| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is mbeA [H]
Identifier: 91781907
GI number: 91781907
Start: 589351
End: 590610
Strand: Direct
Name: mbeA [H]
Synonym: Bxe_A3938
Alternate gene names: 91781907
Gene position: 589351-590610 (Clockwise)
Preceding gene: 91781906
Following gene: 91781908
Centisome position: 12.04
GC content: 38.57
Gene sequence:
>1260_bases ATGCTAGCGAACTGTTTTGATTCTGGAACCAGTGGAGGTGATGCACCTGTTCGATATCTTTTAGGCAATAAAGACCATAA AGGAAGCGAACGAAGTGTTAAGCCAAAATTATTTCGAGGCGATCCAGAATCCACGAAAGACTTGATAGATAGTATAAATA ATAAACAAAAATATACTTCAGGAGTCCTTGCATTTCGTGAAAATGAAGTCCCTTCTGTCAAACAAATGCACCAAATTTGT GACGAGTTTGAGCGCTATATGTTTGGTGGGTTAAGTAAAGATAGAGTTAATATTTTATGGGTGCTTCATAATGATAAGGG TCGTCCTGAATTGCATTTTGTTGTGCCAAAAATAGACCTAAAATCGGGTAAGCAACTAAACATTTCTCCACCTGGTAAGC AAAATCAAGACTACTATCGATTGTTTGGTGCTTACATTAATGACAAGTTTGGATGGGAGCAAGTTAGTCCAAAAAAGAAG TGGGATTTGAAAGCTGCTGAGTATAAAAGTGAAACTGTTCCAGCTTTATACAAAAGAGCACTTTGCAAGCAAATCAACAA TAATTATGAAACAGGGATGTTTAAGGATAGAAATGATTTGATCAAATGGCTTGAGCAAAATAAAATTCAGGTTCTAAAGC AAGCTGATGACTTCATAACAATTGGAGTGGGTGGCAATAAACTACGCATGTATGGGGAAATATTTAAGCAAAATCCAGAT ATGTCAGTAGGGAAACCCTATGTGTTCAATCAACATGAAAAAAACAGATTGGAGCATTATAGAGTTGAGCGCGTAGCTTA CTTTGATAAGCGTTTTAATACTCCCCCAAAACCTAGATTTACAGCATCTCCACAAGGCAAAACAACTGTAAAGCCTCAAG TTTTCCAGACTGTAGCCGATAGAATTAAGGAAAGAGAGGTCGCTAGCATGGTTCAAAACATGGCTAGCATTGGGGGTGAT GTAGCTGATGTGATGCCAAAAGAGCAAAAGCCATCATCTGGCGTGTCTTCTGGTGGGGGTTCTTCTGGTGGGGCTGATAC TTCACTTCAAAAAGTAGCGCTTTCTTTAAGAAGAAACGATATTTTGAGGCAGTTAATTGATGCAACGCCTTCCCAAGTGG CTGAATTGCAAAATGAGCTTACTAATATAGATATTGCTTTGGGACGCTTGAAATTGCAGGAAATGGAAGAGGCTGGGCGT GAAATGGATAAACTTTATGAGTTATATAAAAAGCCTCAGATAGATGAGGCACCTACTTAA
Upstream 100 bases:
>100_bases CTAATTTACTTCATATGTCACTTTTACATGAGGTAAGTGACATAGCAAAAACGCTCAAGCAGTTGAGGAAAAACTTTGAT AAAGGTGTTGAGATTTAAGG
Downstream 100 bases:
>100_bases AATGTAATAAATTGCGACTAAATAGTGACATATCATGTTCACGATGTAAAATATACATGCATACTAATAAAGGAGAAAAA AATGCACAATCAAGCTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: DNA nickase; Mobilization protein mbeA [H]
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLANCFDSGTSGGDAPVRYLLGNKDHKGSERSVKPKLFRGDPESTKDLIDSINNKQKYTSGVLAFRENEVPSVKQMHQIC DEFERYMFGGLSKDRVNILWVLHNDKGRPELHFVVPKIDLKSGKQLNISPPGKQNQDYYRLFGAYINDKFGWEQVSPKKK WDLKAAEYKSETVPALYKRALCKQINNNYETGMFKDRNDLIKWLEQNKIQVLKQADDFITIGVGGNKLRMYGEIFKQNPD MSVGKPYVFNQHEKNRLEHYRVERVAYFDKRFNTPPKPRFTASPQGKTTVKPQVFQTVADRIKEREVASMVQNMASIGGD VADVMPKEQKPSSGVSSGGGSSGGADTSLQKVALSLRRNDILRQLIDATPSQVAELQNELTNIDIALGRLKLQEMEEAGR EMDKLYELYKKPQIDEAPT
Sequences:
>Translated_419_residues MLANCFDSGTSGGDAPVRYLLGNKDHKGSERSVKPKLFRGDPESTKDLIDSINNKQKYTSGVLAFRENEVPSVKQMHQIC DEFERYMFGGLSKDRVNILWVLHNDKGRPELHFVVPKIDLKSGKQLNISPPGKQNQDYYRLFGAYINDKFGWEQVSPKKK WDLKAAEYKSETVPALYKRALCKQINNNYETGMFKDRNDLIKWLEQNKIQVLKQADDFITIGVGGNKLRMYGEIFKQNPD MSVGKPYVFNQHEKNRLEHYRVERVAYFDKRFNTPPKPRFTASPQGKTTVKPQVFQTVADRIKEREVASMVQNMASIGGD VADVMPKEQKPSSGVSSGGGSSGGADTSLQKVALSLRRNDILRQLIDATPSQVAELQNELTNIDIALGRLKLQEMEEAGR EMDKLYELYKKPQIDEAPT >Mature_419_residues MLANCFDSGTSGGDAPVRYLLGNKDHKGSERSVKPKLFRGDPESTKDLIDSINNKQKYTSGVLAFRENEVPSVKQMHQIC DEFERYMFGGLSKDRVNILWVLHNDKGRPELHFVVPKIDLKSGKQLNISPPGKQNQDYYRLFGAYINDKFGWEQVSPKKK WDLKAAEYKSETVPALYKRALCKQINNNYETGMFKDRNDLIKWLEQNKIQVLKQADDFITIGVGGNKLRMYGEIFKQNPD MSVGKPYVFNQHEKNRLEHYRVERVAYFDKRFNTPPKPRFTASPQGKTTVKPQVFQTVADRIKEREVASMVQNMASIGGD VADVMPKEQKPSSGVSSGGGSSGGADTSLQKVALSLRRNDILRQLIDATPSQVAELQNELTNIDIALGRLKLQEMEEAGR EMDKLYELYKKPQIDEAPT
Specific function: Relaxase involved in plasmid ColE1 conjugative mobilization and is thus essential to promote the specific transfer of the plasmid during conjugation. First catalyzes the specific cleavage of one of the DNA strands at oriT, forming a covalent 5'-phosphotyr
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli mbaA and mbkA [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005094 [H]
Pfam domain/function: PF03432 Relaxase [H]
EC number: =5.99.1.2 [H]
Molecular weight: Translated: 47563; Mature: 47563
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANCFDSGTSGGDAPVRYLLGNKDHKGSERSVKPKLFRGDPESTKDLIDSINNKQKYTS CCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHH GVLAFRENEVPSVKQMHQICDEFERYMFGGLSKDRVNILWVLHNDKGRPELHFVVPKIDL HHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEC KSGKQLNISPPGKQNQDYYRLFGAYINDKFGWEQVSPKKKWDLKAAEYKSETVPALYKRA CCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHCCCCHHHHHHHH LCKQINNNYETGMFKDRNDLIKWLEQNKIQVLKQADDFITIGVGGNKLRMYGEIFKQNPD HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCC MSVGKPYVFNQHEKNRLEHYRVERVAYFDKRFNTPPKPRFTASPQGKTTVKPQVFQTVAD CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RIKEREVASMVQNMASIGGDVADVMPKEQKPSSGVSSGGGSSGGADTSLQKVALSLRRND HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILRQLIDATPSQVAELQNELTNIDIALGRLKLQEMEEAGREMDKLYELYKKPQIDEAPT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLANCFDSGTSGGDAPVRYLLGNKDHKGSERSVKPKLFRGDPESTKDLIDSINNKQKYTS CCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHH GVLAFRENEVPSVKQMHQICDEFERYMFGGLSKDRVNILWVLHNDKGRPELHFVVPKIDL HHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEC KSGKQLNISPPGKQNQDYYRLFGAYINDKFGWEQVSPKKKWDLKAAEYKSETVPALYKRA CCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHCCCCHHHHHHHH LCKQINNNYETGMFKDRNDLIKWLEQNKIQVLKQADDFITIGVGGNKLRMYGEIFKQNPD HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCC MSVGKPYVFNQHEKNRLEHYRVERVAYFDKRFNTPPKPRFTASPQGKTTVKPQVFQTVAD CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RIKEREVASMVQNMASIGGDVADVMPKEQKPSSGVSSGGGSSGGADTSLQKVALSLRRND HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILRQLIDATPSQVAELQNELTNIDIALGRLKLQEMEEAGREMDKLYELYKKPQIDEAPT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2671664 [H]