| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781941
Identifier: 91781941
GI number: 91781941
Start: 623318
End: 624229
Strand: Reverse
Name: 91781941
Synonym: Bxe_A3902
Alternate gene names: NA
Gene position: 624229-623318 (Counterclockwise)
Preceding gene: 91781945
Following gene: 91781939
Centisome position: 12.75
GC content: 62.39
Gene sequence:
>912_bases GTGCGGACTGCTACCATCATTGGATGCGGCAATCGATCGGGTTGCCGAACGCCTCTCTACCGCCATCTACACGTCTACAT GATTCCGCCGACCATCCCCGACCTCATTACCCGCGCCGCCGATCATCCGTTTCTCGGCGCGCATCTGATGATGGGGCACG GCTTGCATCACGACGTCGCGCTGGCGCAGTTCAACGGCCTCGAACTGGCCAGCGGTTATGAGCCGATCTTCGATATCAGC GTGCATGCGCTCGCGCAGTCGCTCTCGTCGGGGGTCGAAGGTGTGGACCGTTTCGGCGACGAACTCGGCTTTCAGGCCGT CACGCACCGGCTCGACGCCGCGCCGTCCGACGTGTTCGATCCGTTCGACCGGATCGCCGACGATCGGGATCTCGTCGCGC TCGACCGCATGTCACGCGCGCTGCACGCCATCAATTTCTTCGGCGCGCAGCGGCATGGGCTGCTCTTTCTGCGTGTGCAC GAGCGGCTGCTCAAGAGTGTGAAATACGACCACGGCCGGCATTTTTCGACCGTGCTGGTGTCGTTCGGATTGAACCCGTC GCGGGTGGTGATCGAGTTGCCGGCGGCGGCGGTCGCGCACAAGACCTTTCTCGGCTATCTGACCAAGAGCTATCAGCACT ATGGCTTCAAGGTGGCCGGCAACCTCTCCAACGCGGGGCAGATTCTGTCGGTCTCGGAAACCGCGCGGCTCGACTTCCTC AAGATGGATGCGGGCACCGCTTTGCGCGACGCGACGGTCAAACCGCTGGTCGGTTACGCCGGCCGCCTGCGGATTCCGTT GATCTTCAATCGTGTAGTGGATGAAGCGCAGTTCGAGGCTTTGCAGCAGTACGACGTGCGCTTCGTGCAAGGGCCGCTGT TCAACGCGCATTATCACGACCGGGCGGTTTGA
Upstream 100 bases:
>100_bases TTAACGTATACCCTGAAAACCCGTCTCAAAACCGCGGGACCGCCCGTAGATACAAGGGGCGGGCGGATAACGTTATGAGC AATTTGTTCATGTGAGCGCG
Downstream 100 bases:
>100_bases GGCACGTGGATTGAGCCCGGCGAAGCGGCCGCTCGCGCCGCCGCCGCTTCAGCCCGTATCGCCTAACCGCCGCGCAAGCG CCATCAGCCGCGGCGCGACG
Product: diguanylate phosphodiesterase
Products: NA
Alternate protein names: EAL Domain-Containing Protein; Signalling Protein EAL; Sensory Transduction Protein Kinase; EAL Domain Protein; Signal Transduction Protein Eal Domain; Signaling Protein
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MRTATIIGCGNRSGCRTPLYRHLHVYMIPPTIPDLITRAADHPFLGAHLMMGHGLHHDVALAQFNGLELASGYEPIFDIS VHALAQSLSSGVEGVDRFGDELGFQAVTHRLDAAPSDVFDPFDRIADDRDLVALDRMSRALHAINFFGAQRHGLLFLRVH ERLLKSVKYDHGRHFSTVLVSFGLNPSRVVIELPAAAVAHKTFLGYLTKSYQHYGFKVAGNLSNAGQILSVSETARLDFL KMDAGTALRDATVKPLVGYAGRLRIPLIFNRVVDEAQFEALQQYDVRFVQGPLFNAHYHDRAV
Sequences:
>Translated_303_residues MRTATIIGCGNRSGCRTPLYRHLHVYMIPPTIPDLITRAADHPFLGAHLMMGHGLHHDVALAQFNGLELASGYEPIFDIS VHALAQSLSSGVEGVDRFGDELGFQAVTHRLDAAPSDVFDPFDRIADDRDLVALDRMSRALHAINFFGAQRHGLLFLRVH ERLLKSVKYDHGRHFSTVLVSFGLNPSRVVIELPAAAVAHKTFLGYLTKSYQHYGFKVAGNLSNAGQILSVSETARLDFL KMDAGTALRDATVKPLVGYAGRLRIPLIFNRVVDEAQFEALQQYDVRFVQGPLFNAHYHDRAV >Mature_303_residues MRTATIIGCGNRSGCRTPLYRHLHVYMIPPTIPDLITRAADHPFLGAHLMMGHGLHHDVALAQFNGLELASGYEPIFDIS VHALAQSLSSGVEGVDRFGDELGFQAVTHRLDAAPSDVFDPFDRIADDRDLVALDRMSRALHAINFFGAQRHGLLFLRVH ERLLKSVKYDHGRHFSTVLVSFGLNPSRVVIELPAAAVAHKTFLGYLTKSYQHYGFKVAGNLSNAGQILSVSETARLDFL KMDAGTALRDATVKPLVGYAGRLRIPLIFNRVVDEAQFEALQQYDVRFVQGPLFNAHYHDRAV
Specific function: Unknown
COG id: COG2200
COG function: function code T; FOG: EAL domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33608; Mature: 33608
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTATIIGCGNRSGCRTPLYRHLHVYMIPPTIPDLITRAADHPFLGAHLMMGHGLHHDVA CCCEEEEECCCCCCCCCCHHHCEEEEECCCCHHHHHHHHCCCCCHHHHHHHCCCCCHHHH LAQFNGLELASGYEPIFDISVHALAQSLSSGVEGVDRFGDELGFQAVTHRLDAAPSDVFD HHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC PFDRIADDRDLVALDRMSRALHAINFFGAQRHGLLFLRVHERLLKSVKYDHGRHFSTVLV HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHE SFGLNPSRVVIELPAAAVAHKTFLGYLTKSYQHYGFKVAGNLSNAGQILSVSETARLDFL ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECHHHCEEEE KMDAGTALRDATVKPLVGYAGRLRIPLIFNRVVDEAQFEALQQYDVRFVQGPLFNAHYHD EECCCCCHHHCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCC RAV CCC >Mature Secondary Structure MRTATIIGCGNRSGCRTPLYRHLHVYMIPPTIPDLITRAADHPFLGAHLMMGHGLHHDVA CCCEEEEECCCCCCCCCCHHHCEEEEECCCCHHHHHHHHCCCCCHHHHHHHCCCCCHHHH LAQFNGLELASGYEPIFDISVHALAQSLSSGVEGVDRFGDELGFQAVTHRLDAAPSDVFD HHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC PFDRIADDRDLVALDRMSRALHAINFFGAQRHGLLFLRVHERLLKSVKYDHGRHFSTVLV HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHE SFGLNPSRVVIELPAAAVAHKTFLGYLTKSYQHYGFKVAGNLSNAGQILSVSETARLDFL ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECHHHCEEEE KMDAGTALRDATVKPLVGYAGRLRIPLIFNRVVDEAQFEALQQYDVRFVQGPLFNAHYHD EECCCCCHHHCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCC RAV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA