| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781901
Identifier: 91781901
GI number: 91781901
Start: 585227
End: 586225
Strand: Direct
Name: 91781901
Synonym: Bxe_A3944
Alternate gene names: NA
Gene position: 585227-586225 (Clockwise)
Preceding gene: 91781900
Following gene: 91781904
Centisome position: 11.95
GC content: 35.94
Gene sequence:
>999_bases ATGGCAAATCAAGTATTAGACACATTCAATGAGCATCTACTCAATAAAACATATTCAACCAACTCATTTGAAGAAGGTTT GAAGGTACGAAAAAAGCAAGATGCTATTAGCTACAACTATGTTGGACTCAATAAACCACTTACAAAGTACATTGCCCTTG ATTTGGATAAGGGGGTTGAATCCACTTACATGTTTGAAAAAAAGAATCTACCTGTTCCTACGTTAATCGTTATCAATCGA GAAACGGGAAACTGTCACTATCTGTATGGGCTAAAAAAGCCAGTATCTTTTTATAAAAATTCTCGATTACGCCCACAAAG CTACCTCAAACAAACAACCTTAGCACTAACGCATGAACTTGAAGCTGATATTGCATATGCGCATACAATTGTAAAAAATC CCAATTCTAAATATTGGAAAATACTTGAAAACGATGTTTATTACGATTTGGAAGATTTTGAAGAGTATTTAGATATTAAT AAATTTGACGCAAAACAATCAGTTGTATTTGATGTGGCTGTAGGTGGGCGAAATGTTGCTTTATTTGATAATTTAAGGTT TTGGGCGTATAAAGAAATTAATATTGTAGATTACTTAAGCTATGAAGCTTGGCTTGACAGTGTAAGTGCAAAAGCAACCC AACTAAACAACTATGAAGCACCACTAGACCTAAAGGAAGTAGGGCACACAGCCAAATCAGTTGCTAAATGGGTTTGGAGG AACCAGGATAGGGTAAAGGGTGGTGTTAATCGTGGCGTCATGTCTCACCTAGGTTTAATCAATGATGGGATGAGCCTTGA GCAAAAGCAAAGTGCCTCAGCATTGTTCACCAATGACTCTAGGAAATCTGGCACGCGAGGAAAAATCACTACTGCAATAA TTAAATTAAAATGTAATGGTGCAAAGATTACACAAGAATCCATTTCAATAACTTCTGATGTATCGGTTCGCACCATTAGA AAATATTGGGATGAATTTTTGCCAATGATTAATGAATGA
Upstream 100 bases:
>100_bases TACCGATATTATCAACAAAACTCTAGCGAAGTTTCAAAGTTAATAATATCGTAAAATAGAAAATTGTCAATACTTGCCAT AAAAATAAAAAGGCAACTAT
Downstream 100 bases:
>100_bases AAACTTATGTAAAAAAGAGGAAGTACGGTGTACATCAGATAATTACTTTTATAGTTCGCTTTTATGCCTGTCAGCAGACA AAGGCTAAGAAAGCGAGACT
Product: putative replicase
Products: NA
Alternate protein names: Replicase; Rep Protein; RepA Protein; Replication Initiation Protein A; Replication Protein A; Replication Protein; Replication Primase; Plasmid Replicase Protein; Plasmid Replication Protein RepA; Replication Protein RepA; Replication Primase Protein
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MANQVLDTFNEHLLNKTYSTNSFEEGLKVRKKQDAISYNYVGLNKPLTKYIALDLDKGVESTYMFEKKNLPVPTLIVINR ETGNCHYLYGLKKPVSFYKNSRLRPQSYLKQTTLALTHELEADIAYAHTIVKNPNSKYWKILENDVYYDLEDFEEYLDIN KFDAKQSVVFDVAVGGRNVALFDNLRFWAYKEINIVDYLSYEAWLDSVSAKATQLNNYEAPLDLKEVGHTAKSVAKWVWR NQDRVKGGVNRGVMSHLGLINDGMSLEQKQSASALFTNDSRKSGTRGKITTAIIKLKCNGAKITQESISITSDVSVRTIR KYWDEFLPMINE
Sequences:
>Translated_332_residues MANQVLDTFNEHLLNKTYSTNSFEEGLKVRKKQDAISYNYVGLNKPLTKYIALDLDKGVESTYMFEKKNLPVPTLIVINR ETGNCHYLYGLKKPVSFYKNSRLRPQSYLKQTTLALTHELEADIAYAHTIVKNPNSKYWKILENDVYYDLEDFEEYLDIN KFDAKQSVVFDVAVGGRNVALFDNLRFWAYKEINIVDYLSYEAWLDSVSAKATQLNNYEAPLDLKEVGHTAKSVAKWVWR NQDRVKGGVNRGVMSHLGLINDGMSLEQKQSASALFTNDSRKSGTRGKITTAIIKLKCNGAKITQESISITSDVSVRTIR KYWDEFLPMINE >Mature_331_residues ANQVLDTFNEHLLNKTYSTNSFEEGLKVRKKQDAISYNYVGLNKPLTKYIALDLDKGVESTYMFEKKNLPVPTLIVINRE TGNCHYLYGLKKPVSFYKNSRLRPQSYLKQTTLALTHELEADIAYAHTIVKNPNSKYWKILENDVYYDLEDFEEYLDINK FDAKQSVVFDVAVGGRNVALFDNLRFWAYKEINIVDYLSYEAWLDSVSAKATQLNNYEAPLDLKEVGHTAKSVAKWVWRN QDRVKGGVNRGVMSHLGLINDGMSLEQKQSASALFTNDSRKSGTRGKITTAIIKLKCNGAKITQESISITSDVSVRTIRK YWDEFLPMINE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38033; Mature: 37901
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANQVLDTFNEHLLNKTYSTNSFEEGLKVRKKQDAISYNYVGLNKPLTKYIALDLDKGVE CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHEEEECCCCCC STYMFEKKNLPVPTLIVINRETGNCHYLYGLKKPVSFYKNSRLRPQSYLKQTTLALTHEL HHEEEECCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHH EADIAYAHTIVKNPNSKYWKILENDVYYDLEDFEEYLDINKFDAKQSVVFDVAVGGRNVA HHHHHHHHHHHCCCCCCEEEEECCCCEECHHHHHHHHCCCCCCCCCEEEEEEEECCCEEE LFDNLRFWAYKEINIVDYLSYEAWLDSVSAKATQLNNYEAPLDLKEVGHTAKSVAKWVWR EEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHC NQDRVKGGVNRGVMSHLGLINDGMSLEQKQSASALFTNDSRKSGTRGKITTAIIKLKCNG CCHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCCCCCCCEEEEEEEEEECC AKITQESISITSDVSVRTIRKYWDEFLPMINE CEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANQVLDTFNEHLLNKTYSTNSFEEGLKVRKKQDAISYNYVGLNKPLTKYIALDLDKGVE CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHEEEECCCCCC STYMFEKKNLPVPTLIVINRETGNCHYLYGLKKPVSFYKNSRLRPQSYLKQTTLALTHEL HHEEEECCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHH EADIAYAHTIVKNPNSKYWKILENDVYYDLEDFEEYLDINKFDAKQSVVFDVAVGGRNVA HHHHHHHHHHHCCCCCCEEEEECCCCEECHHHHHHHHCCCCCCCCCEEEEEEEECCCEEE LFDNLRFWAYKEINIVDYLSYEAWLDSVSAKATQLNNYEAPLDLKEVGHTAKSVAKWVWR EEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHC NQDRVKGGVNRGVMSHLGLINDGMSLEQKQSASALFTNDSRKSGTRGKITTAIIKLKCNG CCHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCCCCCCCEEEEEEEEEECC AKITQESISITSDVSVRTIRKYWDEFLPMINE CEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA