVDKIARRTGMGNGDRLAKVFRKRMRISPTEF
RIQSRRLVGE
>Mature_329_residues
TMTCASLESAMLRWVHAPNKGMRRIAILMFNDCSLQGAGVVAEVFQAANEMASSGAGGWLYDVSFLSADGGMVTSSSALR
VWTDGLDARHYGGFDALYVAGGKGALAAASDERLIAWLRRVRRNTGMIRPIAEGRALLDAAYVPDSSREAGDAQAQPIPA
RQPEQTADAGDRLESMRSALAMIKRDLGSATARTVAERLLADSCSNLAPLLGEDGGLSPGDKVRAAARWLQENCQQAISI
ADAAQFAAMSERNFLRRFKMEMGITPSSFLLHERLAVTCSLLTESELPVDKIARRTGMGNGDRLAKVFRKRMRISPTEFR
IQSRRLVGE

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35743; Mature: 35612

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTCASLESAMLRWVHAPNKGMRRIAILMFNDCSLQGAGVVAEVFQAANEMASSGAGGW
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCE
LYDVSFLSADGGMVTSSSALRVWTDGLDARHYGGFDALYVAGGKGALAAASDERLIAWLR
EEEEEEEECCCCEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHH
RVRRNTGMIRPIAEGRALLDAAYVPDSSREAGDAQAQPIPARQPEQTADAGDRLESMRSA
HHHHCCCCCCCHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LAMIKRDLGSATARTVAERLLADSCSNLAPLLGEDGGLSPGDKVRAAARWLQENCQQAIS
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IADAAQFAAMSERNFLRRFKMEMGITPSSFLLHERLAVTCSLLTESELPVDKIARRTGMG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
NGDRLAKVFRKRMRISPTEFRIQSRRLVGE
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TMTCASLESAMLRWVHAPNKGMRRIAILMFNDCSLQGAGVVAEVFQAANEMASSGAGGW
CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCE
LYDVSFLSADGGMVTSSSALRVWTDGLDARHYGGFDALYVAGGKGALAAASDERLIAWLR
EEEEEEEECCCCEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHH
RVRRNTGMIRPIAEGRALLDAAYVPDSSREAGDAQAQPIPARQPEQTADAGDRLESMRSA
HHHHCCCCCCCHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LAMIKRDLGSATARTVAERLLADSCSNLAPLLGEDGGLSPGDKVRAAARWLQENCQQAIS
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IADAAQFAAMSERNFLRRFKMEMGITPSSFLLHERLAVTCSLLTESELPVDKIARRTGMG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
NGDRLAKVFRKRMRISPTEFRIQSRRLVGE
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA